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FFCP PHASE1:Mm9::chr6:86354214..86354234,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:86354214..86354234,+
|DHSsupport=NA
|short_description=p3@Tia1
|DPIdataset=NA
|description=CAGE_peak_3_at_Tia1_5end
|association_with_transcript=1bp_to_ENSMUST00000095753,ENSMUST00000095754,NM_001164078,NM_001164079,NM_011585,uc009crp.2,uc009crq.2,uc009crr.2,uc012eok.1_5end
|EntrezGene=21841
|EntrezGene=21841
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=P52912,D3Z4H6,Q80ZW7,Q8CII5,Q564E7
|UniProt=P52912,D3Z4H6,Q80ZW7,Q8CII5,Q564E7
|association_with_transcript=1bp_to_ENSMUST00000095753,ENSMUST00000095754,NM_001164078,NM_001164079,NM_011585,uc009crp.2,uc009crq.2,uc009crr.2,uc012eok.1_5end
|cluster_id=chr6:86354214..86354234,+
|description=CAGE_peak_3_at_Tia1_5end
|id=chr6:86354214..86354234,+
|ontology_enrichment_celltype=CL:0000540!1.63e-14!33;CL:0000047!1.63e-14!33;CL:0000031!1.63e-14!33;CL:0000404!1.63e-14!33;CL:0000393!6.52e-14!39;CL:0000211!6.52e-14!39;CL:0000117!4.69e-11!23;CL:0000337!4.69e-11!23;CL:0002319!2.93e-10!43;CL:0000221!4.07e-10!44;CL:0000133!4.07e-10!44;CL:0000055!2.08e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.43e-14,33;CL:0000047,1.43e-14,33;CL:0000031,1.43e-14,33;CL:0000404,1.43e-14,33;CL:0000393,5.76e-14,39;CL:0000211,5.76e-14,39;CL:0000117,4.27e-11,23;CL:0000337,4.27e-11,23;CL:0002319,2.12e-10,43;CL:0000221,2.96e-10,44;CL:0000133,2.96e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.18e-23!75;UBERON:0001016!7.18e-23!75;UBERON:0001017!7.26e-23!73;UBERON:0005743!7.26e-23!73;UBERON:0002346!1.10e-19!71;UBERON:0003075!1.10e-19!71;UBERON:0007284!1.10e-19!71;UBERON:0004121!1.18e-19!102;UBERON:0000924!1.18e-19!102;UBERON:0006601!1.18e-19!102;UBERON:0001049!3.79e-18!52;UBERON:0005068!3.79e-18!52;UBERON:0006241!3.79e-18!52;UBERON:0007135!3.79e-18!52;UBERON:0003056!1.27e-17!49;UBERON:0000033!1.65e-17!63;UBERON:0000955!8.83e-17!50;UBERON:0006238!8.83e-17!50;UBERON:0002616!2.09e-16!49;UBERON:0002780!6.52e-16!39;UBERON:0001890!6.52e-16!39;UBERON:0006240!6.52e-16!39;UBERON:0003080!8.11e-16!40;UBERON:0000153!1.48e-14!94;UBERON:0002020!2.56e-14!34;UBERON:0007811!1.33e-13!86;UBERON:0002791!2.29e-12!29;UBERON:0003528!2.29e-12!29;UBERON:0001893!2.29e-12!29;UBERON:0000956!2.59e-09!21;UBERON:0001869!2.59e-09!21;UBERON:0000203!2.59e-09!21;UBERON:0002619!3.45e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.31e-23,75;UBERON:0001017,4.35e-23,73;UBERON:0002346,1.31e-21,64;UBERON:0003075,1.31e-21,64;UBERON:0007284,1.31e-21,64;UBERON:0004121,7.29e-21,95;UBERON:0000924,7.29e-21,95;UBERON:0006601,7.29e-21,95;UBERON:0010371,9.86e-19,73;UBERON:0000073,1.40e-18,54;UBERON:0001049,3.21e-18,52;UBERON:0005068,3.21e-18,52;UBERON:0006241,3.21e-18,52;UBERON:0007135,3.21e-18,52;UBERON:0003056,1.08e-17,49;UBERON:0000955,3.82e-16,47;UBERON:0006238,3.82e-16,47;UBERON:0002780,5.64e-16,39;UBERON:0001890,5.64e-16,39;UBERON:0006240,5.64e-16,39;UBERON:0003080,7.03e-16,40;UBERON:0002616,8.99e-16,46;UBERON:0002020,2.25e-14,34;UBERON:0010314,8.34e-14,92;UBERON:0003528,2.06e-12,29;UBERON:0002791,2.06e-12,29;UBERON:0001893,2.06e-12,29;UBERON:0000956,2.39e-09,21;UBERON:0001869,2.39e-09,21;UBERON:0000203,2.39e-09,21;UBERON:0002619,3.26e-07,17
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4107130380836,2.33306951925227,0.621339313086926,0,3.43888055901151,3.97100377097034,3.88902376688095,1.54991788173277,4.39285926276023,3.99014611395563,2.47388331203505,2.51662426621706,1.44950472495604,1.72818003754719,4.74016680942267,2.63542779877213,3.08132871494482,3.37794139742267,2.32734704367726,3.3775830312815,3.00488623799922,3.39685912501528,2.92802704849628,4.11516755936999,3.02478555410522,4.48306251402861,2.98256709085021,3.03879945672079,1.81384306892169,0.665957860122194,0.897138566094757,1.00730769818447,1.15913756419314,0.93841237725591,1.64836461840539,1.92931541171159,3.00943262421218,4.51801474093653,5.9842280745933,9.16632821503035,4.1244763762485,4.7955776383945,4.5323633843382,8.77529250301348,5.85417564191487,6.34399372577886,7.7664046762773,4.56664329370377,7.58147259461959,6.31714341290296,3.16038732188782,3.5634237646757,1.65459157605013,3.77819437262746,4.32673620201678,5.13470735346904,3.53776096469316,6.84394109703647,3.01802146217722,2.52832070168682,3.07320731543373,2.92920891673628,2.38146845641537,3.59241410429052,3.27945674788299,1.23625770240992,3.97437084362873,2.40008476669791,3.19456451086807,3.33810665926249,3.34296758254356,3.10560955370591,3.21535509988371,3.65855945745545,3.94604567156764,2.17286582153379,1.12228454331548,3.2031454893527,3.54616136552028,5.72923460437565,2.32405261778949,1.73615949883027,4.24677982494508,2.33931608445408,1.71896843238639,2.48674831689496,0.882365676478062,1.62307484934295
|phase1_expression=4.00372117761985,1.39590163055744,0.454999239389536,0.60492842261366,3.00537437967808,0.503637815735669,1.63528848416868,1.03298658753261,0.703943610758334,1.87251621057595,0.513653904676515,0.797721589953364,1.02720437958723,0.699363219351979,0.666219523631325,0.809901069559304,0,2.20823515750766,1.50825876966313,1.69755860719212,1.87095238332354,3.47518329203099,4.70159620450084,1.11994695955385,2.98232065387321,1.14846392823004,1.29228598847722,1.29282739611533,1.33016393619462,1.51218077855958,1.99557459589774,4.44521471421742,0.61506478758457,0,0.577703239502549,0.831173226792462,1.42918549383658,2.51118978442145,1.5626706890476,1.0470474879476,1.17646297606203,1.36609096991689,0.485510353031154,3.39921408534059,3.14268486780495,4.77221555620372,3.9119567217402,1.74420125104357,1.09843091367236,1.36100929351998,1.1198913730029,0,1.51004345451963,2.90144856804538,0.672187598284928,1.28629718017973,2.29226751951005,3.09403255366465,8.29497489524351,10.5798195854407,12.6766280701236,2.71075625655306,1.77858959222228,1.3498495759221,0.988866362566974,1.4209602298922,2.09720077362883,1.92109152660777,8.19147937236973,7.42532660824299,8.2026734927039,5.14171771926846,3.97563373712904,9.30930074033651,9.10531974673246,7.35375029288017,7.70811166995721,3.57524546638526,2.91852413186863,10.6827893061457,6.86157327018072,6.77187381723788,2.51264699101243,4.50210088025344,3.0559649555362,4.41942878210502,5.12538050876771,5.96478226640962,2.65041676666144,3.17400552448499,0.869593466105033,0,0,0.539703191637817,0,1.34408066129201,0.983110940922263,2.21559419351475,1.55871602761721,1.41335829804136,2.39433813620357,1.28326477414318,2.54805239706646,0,1.73192832808971,2.02687892380079,1.01104889002957,0.91347103775248,1.03575153458869,1.48442139064825,3.99016251562112,2.13125834818499,1.15307748628029,2.86373017049983,2.70454026412121,1.63366568728578,1.23597483867187,0.578397427679647,0.884610551949874,1.94120219936891,1.32504911076236,1.45462575940567,0,3.22058876712702,2.72280718857492,1.27728527604296,1.31796636956512,1.19980546198682,2.03312363316904,2.99581278809645,7.77751024791665,9.67538511269056,4.51943232499919,6.13717097592793,3.32460871295296,7.30085683804909,2.13862664085664,1.24406970610093,1.76905930903572,1.47309299120532,4.81445638962004,4.13823787980251,4.14142898552303,4.06903008156431,4.01415344992834,4.61209393025459,5.62210347358373,3.10444044886819,4.31135985865684,8.13156144721623,6.68614271823006,4.16471891612392,4.17070873838397,2.43776516565517,1.23469281844766,4.77682240364384,3.51106593656617,1.02939162845886,0.852490498186778,3.31401236056803,3.51789089971644,3.42117916775928,1.89395788468168,2.95146347621106,2.62254091908543,1.86027155800326,1.07309360559848,1.28441876603886,0.822799249567402,1.31333971263276,0.648550476366846,0.877199924551994,1.09775057645525,0.671032093801859,6.51898840548794,7.30622747892919,0,1.58670339998127,7.89166526980366,3.71578674976702,2.57734922644187,3.02525286935014,1.77902435075896,1.14135375667535,1.89811624617805,0.658795818896044,2.01068167040216,1.39269530428806,0.974820435595601,0.898819408654221,0.864552199498777,1.1948476395262,3.98302592001472,4.91268604221834,1.1270773567308,2.64746726198909,1.93952487167626,1.47285221769669,1.89709611372772,1.18088118383682,1.56998727841375,1.23397163921801,0.889357881261447,2.16898637430922,1.57247196090562,0.899448449539415,0.608580364165509,0.72353147925725,1.01850340712568,0,0.972811360650212,3.56929837144506,0,0.744281895337007,1.24815069245824,1.26289438973556,0.538192240565737,1.92977408545347,1.47802552133284,5.11626811780309,4.72598431681875,3.90413697282933,2.11221223459652,1.84256883185997,1.19021820443007,0.585400943573396,1.26108115284953,1.7717175171902,0.956728611944923,0.983179888294428,0.863424909329478,0.578596234326046,1.50791283939272,1.63171705145613,0.983528546038072,1.37968373152366,3.05046120976805,4.10240903072711,1.14754461763673,0.757412781613119,4.10160685241134,5.0757036758563,6.03185513651837,5.01834475700359,2.89638276307112,7.07691326972081,4.45291771842384,4.9683495844923,5.53402889125133,4.4984984299053,5.10984306749767,1.06839362200353,2.28041743095006,3.13443233647817,2.65490276679926,3.8844901784797,2.41858845571801,3.39489143560617,1.18120757152309,3.68922177532713,1.80899805217755,1.09060118843252,1.42598951353889,1.8962205476149,4.21674434299995,3.09406629744561,4.42571487479924,6.48219938512717,2.58717367565509,4.28674070063185,7.98031051390231,5.17269571046005,4.93647061806363,4.87143918583359,0.469343416127421,1.48282449604674,2.42581237860458,1.31909002353184,2.42196640043858,1.80938774784468,2.26807453605959,2.62625439592098,0.874442509889552,4.45020724825223,0.512612642393558,2.88941615148511,1.29636169158798,1.31857919903284,1.36694227721025,1.60144721244566,3.22959016988325,1.11961161858926,2.21119958087078,1.90934123603023,6.48488786841327,4.47302827679067,3.02414954301044,2.92723614420256,1.9652630737156,1.61837215661785,1.73572257023205,3.14107130380836,2.33306951925227,0.621339313086926,0,3.43888055901151,3.97100377097034,3.88902376688095,1.54991788173277,4.39285926276023,3.99014611395563,2.47388331203505,2.51662426621706,1.44950472495604,1.72818003754719,4.74016680942267,2.63542779877213,3.08132871494482,3.37794139742267,2.32734704367726,3.3775830312815,3.00488623799922,3.39685912501528,2.92802704849628,4.11516755936999,3.02478555410522,4.48306251402861,2.98256709085021,3.03879945672079,1.81384306892169,0.665957860122194,0.897138566094757,1.00730769818447,1.15913756419314,0.93841237725591,1.64836461840539,1.92931541171159,3.00943262421218,4.51801474093653,5.9842280745933,9.16632821503035,4.1244763762485,4.7955776383945,4.5323633843382,8.77529250301348,5.85417564191487,6.34399372577886,7.7664046762773,4.56664329370377,7.58147259461959,6.31714341290296,3.16038732188782,3.5634237646757,1.65459157605013,3.77819437262746,4.32673620201678,5.13470735346904,3.53776096469316,6.84394109703647,3.01802146217722,2.52832070168682,3.07320731543373,2.92920891673628,2.38146845641537,3.59241410429052,3.27945674788299,1.23625770240992,3.97437084362873,2.40008476669791,3.19456451086807,3.33810665926249,3.34296758254356,3.10560955370591,3.21535509988371,3.65855945745545,3.94604567156764,2.17286582153379,1.12228454331548,3.2031454893527,3.54616136552028,5.72923460437565,2.32405261778949,1.73615949883027,4.24677982494508,2.33931608445408,1.71896843238639,2.48674831689496,0.882365676478062,1.62307484934295
|short_description=p3@Tia1
}}
}}

Latest revision as of 20:16, 1 October 2015

Short description:p3@Tia1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tia1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 1bp_to_ENSMUST00000095753, ENSMUST00000095754, NM_001164078, NM_001164079, NM_011585, uc009crp.2, uc009crq.2, uc009crr.2, uc012eok.1_5end
EntrezGene:Tia1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tia1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F93.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F19.68
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B27.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C64.01
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G85.62
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E26.69
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G17.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I57.89
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F84.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I75.11
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B97.98
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E36.48
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G54.39
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D34.12
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I84.57
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.43e-1433
neuronal stem cell1.43e-1433
neuroblast1.43e-1433
electrically signaling cell1.43e-1433
electrically responsive cell5.76e-1439
electrically active cell5.76e-1439
CNS neuron (sensu Vertebrata)4.27e-1123
neuroblast (sensu Vertebrata)4.27e-1123
neural cell2.12e-1043
ectodermal cell2.96e-1044
neurectodermal cell2.96e-1044

Uber anatomy
Ontology termp-valuen
nervous system4.31e-2375
central nervous system4.35e-2373
neurectoderm1.31e-2164
neural plate1.31e-2164
presumptive neural plate1.31e-2164
ectoderm-derived structure7.29e-2195
ectoderm7.29e-2195
presumptive ectoderm7.29e-2195
ecto-epithelium9.86e-1973
regional part of nervous system1.40e-1854
neural tube3.21e-1852
neural rod3.21e-1852
future spinal cord3.21e-1852
neural keel3.21e-1852
pre-chordal neural plate1.08e-1749
brain3.82e-1647
future brain3.82e-1647
regional part of forebrain5.64e-1639
forebrain5.64e-1639
future forebrain5.64e-1639
anterior neural tube7.03e-1640
regional part of brain8.99e-1646
gray matter2.25e-1434
structure with developmental contribution from neural crest8.34e-1492
brain grey matter2.06e-1229
regional part of telencephalon2.06e-1229
telencephalon2.06e-1229
cerebral cortex2.39e-0921
cerebral hemisphere2.39e-0921
pallium2.39e-0921
regional part of cerebral cortex3.26e-0717
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