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FFCP PHASE1:Mm9::chr19:10463708..10463723,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:10463708..10463723,+
|DHSsupport=NA
|short_description=p5@Syt7
|DPIdataset=NA
|description=CAGE_peak_5_at_Syt7_5end
|association_with_transcript=128bp_to_ENSMUST00000073899,ENSMUST00000076968,ENSMUST00000169121,NM_018801,NM_173067,NM_173068,uc008gpp.2,uc008gpq.2,uc012bin.1_5end
|EntrezGene=54525
|EntrezGene=54525
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9R0N7,Q8CF96,E9PZA8,Q0D2K7,Q8CF95
|UniProt=Q9R0N7,Q8CF96,E9PZA8,Q0D2K7,Q8CF95
|association_with_transcript=128bp_to_ENSMUST00000073899,ENSMUST00000076968,ENSMUST00000169121,NM_018801,NM_173067,NM_173068,uc008gpp.2,uc008gpq.2,uc012bin.1_5end
|cluster_id=chr19:10463708..10463723,+
|description=CAGE_peak_5_at_Syt7_5end
|id=chr19:10463708..10463723,+
|ontology_enrichment_celltype=CL:0000117!1.32e-12!23;CL:0000337!1.32e-12!23;CL:0000540!2.00e-12!33;CL:0000047!2.00e-12!33;CL:0000031!2.00e-12!33;CL:0000404!2.00e-12!33;CL:0000393!2.66e-08!39;CL:0000211!2.66e-08!39;CL:0000221!1.41e-07!44;CL:0000133!1.41e-07!44;CL:0002319!2.40e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,8.13e-20,23;CL:0000337,8.13e-20,23;CL:0000540,6.48e-15,33;CL:0000047,6.48e-15,33;CL:0000031,6.48e-15,33;CL:0000404,6.48e-15,33;CL:0000393,2.21e-11,39;CL:0000211,2.21e-11,39;CL:0002319,1.31e-09,43;CL:0000221,3.21e-09,44;CL:0000133,3.21e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.83e-24!75;UBERON:0001016!5.83e-24!75;UBERON:0001017!6.37e-24!73;UBERON:0005743!6.37e-24!73;UBERON:0004121!1.79e-22!102;UBERON:0000924!1.79e-22!102;UBERON:0006601!1.79e-22!102;UBERON:0002346!2.67e-22!71;UBERON:0003075!2.67e-22!71;UBERON:0007284!2.67e-22!71;UBERON:0001049!6.62e-22!52;UBERON:0005068!6.62e-22!52;UBERON:0006241!6.62e-22!52;UBERON:0007135!6.62e-22!52;UBERON:0000955!4.78e-21!50;UBERON:0006238!4.78e-21!50;UBERON:0002616!2.63e-20!49;UBERON:0000033!2.67e-20!63;UBERON:0003056!8.23e-18!49;UBERON:0003080!8.37e-18!40;UBERON:0002780!3.29e-17!39;UBERON:0001890!3.29e-17!39;UBERON:0006240!3.29e-17!39;UBERON:0002020!3.88e-17!34;UBERON:0002791!4.50e-14!29;UBERON:0003528!4.50e-14!29;UBERON:0001893!4.50e-14!29;UBERON:0007811!6.51e-10!86;UBERON:0000956!1.59e-09!21;UBERON:0001869!1.59e-09!21;UBERON:0000203!1.59e-09!21;UBERON:0002021!9.12e-09!10;UBERON:0000411!9.12e-09!10;UBERON:0001950!9.12e-09!10;UBERON:0000153!9.08e-08!94;UBERON:0002619!1.90e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-35,54;UBERON:0001017,1.27e-33,73;UBERON:0001049,4.49e-33,52;UBERON:0005068,4.49e-33,52;UBERON:0006241,4.49e-33,52;UBERON:0007135,4.49e-33,52;UBERON:0001016,3.06e-32,75;UBERON:0002346,6.88e-32,64;UBERON:0003075,6.88e-32,64;UBERON:0007284,6.88e-32,64;UBERON:0000955,2.37e-28,47;UBERON:0006238,2.37e-28,47;UBERON:0002020,2.92e-28,34;UBERON:0002616,3.32e-27,46;UBERON:0010371,3.99e-27,73;UBERON:0004121,5.23e-27,95;UBERON:0000924,5.23e-27,95;UBERON:0006601,5.23e-27,95;UBERON:0003080,2.02e-25,40;UBERON:0003056,4.65e-25,49;UBERON:0002780,1.74e-24,39;UBERON:0001890,1.74e-24,39;UBERON:0006240,1.74e-24,39;UBERON:0003528,2.75e-23,29;UBERON:0002791,2.75e-23,29;UBERON:0001893,2.75e-23,29;UBERON:0010314,6.07e-23,92;UBERON:0000956,6.74e-16,21;UBERON:0001869,6.74e-16,21;UBERON:0000203,6.74e-16,21;UBERON:0002021,4.38e-13,10;UBERON:0000411,4.38e-13,10;UBERON:0001950,4.38e-13,10;UBERON:0002619,1.60e-12,17;UBERON:0000025,6.38e-10,114;UBERON:0004111,1.55e-09,122;UBERON:0002420,1.46e-08,8;UBERON:0007245,1.46e-08,8;UBERON:0010009,1.46e-08,8;UBERON:0010011,1.46e-08,8;UBERON:0000454,1.46e-08,8;UBERON:0003076,6.56e-08,12;UBERON:0003057,6.56e-08,12;UBERON:0002240,8.67e-07,6;UBERON:0005174,8.67e-07,6;UBERON:0001137,8.67e-07,6
|phase1_expression=1.44133962394315,0.348975407639361,0.454999239389536,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0.22940928106717,0.57423196411502,2.15380998079537,1.07735616342945,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,8.46385566835253,6.97214543856797,0.677689064138264,0,0,0,0,0,0,2.48855069540346,2.8351247049655,3.36519938162211,5.14171771926846,4.41737081903227,2.69479758272899,1.53352753629178,0,6.60695285996332,12.6410464704336,11.5204899942183,8.44072241473241,8.78281378583133,4.16730696445408,4.74611098302348,5.06486349028512,3.97275444219706,8.54422897873636,7.26095572075425,6.33758115806022,0.454357159999104,0.302286240427142,4.05810284182349,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,0.346970653532272,0.608930956624282,0.461230994512117,0.753613202763113,1.05829836422134,0.125666591329675,0,0,0,0.161766849947409,0,0,0,8.49064311333487,7.54008144528438,0.766371165625774,0,0,0,4.79330046095433,7.32000964509802,3.76963056338593,11.298580812498,12.0186264945255,10.5971902725376,10.5456820994042,0.203678727700633,0,0,1.26265113531884,0,0,0.180062129805349,0.753524089178575,1.42876648217788,1.0249097622788,1.68663104207512,1.81092359517311,0,0,0,0.219195732427575,0,0,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,1.54030738137126,1.46199987425332,1.75640092232841,0.536825675041487,13.4585567081041,4.21908910755066,0.660837565967596,0.264450566663544,0.213288250535234,0.464473343720877,0,0,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0.795825888164603,0.38992817423824,0.898819408654221,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,1.76605648986571,2.22702204525186,0,0,0,1.17131623288992,0.215423397732799,0.477937595905104,1.11399337041197,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,12.5315313404505,0.709700426041343,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0.604647113929502,0,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0,0,0,4.08527526904546,0.18006109403131,0.258717367565509,0.857348140126369,0.886701168211368,1.24858172321449,1.97458824722545,6.08929898229199,0,0,1.54369878638473,0.16488625294148,0.322928853391811,0,0.477489376012546,0.820704498725306,0,2.22510362412612,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0.448549638131936,0.330916980914195,0.388902376688095,0.258319646955462,0.337912250981556,0.704143431874524,0.781226309063701,0.629156066554265,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0.269141569828427,0.503653849092235,0,0,0,0,0.501572104035363,12.9892923801925,14.2700823317225,10.8850147553485,9.10821866421544,19.182310553578,12.8416962556249,16.8755625057951,12.6089936902782,13.5942722695261,13.9795284172991,0,2.39414924040619,0.682934423016537,0.486213434136588,1.04806581313991,1.47074806760011,0.666740183404846,1.64828045791115,2.24643446714271,1.26348605881899,0.760437899670719,0.943131706930381,1.12369808963859,1.02440243847791,0.746661096422973,0,1.62238056322798,0.38581844092741,0,1.03039244094078,1.71434626192708,0.354951612318675,1.1921809497366,1.16277133305863,1.12931256498397,1.35383372626682,1.46342378298218,1.57841826862706,0.543216455383447,1.12228454331548,0.949080144993393,0.985044823755635,0.409231043169689,1.23949472948773,0.192906610981141,1.49886346762768,0.233931608445408,1.93383948643468,1.3390183244819,1.10295709559758,0.231867835620421
|phase1_expression=1.44133962394315,0.348975407639361,0.454999239389536,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0.22940928106717,0.57423196411502,2.15380998079537,1.07735616342945,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,8.46385566835253,6.97214543856797,0.677689064138264,0,0,0,0,0,0,2.48855069540346,2.8351247049655,3.36519938162211,5.14171771926846,4.41737081903227,2.69479758272899,1.53352753629178,0,6.60695285996332,12.6410464704336,11.5204899942183,8.44072241473241,8.78281378583133,4.16730696445408,4.74611098302348,5.06486349028512,3.97275444219706,8.54422897873636,7.26095572075425,6.33758115806022,0.454357159999104,0.302286240427142,4.05810284182349,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,0.346970653532272,0.608930956624282,0.461230994512117,0.753613202763113,1.05829836422134,0.125666591329675,0,0,0,0.161766849947409,0,0,0,8.49064311333487,7.54008144528438,0.766371165625774,0,0,0,4.79330046095433,7.32000964509802,3.76963056338593,11.298580812498,12.0186264945255,10.5971902725376,10.5456820994042,0.203678727700633,0,0,1.26265113531884,0,0,0.180062129805349,0.753524089178575,1.42876648217788,1.0249097622788,1.68663104207512,1.81092359517311,0,0,0,0.219195732427575,0,0,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,1.54030738137126,1.46199987425332,1.75640092232841,0.536825675041487,13.4585567081041,4.21908910755066,0.660837565967596,0.264450566663544,0.213288250535234,0.464473343720877,0,0,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0.795825888164603,0.38992817423824,0.898819408654221,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,1.76605648986571,2.22702204525186,0,0,0,1.17131623288992,0.215423397732799,0.477937595905104,1.11399337041197,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,12.5315313404505,0.709700426041343,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0.604647113929502,0,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0,0,0,4.08527526904546,0.18006109403131,0.258717367565509,0.857348140126369,0.886701168211368,1.24858172321449,1.97458824722545,6.08929898229199,0,0,1.54369878638473,0.16488625294148,0.322928853391811,0,0.477489376012546,0.820704498725306,0,2.22510362412612,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0.448549638131936,0.330916980914195,0.388902376688095,0.258319646955462,0.337912250981556,0.704143431874524,0.781226309063701,0.629156066554265,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0.269141569828427,0.503653849092235,0,0,0,0,0.501572104035363,12.9892923801925,14.2700823317225,10.8850147553485,9.10821866421544,19.182310553578,12.8416962556249,16.8755625057951,12.6089936902782,13.5942722695261,13.9795284172991,0,2.39414924040619,0.682934423016537,0.486213434136588,1.04806581313991,1.47074806760011,0.666740183404846,1.64828045791115,2.24643446714271,1.26348605881899,0.760437899670719,0.943131706930381,1.12369808963859,1.02440243847791,0.746661096422973,0,1.62238056322798,0.38581844092741,0,1.03039244094078,1.71434626192708,0.354951612318675,1.1921809497366,1.16277133305863,1.12931256498397,1.35383372626682,1.46342378298218,1.57841826862706,0.543216455383447,1.12228454331548,0.949080144993393,0.985044823755635,0.409231043169689,1.23949472948773,0.192906610981141,1.49886346762768,0.233931608445408,1.93383948643468,1.3390183244819,1.10295709559758,0.231867835620421
|short_description=p5@Syt7
}}
}}

Latest revision as of 20:31, 1 October 2015

Short description:p5@Syt7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Syt7_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 128bp_to_ENSMUST00000073899, ENSMUST00000076968, ENSMUST00000169121, NM_018801, NM_173067, NM_173068, uc008gpp.2, uc008gpq.2, uc012bin.1_5end
EntrezGene:Syt7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Syt7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D511.30
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E813.46
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.13e-2023
neuroblast (sensu Vertebrata)8.13e-2023
neuron6.48e-1533
neuronal stem cell6.48e-1533
neuroblast6.48e-1533
electrically signaling cell6.48e-1533
electrically responsive cell2.21e-1139
electrically active cell2.21e-1139
neural cell1.31e-0943
ectodermal cell3.21e-0944
neurectodermal cell3.21e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.06e-3554
central nervous system1.27e-3373
neural tube4.49e-3352
neural rod4.49e-3352
future spinal cord4.49e-3352
neural keel4.49e-3352
nervous system3.06e-3275
neurectoderm6.88e-3264
neural plate6.88e-3264
presumptive neural plate6.88e-3264
brain2.37e-2847
future brain2.37e-2847
gray matter2.92e-2834
regional part of brain3.32e-2746
ecto-epithelium3.99e-2773
ectoderm-derived structure5.23e-2795
ectoderm5.23e-2795
presumptive ectoderm5.23e-2795
anterior neural tube2.02e-2540
pre-chordal neural plate4.65e-2549
regional part of forebrain1.74e-2439
forebrain1.74e-2439
future forebrain1.74e-2439
brain grey matter2.75e-2329
regional part of telencephalon2.75e-2329
telencephalon2.75e-2329
structure with developmental contribution from neural crest6.07e-2392
cerebral cortex6.74e-1621
cerebral hemisphere6.74e-1621
pallium6.74e-1621
occipital lobe4.38e-1310
visual cortex4.38e-1310
neocortex4.38e-1310
regional part of cerebral cortex1.60e-1217
tube6.38e-10114
anatomical conduit1.55e-09122
basal ganglion1.46e-088
nuclear complex of neuraxis1.46e-088
aggregate regional part of brain1.46e-088
collection of basal ganglia1.46e-088
cerebral subcortex1.46e-088
posterior neural tube6.56e-0812
chordal neural plate6.56e-0812
spinal cord8.67e-076
dorsal region element8.67e-076
dorsum8.67e-076
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