FFCP PHASE1:Mm9::chr19:10599641..10599671,-: Difference between revisions
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{{FFCP|EntrezGene=66072|HGNC=|UniProt=Q8C6I2|association_with_transcript=27bp_to_ENSMUST00000025570,NM_025333,uc008gpt.2,uc008gpu.2,uc008gpv.1_5end|description=CAGE_peak_2_at_Sdhaf2_5end|id=chr19:10599641..10599671,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.04e-07!63;UBERON:0000955!2.20e-07!50;UBERON:0006238!2.20e-07!50;UBERON:0001049!3.05e-07!52;UBERON:0005068!3.05e-07!52;UBERON:0006241!3.05e-07!52;UBERON:0007135!3.05e-07!52;UBERON:0000153!5.43e-07!94;UBERON:0002616!5.62e-07!49;UBERON:0002021!6.32e-07!10;UBERON:0000411!6.32e-07!10;UBERON:0001950!6.32e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.52e-08,54;UBERON:0001049,3.05e-07,52;UBERON:0005068,3.05e-07,52;UBERON:0006241,3.05e-07,52;UBERON:0007135,3.05e-07,52;UBERON:0002021,6.32e-07,10;UBERON:0000411,6.32e-07,10;UBERON:0001950,6.32e-07,10|phase1_expression=7.52699581392532,7.32848356042658,5.91499011206397,6.65421264875026,6.01074875935617,5.54001597309236,7.00837921786577,12.6540856972745,3.23814060948833,2.10658073689794,8.90333434772626,10.3703806693937,9.24483941628511,11.0149707047937,5.3297561890506,8.50396123037269,12.5921138063066,8.67520954735154,7.54129384831563,6.79023442876848,8.58937230525805,5.85816612085223,6.00759515019551,7.1996590257033,5.73523202667925,9.18771142584032,5.59990595006797,6.46413698057667,8.17100703662408,4.53654233567875,5.09980174507201,6.98533740805594,4.30545351309199,0,4.33277429626912,3.65716219788683,3.87921776898501,20.5080499061085,13.2827008569046,22.5115209908733,16.4704816648684,23.9065919735456,22.8189865924642,12.3378881616066,12.5707394712198,14.6837401729345,3.9119567217402,5.23260375313072,5.4921545683618,7.19390626574849,7.27929392451885,2.87505128729943,6.87908684836719,5.07753499407941,3.02484419228218,9.26133969729409,7.44986943840768,8.76642556871652,3.64169629547276,4.7609188134483,6.97214543856797,5.08266798103698,3.55717918444456,4.94944844504769,7.9109309005358,4.2628806896766,4.79360176829448,6.53171119046643,8.08778976006126,6.21027316325777,7.36137364729837,11.4260393761521,9.05561017901615,6.98197555525238,5.46319184803947,5.51531271966013,9.91042928994498,12.5133591323484,11.2132769277058,4.87979264601717,4.7573574673253,3.64639359389732,7.2587579740359,9.00420176050688,16.3494125121187,9.42811473515737,8.54230084794618,7.45597783301202,9.08714319998209,10.58001841495,6.95674772884027,6.0229671388697,2.719885334831,3.77792234146472,7.14754059192436,5.82434953226536,10.5333315098814,11.759692257886,15.5871602761721,10.6001872353102,7.60554466794075,7.69958864485907,5.09610479413291,7.11066703153331,8.44315059943735,8.10751569520315,8.08839112023653,6.16592950482924,14.5005214842416,8.31275978763019,6.41895709034703,7.61163695780353,6.45723392316964,7.68685466818375,9.05433044944927,8.79666139307728,8.15743393523434,12.0017466243527,9.73071607144862,8.41187619726528,8.83366073841574,10.6672555689749,0,13.4679166625312,11.3101221679266,6.64188343542338,6.58983184782562,5.39912457894067,5.33694953706872,14.5296920222678,16.9275223042892,11.4345460422707,19.1206752211504,23.2701066170601,18.0775598766817,17.8465389374533,6.00852246716866,6.84238338355512,8.08712826987759,9.89076722666428,5.72529949035896,7.12696523743766,7.92273371143537,10.5493372485001,8.36848939561333,8.32739181851524,7.77724313845749,10.6068382002996,6.25147179505242,7.18603104637713,6.68614271823006,8.76782929710299,7.50727572909114,9.05455632957633,9.26019613835746,8.95654200683219,4.21327912387941,4.63226232806487,6.53576048609863,6.42089894860056,5.39409937956521,9.54328925743379,5.44512891845984,6.68998387941173,6.32495162838251,6.74348439776183,7.77992864058896,7.47298191149885,8.55711219550098,9.02921052435024,8.35008738322314,9.64919917007193,10.3188554186794,8.85762363818454,17.6643556793867,11.216602749342,5.94753809370836,4.7601101999438,8.95810652247983,7.19933682767359,7.21657783403723,5.84882221407693,9.33987784148455,6.84812254005213,5.69434873853414,8.23494773620054,8.04272668160862,11.5394753783867,8.18849165900304,11.6846523125049,6.26800344636613,6.37252074413975,9.293727146701,6.96915926919346,11.270773567308,6.92414514674068,6.7883370508669,6.10181633045771,6.9560190836683,7.67572769493931,6.27994911365499,7.65062416315163,4.15033677922008,8.5091003915208,7.27268281918851,8.7696223830093,8.92584534109413,7.23531479257251,6.87489799809833,5.75392274901621,4.70192157647603,6.04035109013779,5.75072826109418,7.07067800570156,6.24075346229121,6.56705082662491,7.53469136792031,3.85954817090694,10.1614254591633,6.63219941196697,9.61493361007953,5.26209765903083,8.21415869009757,7.87279409976534,9.75978927632656,4.48807390072937,8.51229778173431,5.75808193086815,6.37819074629948,6.71839590334526,8.97961905702657,6.79850575333104,7.53956419696361,19.5806046174735,4.42587845717133,4.96686143348518,14.4495530989013,17.2301179290539,8.36068221421045,7.57412781613119,4.4171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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66072 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8C6I2 | |||
|association_with_transcript=27bp_to_ENSMUST00000025570,NM_025333,uc008gpt.2,uc008gpu.2,uc008gpv.1_5end | |||
|cluster_id=chr19:10599641..10599671,- | |||
|description=CAGE_peak_2_at_Sdhaf2_5end | |||
|id=chr19:10599641..10599671,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.04e-07!63;UBERON:0000955!2.20e-07!50;UBERON:0006238!2.20e-07!50;UBERON:0001049!3.05e-07!52;UBERON:0005068!3.05e-07!52;UBERON:0006241!3.05e-07!52;UBERON:0007135!3.05e-07!52;UBERON:0000153!5.43e-07!94;UBERON:0002616!5.62e-07!49;UBERON:0002021!6.32e-07!10;UBERON:0000411!6.32e-07!10;UBERON:0001950!6.32e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.52e-08,54;UBERON:0001049,3.05e-07,52;UBERON:0005068,3.05e-07,52;UBERON:0006241,3.05e-07,52;UBERON:0007135,3.05e-07,52;UBERON:0002021,6.32e-07,10;UBERON:0000411,6.32e-07,10;UBERON:0001950,6.32e-07,10 | |||
|phase1_expression=7.52699581392532,7.32848356042658,5.91499011206397,6.65421264875026,6.01074875935617,5.54001597309236,7.00837921786577,12.6540856972745,3.23814060948833,2.10658073689794,8.90333434772626,10.3703806693937,9.24483941628511,11.0149707047937,5.3297561890506,8.50396123037269,12.5921138063066,8.67520954735154,7.54129384831563,6.79023442876848,8.58937230525805,5.85816612085223,6.00759515019551,7.1996590257033,5.73523202667925,9.18771142584032,5.59990595006797,6.46413698057667,8.17100703662408,4.53654233567875,5.09980174507201,6.98533740805594,4.30545351309199,0,4.33277429626912,3.65716219788683,3.87921776898501,20.5080499061085,13.2827008569046,22.5115209908733,16.4704816648684,23.9065919735456,22.8189865924642,12.3378881616066,12.5707394712198,14.6837401729345,3.9119567217402,5.23260375313072,5.4921545683618,7.19390626574849,7.27929392451885,2.87505128729943,6.87908684836719,5.07753499407941,3.02484419228218,9.26133969729409,7.44986943840768,8.76642556871652,3.64169629547276,4.7609188134483,6.97214543856797,5.08266798103698,3.55717918444456,4.94944844504769,7.9109309005358,4.2628806896766,4.79360176829448,6.53171119046643,8.08778976006126,6.21027316325777,7.36137364729837,11.4260393761521,9.05561017901615,6.98197555525238,5.46319184803947,5.51531271966013,9.91042928994498,12.5133591323484,11.2132769277058,4.87979264601717,4.7573574673253,3.64639359389732,7.2587579740359,9.00420176050688,16.3494125121187,9.42811473515737,8.54230084794618,7.45597783301202,9.08714319998209,10.58001841495,6.95674772884027,6.0229671388697,2.719885334831,3.77792234146472,7.14754059192436,5.82434953226536,10.5333315098814,11.759692257886,15.5871602761721,10.6001872353102,7.60554466794075,7.69958864485907,5.09610479413291,7.11066703153331,8.44315059943735,8.10751569520315,8.08839112023653,6.16592950482924,14.5005214842416,8.31275978763019,6.41895709034703,7.61163695780353,6.45723392316964,7.68685466818375,9.05433044944927,8.79666139307728,8.15743393523434,12.0017466243527,9.73071607144862,8.41187619726528,8.83366073841574,10.6672555689749,0,13.4679166625312,11.3101221679266,6.64188343542338,6.58983184782562,5.39912457894067,5.33694953706872,14.5296920222678,16.9275223042892,11.4345460422707,19.1206752211504,23.2701066170601,18.0775598766817,17.8465389374533,6.00852246716866,6.84238338355512,8.08712826987759,9.89076722666428,5.72529949035896,7.12696523743766,7.92273371143537,10.5493372485001,8.36848939561333,8.32739181851524,7.77724313845749,10.6068382002996,6.25147179505242,7.18603104637713,6.68614271823006,8.76782929710299,7.50727572909114,9.05455632957633,9.26019613835746,8.95654200683219,4.21327912387941,4.63226232806487,6.53576048609863,6.42089894860056,5.39409937956521,9.54328925743379,5.44512891845984,6.68998387941173,6.32495162838251,6.74348439776183,7.77992864058896,7.47298191149885,8.55711219550098,9.02921052435024,8.35008738322314,9.64919917007193,10.3188554186794,8.85762363818454,17.6643556793867,11.216602749342,5.94753809370836,4.7601101999438,8.95810652247983,7.19933682767359,7.21657783403723,5.84882221407693,9.33987784148455,6.84812254005213,5.69434873853414,8.23494773620054,8.04272668160862,11.5394753783867,8.18849165900304,11.6846523125049,6.26800344636613,6.37252074413975,9.293727146701,6.96915926919346,11.270773567308,6.92414514674068,6.7883370508669,6.10181633045771,6.9560190836683,7.67572769493931,6.27994911365499,7.65062416315163,4.15033677922008,8.5091003915208,7.27268281918851,8.7696223830093,8.92584534109413,7.23531479257251,6.87489799809833,5.75392274901621,4.70192157647603,6.04035109013779,5.75072826109418,7.07067800570156,6.24075346229121,6.56705082662491,7.53469136792031,3.85954817090694,10.1614254591633,6.63219941196697,9.61493361007953,5.26209765903083,8.21415869009757,7.87279409976534,9.75978927632656,4.48807390072937,8.51229778173431,5.75808193086815,6.37819074629948,6.71839590334526,8.97961905702657,6.79850575333104,7.53956419696361,19.5806046174735,4.42587845717133,4.96686143348518,14.4495530989013,17.2301179290539,8.36068221421045,7.57412781613119,4.41711507182759,5.85658116444958,6.03185513651837,6.21318874676635,8.24355094104858,7.35998980050964,5.26253912177363,6.13737301613755,5.13874111330481,14.1381379225595,7.2389443456217,7.12262414669021,8.1443479676788,8.74341651754438,2.65490276679926,5.58395463156457,6.34879469625977,6.03536255218874,5.90603785761546,6.7635732547664,4.13485269069154,5.45300594216258,1.78248689192361,6.63677191665214,5.27093042874994,6.18813259489121,11.234506989875,8.46287141947158,7.76152102696527,9.21649250635847,11.7044554203901,5.88617098086833,10.0374902567294,7.61162372786498,8.44818149029357,12.4980921809654,5.51320995137405,7.58476763530808,10.4951877352339,8.98662581429522,6.2073618881631,6.56563598980245,6.99554007911642,17.0591277849669,8.54354403989263,7.42992724667601,10.5560880600736,10.7370020492674,10.3887613067979,8.92234875505438,4.75939603982795,5.59805809294632,3.17859939750175,6.68269432610579,7.27572785236611,9.35269548783504,6.804336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| |||
|short_description=p2@Sdhaf2 | |||
}} |
Latest revision as of 20:36, 1 October 2015
Short description: | p2@Sdhaf2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sdhaf2_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENSMUST00000025570, NM_025333, uc008gpt.2, uc008gpu.2, uc008gpv.1_5end |
EntrezGene: | Sdhaf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 8.52e-08 | 54 |
neural tube | 3.05e-07 | 52 |
neural rod | 3.05e-07 | 52 |
future spinal cord | 3.05e-07 | 52 |
neural keel | 3.05e-07 | 52 |
occipital lobe | 6.32e-07 | 10 |
visual cortex | 6.32e-07 | 10 |
neocortex | 6.32e-07 | 10 |