FFCP PHASE1:Mm9::chr8:23763878..23763930,-: Difference between revisions
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{{FFCP|EntrezGene=18970|HGNC=|MCL_coexpression_id=0|UniProt=Q8K409|association_with_transcript=0bp_to_ENSMUST00000033938,NM_011130,uc009ldk.2_5end|description=CAGE_peak_1_at_Polb_5end|id=chr8:23763878..23763930,-|ontology_enrichment_celltype=CL:0000540!1.91e-14!33;CL:0000047!1.91e-14!33;CL:0000031!1.91e-14!33;CL:0000404!1.91e-14!33;CL:0000117!1.18e-12!23;CL:0000337!1.18e-12!23;CL:0000393!9.66e-11!39;CL:0000211!9.66e-11!39;CL:0002319!2.88e-09!43;CL:0000221!3.97e-09!44;CL:0000133!3.97e-09!44|ontology_enrichment_celltype_v019_2=CL:0000540,1.91e-14,33;CL:0000047,1.91e-14,33;CL:0000031,1.91e-14,33;CL:0000404,1.91e-14,33;CL:0000117,1.18e-12,23;CL:0000337,1.18e-12,23;CL:0000393,9.66e-11,39;CL:0000211,9.66e-11,39;CL:0002319,2.88e-09,43;CL:0000221,3.97e-09,44;CL:0000133,3.97e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.71e-21!102;UBERON:0000924!9.71e-21!102;UBERON:0006601!9.71e-21!102;UBERON:0001017!4.27e-20!73;UBERON:0005743!4.27e-20!73;UBERON:0000073!7.67e-19!75;UBERON:0001016!7.67e-19!75;UBERON:0000033!2.65e-18!63;UBERON:0002020!2.72e-17!34;UBERON:0001049!1.48e-16!52;UBERON:0005068!1.48e-16!52;UBERON:0006241!1.48e-16!52;UBERON:0007135!1.48e-16!52;UBERON:0002346!2.04e-15!71;UBERON:0003075!2.04e-15!71;UBERON:0007284!2.04e-15!71;UBERON:0000955!2.14e-15!50;UBERON:0006238!2.14e-15!50;UBERON:0002616!6.14e-15!49;UBERON:0002791!8.51e-15!29;UBERON:0003528!8.51e-15!29;UBERON:0001893!8.51e-15!29;UBERON:0003056!1.07e-14!49;UBERON:0003080!1.19e-12!40;UBERON:0002780!3.36e-12!39;UBERON:0001890!3.36e-12!39;UBERON:0006240!3.36e-12!39;UBERON:0000153!3.10e-11!94;UBERON:0007811!5.60e-11!86;UBERON:0000956!7.46e-11!21;UBERON:0001869!7.46e-11!21;UBERON:0000203!7.46e-11!21;UBERON:0002619!4.97e-09!17;UBERON:0004111!6.53e-08!122;UBERON:0002021!8.35e-08!10;UBERON:0000411!8.35e-08!10;UBERON:0001950!8.35e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.48e-25,95;UBERON:0000924,8.48e-25,95;UBERON:0006601,8.48e-25,95;UBERON:0010371,8.10e-23,73;UBERON:0001017,4.27e-20,73;UBERON:0002346,8.86e-20,64;UBERON:0003075,8.86e-20,64;UBERON:0007284,8.86e-20,64;UBERON:0001016,7.67e-19,75;UBERON:0010314,1.57e-17,92;UBERON:0000073,1.94e-17,54;UBERON:0002020,2.72e-17,34;UBERON:0001049,1.48e-16,52;UBERON:0005068,1.48e-16,52;UBERON:0006241,1.48e-16,52;UBERON:0007135,1.48e-16,52;UBERON:0003528,8.51e-15,29;UBERON:0002791,8.51e-15,29;UBERON:0001893,8.51e-15,29;UBERON:0003056,1.07e-14,49;UBERON:0000955,2.94e-14,47;UBERON:0006238,2.94e-14,47;UBERON:0002616,8.27e-14,46;UBERON:0003080,1.19e-12,40;UBERON:0002780,3.36e-12,39;UBERON:0001890,3.36e-12,39;UBERON:0006240,3.36e-12,39;UBERON:0000956,7.46e-11,21;UBERON:0001869,7.46e-11,21;UBERON:0000203,7.46e-11,21;UBERON:0002619,4.97e-09,17;UBERON:0004111,6.53e-08,122;UBERON:0002021,8.35e-08,10;UBERON:0000411,8.35e-08,10;UBERON:0001950,8.35e-08,10|phase1_expression=31.3891740325396,25.4752047576734,24.5699589270349,22.0798874253986,27.5492651470491,30.0503896722283,24.7629399031257,23.75869151325,17.1762241025033,17.5548394741495,22.0871179010901,20.7407613387875,26.3649124094057,27.1003247498892,30.9792078488566,23.6896062846096,20.2872944657163,34.0699138586897,31.9476630301371,28.8584963222661,75.3483550738478,23.333373532208,21.6795824985316,20.7990149631429,17.2056960800378,25.8404383851759,27.1380057580217,23.4863643627619,20.332505881832,18.6502296022349,25.0555477040494,26.6712882853045,30.7532393792285,15.8481681015439,17.0422455653252,18.9507495708681,18.1710727073509,17.5783284909501,32.8160844699996,39.2642807980349,16.4704816648684,20.4913645487534,25.7320487106511,19.8916972401412,20.4781401063419,18.7217687204915,26.6013057078333,25.9449936092731,21.9686182734472,34.6085220352224,40.4560758497298,20.125359011096,34.5632168478937,26.8383992544197,26.2153163331122,19.8089765747679,31.805211833202,32.4873418134789,63.9320016316329,61.8919445748278,69.0876229821735,17.958760199664,22.2323699027785,17.997994345628,13.8441290759376,14.209602298922,19.1744070731779,14.2160772968975,52.0521853788558,63.8578088308897,60.573588869198,58.5584518027797,53.0084498283872,63.6952155917761,63.6413927561089,74.4567217154117,31.9336054898227,66.1420411281272,64.975563567391,78.9998863503861,70.8114361482651,67.7187381723788,59.7451617862955,43.895483582471,56.0769569340893,45.0781735774712,61.2198227436143,65.9854038221564,22.4149532266225,21.3867515102203,33.9141451780963,22.371020801516,23.1190253460635,26.445456390253,33.7883737072788,47.0428231452202,46.9084363240051,22.3263722577256,20.2633083590238,30.3872034078893,28.4503707948895,38.4979432242953,25.4805239706646,28.4426681261332,24.8964697162896,21.2822286999083,26.7927955857835,31.7431185618987,31.3314839213078,17.2192881315197,19.4303565978072,23.1393763517227,24.9064737036543,23.964899847867,21.0483785772912,23.7509857613087,19.7755974187499,28.1968745993828,16.8076004870476,26.6915302413225,43.2849376182371,38.7900202508178,24.2309289583559,66.7540217186328,57.3883976668867,17.6265368093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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18970 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K409 | |||
|association_with_transcript=0bp_to_ENSMUST00000033938,NM_011130,uc009ldk.2_5end | |||
|cluster_id=chr8:23763878..23763930,- | |||
|description=CAGE_peak_1_at_Polb_5end | |||
|id=chr8:23763878..23763930,- | |||
|ontology_enrichment_celltype=CL:0000540!1.91e-14!33;CL:0000047!1.91e-14!33;CL:0000031!1.91e-14!33;CL:0000404!1.91e-14!33;CL:0000117!1.18e-12!23;CL:0000337!1.18e-12!23;CL:0000393!9.66e-11!39;CL:0000211!9.66e-11!39;CL:0002319!2.88e-09!43;CL:0000221!3.97e-09!44;CL:0000133!3.97e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.91e-14,33;CL:0000047,1.91e-14,33;CL:0000031,1.91e-14,33;CL:0000404,1.91e-14,33;CL:0000117,1.18e-12,23;CL:0000337,1.18e-12,23;CL:0000393,9.66e-11,39;CL:0000211,9.66e-11,39;CL:0002319,2.88e-09,43;CL:0000221,3.97e-09,44;CL:0000133,3.97e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.71e-21!102;UBERON:0000924!9.71e-21!102;UBERON:0006601!9.71e-21!102;UBERON:0001017!4.27e-20!73;UBERON:0005743!4.27e-20!73;UBERON:0000073!7.67e-19!75;UBERON:0001016!7.67e-19!75;UBERON:0000033!2.65e-18!63;UBERON:0002020!2.72e-17!34;UBERON:0001049!1.48e-16!52;UBERON:0005068!1.48e-16!52;UBERON:0006241!1.48e-16!52;UBERON:0007135!1.48e-16!52;UBERON:0002346!2.04e-15!71;UBERON:0003075!2.04e-15!71;UBERON:0007284!2.04e-15!71;UBERON:0000955!2.14e-15!50;UBERON:0006238!2.14e-15!50;UBERON:0002616!6.14e-15!49;UBERON:0002791!8.51e-15!29;UBERON:0003528!8.51e-15!29;UBERON:0001893!8.51e-15!29;UBERON:0003056!1.07e-14!49;UBERON:0003080!1.19e-12!40;UBERON:0002780!3.36e-12!39;UBERON:0001890!3.36e-12!39;UBERON:0006240!3.36e-12!39;UBERON:0000153!3.10e-11!94;UBERON:0007811!5.60e-11!86;UBERON:0000956!7.46e-11!21;UBERON:0001869!7.46e-11!21;UBERON:0000203!7.46e-11!21;UBERON:0002619!4.97e-09!17;UBERON:0004111!6.53e-08!122;UBERON:0002021!8.35e-08!10;UBERON:0000411!8.35e-08!10;UBERON:0001950!8.35e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.48e-25,95;UBERON:0000924,8.48e-25,95;UBERON:0006601,8.48e-25,95;UBERON:0010371,8.10e-23,73;UBERON:0001017,4.27e-20,73;UBERON:0002346,8.86e-20,64;UBERON:0003075,8.86e-20,64;UBERON:0007284,8.86e-20,64;UBERON:0001016,7.67e-19,75;UBERON:0010314,1.57e-17,92;UBERON:0000073,1.94e-17,54;UBERON:0002020,2.72e-17,34;UBERON:0001049,1.48e-16,52;UBERON:0005068,1.48e-16,52;UBERON:0006241,1.48e-16,52;UBERON:0007135,1.48e-16,52;UBERON:0003528,8.51e-15,29;UBERON:0002791,8.51e-15,29;UBERON:0001893,8.51e-15,29;UBERON:0003056,1.07e-14,49;UBERON:0000955,2.94e-14,47;UBERON:0006238,2.94e-14,47;UBERON:0002616,8.27e-14,46;UBERON:0003080,1.19e-12,40;UBERON:0002780,3.36e-12,39;UBERON:0001890,3.36e-12,39;UBERON:0006240,3.36e-12,39;UBERON:0000956,7.46e-11,21;UBERON:0001869,7.46e-11,21;UBERON:0000203,7.46e-11,21;UBERON:0002619,4.97e-09,17;UBERON:0004111,6.53e-08,122;UBERON:0002021,8.35e-08,10;UBERON:0000411,8.35e-08,10;UBERON:0001950,8.35e-08,10 | |||
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| |||
|short_description=p1@Polb | |||
}} |
Latest revision as of 20:15, 1 October 2015
Short description: | p1@Polb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Polb_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000033938, NM_011130, uc009ldk.2_5end |
EntrezGene: | Polb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.91e-14 | 33 |
neuronal stem cell | 1.91e-14 | 33 |
neuroblast | 1.91e-14 | 33 |
electrically signaling cell | 1.91e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.18e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.18e-12 | 23 |
electrically responsive cell | 9.66e-11 | 39 |
electrically active cell | 9.66e-11 | 39 |
neural cell | 2.88e-09 | 43 |
ectodermal cell | 3.97e-09 | 44 |
neurectodermal cell | 3.97e-09 | 44 |