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FFCP PHASE1:Mm9::chr11:6100148..6100213,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=209586
|EntrezGene=209586
|HGNC=
|HGNC=
|MCL_coexpression_id=1083
|TSSclassifier=NA
|UniProt=Q8R1N4
|UniProt=Q8R1N4
|association_with_transcript=0bp_to_ENSMUST00000109806_5end
|association_with_transcript=0bp_to_ENSMUST00000109806_5end
|cluster_id=chr11:6100148..6100213,-
|description=CAGE_peak_1_at_Nudcd3_5end
|description=CAGE_peak_1_at_Nudcd3_5end
|id=chr11:6100148..6100213,-
|id=chr11:6100148..6100213,-
|ontology_enrichment_celltype=CL:0002319!4.97e-18!43;CL:0000055!9.40e-18!50;CL:0000221!2.28e-17!44;CL:0000133!2.28e-17!44;CL:0000393!1.94e-15!39;CL:0000211!1.94e-15!39;CL:0000540!1.30e-14!33;CL:0000047!1.30e-14!33;CL:0000031!1.30e-14!33;CL:0000404!1.30e-14!33;CL:0000117!6.98e-13!23;CL:0000337!6.98e-13!23;CL:0002321!4.82e-08!70;CL:0000220!4.82e-08!70
|ontology_enrichment_celltype_v019_2=CL:0002319,4.97e-18,43;CL:0000221,2.28e-17,44;CL:0000133,2.28e-17,44;CL:0000393,1.94e-15,39;CL:0000211,1.94e-15,39;CL:0000540,1.30e-14,33;CL:0000047,1.30e-14,33;CL:0000031,1.30e-14,33;CL:0000404,1.30e-14,33;CL:0000117,6.98e-13,23;CL:0000337,6.98e-13,23;CL:0002321,4.82e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.87e-33!73;UBERON:0005743!1.87e-33!73;UBERON:0000073!5.94e-33!75;UBERON:0001016!5.94e-33!75;UBERON:0004121!1.50e-27!102;UBERON:0000924!1.50e-27!102;UBERON:0006601!1.50e-27!102;UBERON:0001049!2.28e-24!52;UBERON:0005068!2.28e-24!52;UBERON:0006241!2.28e-24!52;UBERON:0007135!2.28e-24!52;UBERON:0000955!6.35e-24!50;UBERON:0006238!6.35e-24!50;UBERON:0002616!2.59e-23!49;UBERON:0000033!7.81e-23!63;UBERON:0002346!8.65e-21!71;UBERON:0003075!8.65e-21!71;UBERON:0007284!8.65e-21!71;UBERON:0002020!3.22e-20!34;UBERON:0003080!3.42e-18!40;UBERON:0002791!5.06e-18!29;UBERON:0003528!5.06e-18!29;UBERON:0001893!5.06e-18!29;UBERON:0002780!1.26e-17!39;UBERON:0001890!1.26e-17!39;UBERON:0006240!1.26e-17!39;UBERON:0003056!1.38e-17!49;UBERON:0000153!4.63e-15!94;UBERON:0007811!5.11e-15!86;UBERON:0000956!1.69e-13!21;UBERON:0001869!1.69e-13!21;UBERON:0000203!1.69e-13!21;UBERON:0004111!2.06e-12!122;UBERON:0002619!1.35e-11!17;UBERON:0000025!1.76e-11!114;UBERON:0002021!3.71e-08!10;UBERON:0000411!3.71e-08!10;UBERON:0001950!3.71e-08!10;UBERON:0000468!1.14e-07!333;UBERON:0000477!1.81e-07!154;UBERON:0000922!8.11e-07!328;UBERON:0003076!8.92e-07!12;UBERON:0003057!8.92e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.87e-33,73;UBERON:0001016,5.94e-33,75;UBERON:0004121,1.78e-30,95;UBERON:0000924,1.78e-30,95;UBERON:0006601,1.78e-30,95;UBERON:0000073,9.02e-26,54;UBERON:0001049,2.28e-24,52;UBERON:0005068,2.28e-24,52;UBERON:0006241,2.28e-24,52;UBERON:0007135,2.28e-24,52;UBERON:0002346,3.94e-24,64;UBERON:0003075,3.94e-24,64;UBERON:0007284,3.94e-24,64;UBERON:0010371,1.31e-22,73;UBERON:0000955,4.96e-22,47;UBERON:0006238,4.96e-22,47;UBERON:0002616,1.98e-21,46;UBERON:0010314,3.46e-21,92;UBERON:0002020,3.22e-20,34;UBERON:0003080,3.42e-18,40;UBERON:0003528,5.06e-18,29;UBERON:0002791,5.06e-18,29;UBERON:0001893,5.06e-18,29;UBERON:0002780,1.26e-17,39;UBERON:0001890,1.26e-17,39;UBERON:0006240,1.26e-17,39;UBERON:0003056,1.38e-17,49;UBERON:0000956,1.69e-13,21;UBERON:0001869,1.69e-13,21;UBERON:0000203,1.69e-13,21;UBERON:0004111,2.06e-12,122;UBERON:0002619,1.35e-11,17;UBERON:0000025,1.76e-11,114;UBERON:0002021,3.71e-08,10;UBERON:0000411,3.71e-08,10;UBERON:0001950,3.71e-08,10;UBERON:0000922,1.05e-07,320;UBERON:0002050,1.52e-07,294;UBERON:0000923,4.45e-07,291;UBERON:0010316,4.45e-07,291;UBERON:0005291,4.45e-07,291;UBERON:0006598,4.45e-07,291;UBERON:0010317,4.45e-07,291;UBERON:0002532,4.45e-07,291;UBERON:0005423,8.16e-07,304;UBERON:0003076,8.92e-07,12;UBERON:0003057,8.92e-07,12
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7778,41.8838102281308,42.4460989429679,47.4630431952844,40.8337994205352,45.3144203852998,43.9716384458787,42.1427066594288,41.9952513465409,44.1150912291717,74.4074679063131,38.7247854253905,48.8102546848438,51.3351137228286,44.8184587467727,39.8736456158236,43.1874638216375,41.5351987652201,46.0332522028871,52.9069224608953,64.230691395504,44.8735791292013,38.315065689841,31.6349748067668,36.6376720797382,37.4165793945036,38.5441828275654,36.6596121035905,38.1038980110409,44.5262044271331,40.3134007204949,39.1205598330941,38.3009471307227,43.5839642630692,53.0621135904323,58.949899739955,52.8326569030274,48.2660548558979,45.1609618019371,68.002737099331,44.1053817310278,48.352028806558,49.9478323254223,50.1572104035363,112.385616680796,114.16065865378,115.724893714758,155.011570474006,123.999936078486,119.352235787573,118.803960040798,117.984155244746,115.551314290972,137.206482614232,45.0437088515327,50.6761589219309,45.5858727363538,49.1075568477954,34.7957849962451,35.1141101139527,41.5601380989021,44.70960742084,38.189385941426,48.0124702351215,46.8936704796944,41.6864214463228,40.0785651971097,39.8876699482336,38.2520223244384,40.4849637590613,41.0230513844788,43.2116653838699,40.7965041795274,45.926063081932,50.4017801006561,43.126620896719,48.8794189392008,45.6387748225512,47.9016746314033,43.2380646326467,46.2807771368115,47.6156177702496,43.8647287722134,60.042223067378,43.3017816153236,39.3032884678498,48.698494137193,48.6501681323933,38.5813221962283,51.2111684772789,38.364783785047,38.2470476205971,48.7785246775551,36.3975841547201,42.4318139185371
|phase1_expression=52.3686730032676,22.6834014965585,17.2899710968024,23.8946726932396,29.0519523368881,21.9921846204576,26.8654536684855,47.7756296733832,36.0419128708267,56.6436153699224,48.9683389124944,63.4188664012924,44.3409890521823,43.8850420143367,47.6346959396398,31.1811911780332,37.7763414189199,63.5656263196849,64.9922415291202,45.8340823941873,52.0464935724547,29.5887034578638,26.6423784921714,29.918583062367,27.0702951659261,18.9496548157957,18.0920038386811,21.331652035903,31.9239344686708,34.5281277771105,32.8161155769851,37.4668097341182,27.6779154413057,15.8481681015439,27.7297554961224,30.9196440366796,29.8087260143059,28.4601508901097,25.7840663692854,31.4114246384279,26.4704169613956,32.7861832780054,26.2175590636823,60.0527821743504,57.7848507951233,55.2475724006661,63.3736988921912,91.788590836168,95.3438033067608,119.185528132536,69.5732515478052,90.5641155499321,50.5025644233786,41.3456420946466,42.011724892808,50.9373683351175,50.4298854292212,50.5358650431893,90.6377744650998,83.5805747249812,95.7085419294331,67.4300618817573,59.5827513394463,51.2942838850397,52.4099172160496,49.0231279312809,68.0092250876779,69.9277315685229,71.7532117174665,90.4539786822327,78.0305606613627,83.4100874459106,81.5004916111454,79.3740378912902,75.813767575425,91.0026598743921,81.4857519395476,106.746614639217,105.681294880296,106.432234198266,96.9769022185542,106.266327593579,104.693624625518,106.362133295988,104.055606736008,60.3988600221019,76.5959642699174,78.8469655841022,42.7095730399158,48.6680847087699,62.3208650708607,23.2314446784974,17.6792546764015,36.1601138397337,48.0834548911275,30.9138552097162,44.8017700220288,33.0634825801432,25.718814455684,26.1471285137652,39.2953141176939,43.6310023208681,35.6727335589304,28.4426681261332,43.0817171612316,50.1652533640695,57.6297867316853,32.428221840213,66.0291603300288,60.119066321254,35.5644919870578,32.5778061793991,38.5127880417618,39.0371639031292,39.8625717190039,43.6063071913974,34.6072954828123,50.4651755650492,45.1151381494436,50.7947908834865,45.4933528028411,42.6690222758995,46.5979403045305,109.79279887933,91.7376575842933,35.5085306739942,29.7141508774682,25.1959147017231,22.9997111002247,92.2710338733708,97.4476284003674,58.8062367888205,103.773119154789,95.893296498874,93.0890439626829,100.914065628145,47.3553041903971,47.7722767142757,41.95197789999,45.8763245832513,45.5421550369463,33.565707247287,47.3563401388068,54.2537344208574,52.3200678473711,52.1422841559339,57.4391571551138,57.9495550455395,50.0117743604194,48.2220504427939,42.9320742960035,37.2632745126877,47.5460796175772,47.7105468135368,47.9472377830508,44.5836757673425,29.4929538671559,28.8229655968481,26.4272054437901,36.0398844211773,38.931325956862,38.8934052755792,40.2466050494857,50.9619360225776,43.0405244955785,45.1115852815791,50.703672864528,46.4726062621335,52.8237118222272,59.5927894607116,58.2884740634703,63.4507945425942,65.206384241442,59.8560627671258,96.1025064938061,70.0780410302927,32.711459515396,37.0230793328962,42.6576501070468,48.3052277469712,42.2685273136466,40.9417554985385,31.5776822259716,31.0067770563471,27.5226855695817,37.5513616770745,40.2136334080431,33.2257308308722,31.3892180261783,42.2445122067484,38.0402967779462,39.6291133776191,34.1402221715547,41.8149556151607,45.0830942692322,38.897403618455,41.6997847410395,37.1719845418688,44.4552855983529,38.969079066615,42.8606527006953,41.9550357334122,25.791378556582,34.3700917775154,29.6804082620937,28.7823503852613,22.9231937169008,31.1118536080618,29.2819729548633,26.7557407829254,23.6717431091552,26.0833342528677,12.9391385874619,22.3284568601102,29.3315412727687,23.9949934049756,25.6538301336334,23.1572890254416,61.707565515646,35.6243854128511,44.6524035451151,50.7537806467813,52.335925368336,44.2216519646394,43.5619862821405,49.1736792601653,58.7979087516092,52.7085961364084,54.2146213435456,62.1041962772647,56.8133590338796,59.8847102527458,58.8086007363162,60.3735309038768,34.4234991113325,37.8033342437484,85.4129138735053,83.1030857938721,36.5574928189986,74.9838653796988,47.3262329124385,53.4901079686395,56.4409302059933,60.4591058819957,62.3836287430704,61.7106837119655,51.0061484110367,59.035683298085,67.198922250909,93.8258243951677,41.0206846251896,43.6260728984775,45.4454616596477,57.0796625484973,29.2039304347918,44.1860757802066,38.3950917345234,33.1944940370381,28.0536798236734,33.817866273832,28.9439688348408,42.5334463488681,37.075727352011,41.7168520475277,32.6797686582496,35.0660847043835,68.7688003622652,52.7579005511739,43.5938764347883,43.2960810763816,43.448357242357,54.5808581862336,45.4155296861854,45.3652774180753,30.7419937563461,33.6812992673474,49.8394179604214,59.6888235648158,48.2778635820758,48.0694011677402,46.3164694732169,52.5250879184196,30.8969686827642,80.4745810725612,30.0732750204221,39.4198917809755,37.7796835834212,34.6597960888631,37.864301078724,36.1469513666306,27.026570369023,23.6517954426982,29.1601944727334,39.1414953386197,43.9707031077778,41.8838102281308,42.4460989429679,47.4630431952844,40.8337994205352,45.3144203852998,43.9716384458787,42.1427066594288,41.9952513465409,44.1150912291717,74.4074679063131,38.7247854253905,48.8102546848438,51.3351137228286,44.8184587467727,39.8736456158236,43.1874638216375,41.5351987652201,46.0332522028871,52.9069224608953,64.230691395504,44.8735791292013,38.315065689841,31.6349748067668,36.6376720797382,37.4165793945036,38.5441828275654,36.6596121035905,38.1038980110409,44.5262044271331,40.3134007204949,39.1205598330941,38.3009471307227,43.5839642630692,53.0621135904323,58.949899739955,52.8326569030274,48.2660548558979,45.1609618019371,68.002737099331,44.1053817310278,48.352028806558,49.9478323254223,50.1572104035363,112.385616680796,114.16065865378,115.724893714758,155.011570474006,123.999936078486,119.352235787573,118.803960040798,117.984155244746,115.551314290972,137.206482614232,45.0437088515327,50.6761589219309,45.5858727363538,49.1075568477954,34.7957849962451,35.1141101139527,41.5601380989021,44.70960742084,38.189385941426,48.0124702351215,46.8936704796944,41.6864214463228,40.0785651971097,39.8876699482336,38.2520223244384,40.4849637590613,41.0230513844788,43.2116653838699,40.7965041795274,45.926063081932,50.4017801006561,43.126620896719,48.8794189392008,45.6387748225512,47.9016746314033,43.2380646326467,46.2807771368115,47.6156177702496,43.8647287722134,60.042223067378,43.3017816153236,39.3032884678498,48.698494137193,48.6501681323933,38.5813221962283,51.2111684772789,38.364783785047,38.2470476205971,48.7785246775551,36.3975841547201,42.4318139185371
|short_description=p1@Nudcd3
|short_description=p1@Nudcd3
}}
}}

Latest revision as of 20:23, 1 October 2015

Short description:p1@Nudcd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nudcd3_5end
Coexpression cluster:MCL_coexpression_mm9:1083
Association with transcript: 0bp_to_ENSMUST00000109806_5end
EntrezGene:Nudcd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nudcd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G752.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I522.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I617.29
CD326+ enterocyte, pool1.CNhs13542.11848-124I323.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I429.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.99
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I826.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E947.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E736.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F256.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E648.97
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F163.42
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E444.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E843.89
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A147.63
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A331.18
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A537.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A263.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A464.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A645.83
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A352.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H229.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I926.64
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D129.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D227.07
GP2+ M cell, pool1.CNhs13228.11845-124H918.95
GP2+ M cell, pool2.CNhs13231.11846-124I118.09
GP2+ M cell, pool3.CNhs13240.11847-124I221.33
Ileum epithelium, pool1.CNhs13199.10252-104B931.92
Ileum epithelium, pool2.CNhs13232.10253-104C134.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C832.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I337.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F527.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F630.92
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F729.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H331.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G926.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H426.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D860.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D957.78
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B355.25
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B763.37
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C291.79
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B895.34
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3119.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C469.57
Mouse Astrocytes, donor3.CNhs12107.11633-122C490.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A250.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I941.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A142.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C150.94
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E150.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C550.54
Mouse Granule cells, donor1.CNhs12131.11713-123C390.64
Mouse Granule cells, donor2.CNhs12357.11731-123E383.58
Mouse Granule cells, donor3.CNhs12108.11636-122C795.71
Mouse Meningeal cells, donor1.CNhs12132.11716-123C667.43
Mouse Meningeal cells, donor3.CNhs12109.11639-122D159.58
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C751.29
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E752.41
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D249.02
Mouse Microglia, donor1.CNhs12629.11718-123C868.01
Mouse Microglia, donor2.CNhs12634.11736-123E869.93
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D571.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F590.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D978.03
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F183.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D581.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D279.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F275.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D691.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D381.49
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3106.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7105.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4106.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F496.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8106.27
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4104.69
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5106.36
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6104.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D660.40
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F676.60
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E178.85
Mouse Schwann, donor1.CNhs12507.11728-123D942.71
Mouse Schwann, donor2.CNhs12573.11746-123F948.67
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G362.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F723.23
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C836.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F448.08
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.91
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A744.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I733.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.15
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G639.30
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H143.63
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G143.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G250.17
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G357.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B632.43
accessory axillary lymph node, adult.CNhs10475.1063-29H966.03
adrenal gland, adult.CNhs10508.49-24D760.12
adrenal gland, embryo E14.CNhs11038.406-44C535.56
adrenal gland, embryo E16.CNhs11004.1254-43D632.58
adrenal gland, embryo E17.CNhs11043.1263-45I138.51
adrenal gland, embryo E18.CNhs11026.1262-18F539.04
adrenal gland, neonate N00.CNhs11191.1311-23C139.86
adrenal gland, neonate N25.CNhs11223.1377-27I343.61
amnion, adult pregnant day17.5.CNhs10488.583-22A834.61
aorta, adult.CNhs10498.46-23H150.47
bone (os femoris), adult.CNhs10483.56-12G245.12
bone (os femoris), neonate N02.CNhs11227.1985-43F550.79
bone (os femoris), neonate N16.CNhs11225.1525-43A645.49
bone (os femoris), neonate N20.CNhs11195.1350-25C342.67
cecum, adult.CNhs10467.37-13H446.60
cerebellum, adult.CNhs10494.15-8B2109.79
cerebellum, neonate N30.CNhs11135.1395-42I291.74
colon, adult.CNhs10468.36-18H735.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C729.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D125.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.00
corpora quadrigemina, adult.CNhs10501.16-22A492.27
corpus striatum, adult.CNhs10487.19-21D897.45
corpus striatum, neonate N00.CNhs11226.630-43F158.81
cortex, adult.CNhs10473.12-14D5103.77
cortex, neonate N30.CNhs11107.1392-42F295.89
diencephalon, adult.CNhs10482.20-12F293.09
diencephalon, neonate N30.CNhs11201.1388-42B2100.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B147.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A247.77
epididymis, adult.CNhs10490.58-23B241.95
eyeball, adult.CNhs10484.31-12G445.88
eyeball, embryo E12.CNhs11016.345-16C645.54
eyeball, embryo E14.CNhs10521.399-16E233.57
eyeball, embryo E15.CNhs10593.426-16C947.36
eyeball, embryo E17.CNhs11023.1261-18D454.25
eyeball, neonate N00.CNhs11207.633-15C652.32
eyeball, neonate N01.CNhs11140.1532-43E752.14
eyeball, neonate N02.CNhs11205.1551-44G857.44
eyeball, neonate N16.CNhs11188.777-19A257.95
forelimb, embryo E11.CNhs10596.335-25E250.01
forelimb, embryo E12.CNhs10600.359-14H248.22
forelimb, embryo E13.CNhs10589.384-1E242.93
forelimb, embryo E14.CNhs10577.413-26A837.26
forelimb, embryo E15.CNhs11007.437-20E747.55
forelimb, embryo E17.CNhs10598.1517-43C447.71
forelimb, embryo E18.CNhs11008.1520-43B547.95
gonad, embryo E13.CNhs11044.1564-45I644.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C829.49
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D228.82
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.43
heart, embryo E11.CNhs10586.331-24E936.04
heart, embryo E12.CNhs11015.353-12F538.93
heart, embryo E13.CNhs11013.376-3I938.89
heart, embryo E14.CNhs10597.403-26D440.25
heart, embryo E15.CNhs11017.431-16C850.96
heart, embryo E16.CNhs11021.457-17C643.04
heart, embryo E17.CNhs11025.479-18E545.11
heart, embryo E18.CNhs11030.1283-20G350.70
heart, neonate N00.CNhs11213.639-21E346.47
heart, neonate N03.CNhs11221.1349-25I252.82
heart, neonate N10.CNhs11118.749-24G159.59
heart, neonate N16.CNhs11209.782-15G158.29
heart, neonate N20.CNhs11127.821-26I663.45
heart, neonate N25.CNhs11196.1351-25D365.21
heart, neonate N30.CNhs11202.1390-42D259.86
hippocampus, adult.CNhs10478.13-16E896.10
hippocampus, neonate N00.CNhs11228.627-43G170.08
intestinal mucosa, adult.CNhs10506.860-29I332.71
intestine, adult.CNhs10496.178-9A337.02
intestine, embryo E12.CNhs11019.1251-16I542.66
intestine, embryo E13.CNhs11010.381-16D548.31
intestine, embryo E15.CNhs10602.976-16D842.27
intestine, embryo E16.CNhs10585.463-22H440.94
intestine, embryo E17.CNhs10582.482-18D331.58
intestine, embryo E18.CNhs10526.1289-20F731.01
intestine, neonate N00.CNhs11126.644-26D127.52
intestine, neonate N01.CNhs11192.1322-23E937.55
intestine, neonate N06.CNhs11102.688-20B840.21
intestine, neonate N07.CNhs11095.720-20F233.23
intestine, neonate N10.CNhs11098.755-23A531.39
intestine, neonate N20.CNhs11187.827-18D142.24
intestine, neonate N25.CNhs11121.1352-25E338.04
intestine, neonate N30.CNhs11131.1384-42G139.63
kidney, embryo E14.CNhs10606.411-4I934.14
kidney, embryo E15.CNhs10997.434-16F841.81
kidney, embryo E16.CNhs10584.464-22A545.08
kidney, embryo E17.CNhs11028.483-18I238.90
kidney, embryo E18.CNhs11001.1288-20C741.70
kidney, neonate N00.CNhs11214.646-21G737.17
kidney, neonate N10.CNhs11206.758-6D544.46
kidney, neonate N20.CNhs11113.832-19I138.97
kidney, neonate N25.CNhs11122.1353-25F342.86
kidney, neonate N30.CNhs11203.1385-42H141.96
liver, adult pregnant day01.CNhs10466.508-5B225.79
liver, embryo E12.CNhs10601.355-15F834.37
liver, embryo E13.CNhs10524.378-3H629.68
liver, embryo E14.CNhs10594.409-16E128.78
liver, embryo E15.CNhs10520.433-16D722.92
liver, embryo E16.CNhs10523.462-17F531.11
liver, embryo E17.CNhs10510.481-18A329.28
liver, embryo E18.CNhs10579.499-43G426.76
liver, neonate N00.CNhs11117.641-24F423.67
liver, neonate N03.CNhs11123.1345-25G226.08
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B929.33
liver, neonate N20.CNhs11220.823-25A323.99
liver, neonate N25.CNhs11198.1368-26H125.65
liver, neonate N30.CNhs11106.1382-42D123.16
lung, adult.CNhs10474.28-22B161.71
lung, embryo E12.CNhs10522.354-16G235.62
lung, embryo E14.CNhs10604.404-26F844.65
lung, embryo E15.CNhs11020.432-17C550.75
lung, embryo E16.CNhs10998.458-17B652.34
lung, embryo E17.CNhs10605.480-44A644.22
lung, embryo E18.CNhs10583.1287-20I643.56
lung, neonate N00.CNhs11224.640-42C649.17
lung, neonate N06.CNhs11212.683-20E558.80
lung, neonate N07.CNhs11111.715-19A352.71
lung, neonate N10.CNhs11219.750-23E654.21
lung, neonate N20.CNhs11109.822-18A462.10
lung, neonate N25.CNhs11119.1359-25C756.81
lung, neonate N30.CNhs11133.1394-42H259.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A158.81
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A160.37
mammary gland, adult lactating day02.CNhs10480.595-22B634.42
mammary gland, adult pregnant day19.CNhs10476.588-5H237.80
medulla oblongata, adult.CNhs10477.17-12C285.41
medulla oblongata, neonate N30.CNhs11200.1396-42A383.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C736.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C274.98
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E147.33
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E253.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E356.44
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D760.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D862.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D961.71
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D451.01
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D559.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D667.20
olfactory brain, adult.CNhs10489.18-22I993.83
ovary, adult.CNhs10507.91-2I741.02
ovary, embryo E18.CNhs11040.505-44H743.63
ovary, neonate N00.CNhs11217.1299-22I445.45
oviduct, adult pregnant day01.CNhs10500.988-6G657.08
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F444.19
pancreas, embryo E15.CNhs11042.1556-45F238.40
pancreas, embryo E16.CNhs11003.460-26E533.19
pancreas, embryo E17.CNhs10599.1558-45G328.05
pancreas, embryo E18.CNhs10580.1535-43I733.82
pancreas, neonate N00.CNhs11105.645-26G928.94
pancreas, neonate N01.CNhs11138.1531-43D742.53
pancreas, neonate N02.CNhs11139.1539-43D837.08
pancreas, neonate N16.CNhs11136.787-43B641.72
pancreas, neonate N25.CNhs11094.1555-45E232.68
pancreas, neonate N30.CNhs11182.1548-44H535.07
pituitary gland, adult.CNhs10493.21-1G868.77
pituitary gland, embryo E12.CNhs11018.346-16E652.76
pituitary gland, embryo E13.CNhs11009.370-44C743.59
pituitary gland, embryo E14.CNhs11037.398-44A543.30
pituitary gland, embryo E15.CNhs10592.427-16B943.45
pituitary gland, embryo E16.CNhs11036.449-43F654.58
pituitary gland, embryo E17.CNhs11039.1265-44F545.42
pituitary gland, neonate N00.CNhs11190.1308-22E945.37
placenta, adult pregnant day10.CNhs10472.539-13I730.74
placenta, adult pregnant day17.CNhs10464.577-18G333.68
prostate, adult.CNhs10470.859-1F849.84
skin, adult.CNhs10492.30-1C359.69
skin, neonate N00.CNhs11124.650-25G448.28
skin, neonate N03.CNhs11215.662-22H348.07
skin, neonate N06.CNhs11097.693-20I546.32
skin, neonate N10.CNhs11108.762-6C452.53
small intestine, neonate N16.CNhs11114.790-21I130.90
spinal cord, adult.CNhs10505.24-13C980.47
spleen, adult.CNhs10465.25-2G230.07
spleen, embryo E16.CNhs11035.461-43C139.42
spleen, embryo E18.CNhs11011.1271-21F237.78
spleen, neonate N10.CNhs11116.752-24D134.66
spleen, neonate N20.CNhs11112.824-19H137.86
spleen, neonate N25.CNhs11099.1354-25G336.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C627.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.16
stomach, adult.CNhs10503.33-1H639.14
stomach, embryo E12.CNhs10588.356-43E343.97
stomach, embryo E15.CNhs10603.1252-16G841.88
stomach, embryo E16.CNhs11022.459-17D442.45
stomach, embryo E17.CNhs11006.1035-18D547.46
stomach, embryo E18.CNhs10999.1286-20C640.83
stomach, neonate N03.CNhs11193.1340-24B845.31
stomach, neonate N07.CNhs11210.718-18A943.97
stomach, neonate N25.CNhs11104.1355-25E442.14
stomach, neonate N30.CNhs11134.1386-42I142.00
submandibular gland, adult.CNhs10469.59-29C144.12
testis, adult.CNhs10504.57-7G574.41
testis, embryo E13.CNhs11031.389-23F538.72
testis, embryo E15.CNhs11034.443-27C548.81
testis, embryo E16.CNhs11033.470-26G551.34
testis, embryo E17.CNhs11029.486-18I544.82
testis, embryo E18.CNhs11027.503-18G539.87
testis, neonate N00.CNhs11189.1300-22B743.19
testis, neonate N07.CNhs11222.726-26I441.54
testis, neonate N10.CNhs11204.763-44D946.03
testis, neonate N20.CNhs11110.839-18H352.91
testis, neonate N30.CNhs11130.1391-42E264.23
thymus, adult.CNhs10471.38-12B544.87
thymus, embryo E14.CNhs11041.402-44I438.32
thymus, embryo E15.CNhs11005.430-45I231.63
thymus, embryo E16.CNhs11002.456-26C536.64
thymus, embryo E17.CNhs10581.478-18C137.42
thymus, embryo E18.CNhs10595.1273-19G438.54
thymus, neonate N02.CNhs11181.1541-43F836.66
thymus, neonate N03.CNhs11137.2104-43C738.10
thymus, neonate N06.CNhs11197.681-26C444.53
thymus, neonate N07.CNhs11211.713-19D340.31
thymus, neonate N10.CNhs11194.748-24E439.12
thymus, neonate N20.CNhs11186.820-7A238.30
thymus, neonate N25.CNhs11125.1362-25G743.58
thymus, neonate N30.CNhs11132.1393-42G253.06
tongue, adult.CNhs10499.32-1B458.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H352.83
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F748.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G545.16
urinary bladder, adult.CNhs10481.879-12E468.00
uterus, adult pregnant day19.CNhs10497.590-15F544.11
uterus, adult.CNhs10509.92-27E548.35
vagina, adult.CNhs10502.89-27D549.95
vesicular gland, adult.CNhs10491.51-27F850.16
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1112.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2114.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3115.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7155.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4124.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5119.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6118.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7117.98
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8115.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9137.21
whole body, embryo E11.CNhs11014.324-5I845.04
whole body, embryo E12.CNhs10587.857-27C950.68
whole body, embryo E13.CNhs10512.372-23H245.59
whole body, embryo E14.5.CNhs10578.420-27D249.11
whole body, embryo E14.CNhs10519.395-14B134.80
whole body, embryo E16.CNhs10514.453-14F235.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G541.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G544.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G538.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G548.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G546.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G541.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G540.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G539.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G538.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G540.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G541.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G543.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G540.80
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G545.93
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G550.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G543.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G548.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G545.64
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G547.90
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G543.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G546.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G547.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G543.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G560.04
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G543.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G539.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G548.70
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G548.65
whole body, embryo E17.5.CNhs10513.490-9F938.58
whole body, embryo E17.CNhs10517.475-3I551.21
whole body, embryo E18.CNhs10516.493-3B338.36
whole body, neonate N00.CNhs10525.657-19C238.25
whole body, neonate N01.CNhs10576.659-23C648.78
whole body, neonate N06.CNhs10515.692-21D136.40
whole body, neonate N10.CNhs10518.761-6B442.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell4.97e-1843
ectodermal cell2.28e-1744
neurectodermal cell2.28e-1744
electrically responsive cell1.94e-1539
electrically active cell1.94e-1539
neuron1.30e-1433
neuronal stem cell1.30e-1433
neuroblast1.30e-1433
electrically signaling cell1.30e-1433
CNS neuron (sensu Vertebrata)6.98e-1323
neuroblast (sensu Vertebrata)6.98e-1323
embryonic cell4.82e-0870

Uber anatomy
Ontology termp-valuen
central nervous system1.87e-3373
nervous system5.94e-3375
ectoderm-derived structure1.78e-3095
ectoderm1.78e-3095
presumptive ectoderm1.78e-3095
regional part of nervous system9.02e-2654
neural tube2.28e-2452
neural rod2.28e-2452
future spinal cord2.28e-2452
neural keel2.28e-2452
neurectoderm3.94e-2464
neural plate3.94e-2464
presumptive neural plate3.94e-2464
ecto-epithelium1.31e-2273
brain4.96e-2247
future brain4.96e-2247
regional part of brain1.98e-2146
structure with developmental contribution from neural crest3.46e-2192
gray matter3.22e-2034
anterior neural tube3.42e-1840
brain grey matter5.06e-1829
regional part of telencephalon5.06e-1829
telencephalon5.06e-1829
regional part of forebrain1.26e-1739
forebrain1.26e-1739
future forebrain1.26e-1739
pre-chordal neural plate1.38e-1749
cerebral cortex1.69e-1321
cerebral hemisphere1.69e-1321
pallium1.69e-1321
anatomical conduit2.06e-12122
regional part of cerebral cortex1.35e-1117
tube1.76e-11114
occipital lobe3.71e-0810
visual cortex3.71e-0810
neocortex3.71e-0810
embryo1.05e-07320
embryonic structure1.52e-07294
germ layer4.45e-07291
germ layer / neural crest4.45e-07291
embryonic tissue4.45e-07291
presumptive structure4.45e-07291
germ layer / neural crest derived structure4.45e-07291
epiblast (generic)4.45e-07291
developing anatomical structure8.16e-07304
posterior neural tube8.92e-0712
chordal neural plate8.92e-0712
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