FFCP PHASE1:Mm9::chr6:86321483..86321544,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=666609,68011 | |EntrezGene=666609,68011 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=565 | |MCL_coexpression_id=565 | ||
|TSSclassifier=NA | |||
|UniProt=P62309 | |UniProt=P62309 | ||
|association_with_transcript=0bp_to_ENSMUST00000089558,NM_026506,uc009crm.1_5end | |association_with_transcript=0bp_to_ENSMUST00000089558,NM_026506,uc009crm.1_5end | ||
|cluster_id=chr6:86321483..86321544,+ | |||
|description=CAGE_peak_1_at_Gm8186_5end,CAGE_peak_1_at_Snrpg_5end | |description=CAGE_peak_1_at_Gm8186_5end,CAGE_peak_1_at_Snrpg_5end | ||
|id=chr6:86321483..86321544,+ | |id=chr6:86321483..86321544,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.05e-13!32;CL:0002032!1.05e-13!32;CL:0000037!1.05e-13!32;CL:0000566!1.05e-13!32;CL:0000837!1.05e-13!32;CL:0002320!2.83e-12!46;CL:0000134!2.83e-12!46;CL:0000219!7.54e-12!54;CL:0000063!3.63e-10!66;CL:0002031!1.82e-09!25;CL:0000049!5.57e-09!19;CL:0000034!7.38e-09!97;CL:0000144!9.70e-08!121;CL:0000012!9.70e-08!121;CL:0002371!3.61e-07!118;CL:0000723!3.62e-07!91;CL:0000048!3.62e-07!91;CL:0000763!4.60e-07!16 | |ontology_enrichment_celltype=CL:0000988!1.05e-13!32;CL:0002032!1.05e-13!32;CL:0000037!1.05e-13!32;CL:0000566!1.05e-13!32;CL:0000837!1.05e-13!32;CL:0002320!2.83e-12!46;CL:0000134!2.83e-12!46;CL:0000219!7.54e-12!54;CL:0000063!3.63e-10!66;CL:0002031!1.82e-09!25;CL:0000049!5.57e-09!19;CL:0000034!7.38e-09!97;CL:0000144!9.70e-08!121;CL:0000012!9.70e-08!121;CL:0002371!3.61e-07!118;CL:0000723!3.62e-07!91;CL:0000048!3.62e-07!91;CL:0000763!4.60e-07!16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.05e-13,32;CL:0002032,1.05e-13,32;CL:0000037,1.05e-13,32;CL:0000837,1.05e-13,32;CL:0002320,2.83e-12,46;CL:0000134,2.83e-12,46;CL:0000219,7.54e-12,54;CL:0002031,1.82e-09,25;CL:0000049,5.57e-09,19;CL:0000034,7.38e-09,97;CL:0000723,3.62e-07,91;CL:0000048,3.62e-07,91;CL:0000763,4.60e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.83e-12!46;UBERON:0002193!1.86e-10!48;UBERON:0002390!2.73e-10!45;UBERON:0003061!2.73e-10!45;UBERON:0002405!6.73e-08!70 | |ontology_enrichment_uberon=UBERON:0002384!2.83e-12!46;UBERON:0002193!1.86e-10!48;UBERON:0002390!2.73e-10!45;UBERON:0003061!2.73e-10!45;UBERON:0002405!6.73e-08!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.83e-12,46;UBERON:0002193,1.86e-10,48;UBERON:0002405,1.86e-10,48;UBERON:0002390,2.73e-10,45;UBERON:0003061,2.73e-10,45;UBERON:0000926,6.15e-07,120;UBERON:0004120,6.15e-07,120;UBERON:0006603,6.15e-07,120 | |||
|phase1_expression=43.4003375653992,19.1936474201649,21.3849642513082,11.7961042409664,11.0197060588196,48.8528681263599,63.3090256013875,73.9876643320232,88.9784723998534,85.6676166338496,146.391362832807,133.219505522212,72.0755073010376,66.002403826343,105.928904257381,115.81585294698,144.809308772526,79.654196752955,71.0252766077727,93.3657233955666,35.5480952831472,74.3689224494631,128.771496045495,72.6365599482066,95.8930794860771,48.8097169497767,65.0450614200203,53.2213944734146,80.1898830105898,68.5521952947012,108.869680731755,113.035459875814,111.941791340392,126.785344812351,133.449448325089,153.600812311247,144.143565521233,67.802124179379,136.733685291665,131.927983481397,74.7053989799388,71.7197759206368,71.8555322486107,55.2687030912784,52.3104965092695,45.8866880404204,55.5497854487108,65.8435972268948,38.4450819785326,46.0798860806052,66.9135095369233,61.8136026769378,114.427737331376,71.0854899171118,62.8495404396408,42.1905475098953,57.5932214276901,49.5045208586345,41.8795073979367,41.2612963832186,43.7343668419264,55.2316587272685,52.4683929705572,55.343832612806,79.109309005358,68.9165711497717,64.1144236509386,66.0855485153074,47.8009112742082,47.5220902927551,56.5774146035218,39.1341848633211,42.4067598627098,61.6128720051219,65.1749202924007,54.2339084099912,15.4162233399144,18.8977260366078,21.0440950561054,36.1368428380731,37.967372095,54.174990537903,34.0603258781685,36.0168070420275,27.6564828476026,27.4004584490511,28.7590795214188,30.1967102236987,54.3714068132262,44.5872204630035,46.9580471696718,52.4858564958646,31.2786813505565,39.9380361811985,29.8897152025928,32.2579358710082,41.8524371992621,79.0796696762188,115.864558052879,107.061891076633,59.0133928864291,37.2146784501522,12.7402619853323,0,179.254581957285,161.643594173113,179.461177980248,37.9090480667279,33.144049106838,34.1416919849097,74.7721758362046,103.82272810444,73.1051126301705,97.0653805158889,61.9692486605164,59.9429640642552,28.6746162571874,24.0034932487053,60.1535175325915,30.8974683399552,37.5430581382669,43.1538975290348,59.6453635897991,18.4451902117275,21.9919042154128,46.7486411031722,152.045392998013,233.962065087429,166.080786784496,19.1732018438173,20.5875271268382,25.8847965352501,16.8609590586508,9.71718737855256,21.4021685896347,18.4955039897244,39.8191912654737,43.6668466841426,56.1044523722758,19.1502088856691,73.5180502739276,80.9255407605825,59.6005649655706,50.4861139749645,29.9360596265843,44.9679158199823,37.2932863747721,23.0245999957724,77.6044774558232,58.2446726916883,59.2955288432508,52.8261715150455,53.1070246020892,36.5664774848275,42.8026843728522,75.8320556578459,218.388301254416,187.349276379513,150.606654679664,56.7524616747275,58.631514995274,64.4622180030433,45.2182444967752,49.5845864003458,53.839222397695,40.9259742760718,38.8996432029448,33.3948879170105,31.5954911833882,35.1318373129264,21.1589592914683,27.3393976485371,22.6136618749782,21.4730270016595,16.1923260394378,26.5493899938554,13.5471701023357,66.6415427992132,77.2103466937547,72.6900782923173,59.7945020534513,57.4798045176526,49.5903037774061,58.5894928426682,55.5199002007079,39.6924480884866,40.2136334080431,37.2048602716952,36.6532483783946,48.536248067328,67.6512096107793,40.6248197438909,108.869375147069,87.4001121464426,65.3704866903866,51.1164832891739,56.8280787401143,37.6629352811011,30.3535378196435,22.5843526408791,36.1097074035162,29.1217306855449,32.0168837254121,79.4182703208608,78.2304800550548,84.7730163690899,81.3469086767897,70.9060849672105,99.5587080465351,48.9083433666378,51.2347316609112,76.3280728662866,14.3768206527355,29.3991348658118,47.7417639865278,40.4126204715379,36.776469771992,17.3679667690812,45.818791161318,93.79824882639,63.5563408123901,76.3852885988347,82.1415869009757,49.9168647176611,44.5141608456846,24.1965723343671,34.679731703362,36.3202091023991,22.0047580747332,35.2306126638837,41.9624505934126,33.1246344151661,39.2057338242108,57.6540024847832,36.8823204764277,40.5627017067957,21.1926778783885,16.6440594960929,68.5248071674503,23.4797962300067,62.7861356638351,77.3068713707344,38.9916349896366,45.88200920689,37.6529759199246,34.2522602254487,43.3147450792137,47.6377048395438,36.7617633490267,14.7807805554031,45.2788871814377,50.5706314415005,39.4186441635654,38.6030087755733,33.1862845849907,84.7304420180885,99.4644502414031,82.6090249330834,49.6107180039698,43.0409207121498,17.3146956422708,43.2605138078232,50.9791251090152,35.0800801308756,10.5418608574999,21.6584640821192,31.3204437293485,68.4232157318979,59.8930705914153,63.4437623693513,52.1380286908284,42.2734097716907,47.2255689128087,30.4464949114599,49.9850738175703,41.0954217475811,33.9613733004641,28.6902080118175,29.2250612319589,36.8511971311032,39.7509905530444,26.754966658445,48.3858188805552,24.8469904694083,91.9285338692447,69.9651482395324,82.9671482616308,103.60265135258,87.3476115137351,80.3011387954895,68.161350427536,74.4541726361861,64.9539876880792,58.2349076989219,69.7520865846403,53.2697003872344,68.6913967626656,57.7083696999934,68.3474824525536,48.9557577376899,34.3011841260144,29.3166655022113,44.9763957322521,36.0376801590417,127.958297081311,69.6747104564941,90.0094188086611,46.6682852025714,72.071181500574,57.2761265413738,36.9675301734125,48.4360311619494,77.8056335638774,64.7445443813696,68.2631114831141,65.4143019700329,84.9418652065788,94.2886586773114,114.850007512371,83.9635202680488,64.3727589491298,62.0208519523039,73.697074060114,68.8591188646367,57.3837254112149,58.4791873793675,51.16538738837,62.3452733829335,43.4782076115436,28.1145675682862,103.889426179062,110.348043629655,101.570192900267,36.8992124601484,42.9792868783207,50.3666966734979,49.0903588091061,31.0974704501925,24.2843292325339,18.8733346967943,25.2074025913335,22.3409137046794,17.1270629942661,18.1294535373528,18.2256075062588,23.8670237708837,18.1256963593682,22.2636934053283,99.4282789856412,50.2771340485299,71.5373808109822,47.4058098283173,73.9934464076778,56.0722700772543,31.1145418922261,37.086310303001,38.5103051510178,31.3344542587109,34.2197054851824,29.4257092562279,36.5201879132541,29.1954694966204,27.2244122849607,30.4827962421167,23.7562868186954,24.3065617784268,34.2031297666745,30.4701764678202,45.2587413148748,31.9456451086807,36.2423008719928,35.6098720749205,28.8915797875065,34.8612184513707,28.9026197138981,36.3036201784223,32.8645955506986,21.3234063229941,26.0997039873183,25.1186430057687,23.3261694606723,28.8182524605897,39.1600420291717,26.9795424172982,34.6218780499204,27.5034949181822,35.0057647685983,35.515218478242,43.8230209322597 | |phase1_expression=43.4003375653992,19.1936474201649,21.3849642513082,11.7961042409664,11.0197060588196,48.8528681263599,63.3090256013875,73.9876643320232,88.9784723998534,85.6676166338496,146.391362832807,133.219505522212,72.0755073010376,66.002403826343,105.928904257381,115.81585294698,144.809308772526,79.654196752955,71.0252766077727,93.3657233955666,35.5480952831472,74.3689224494631,128.771496045495,72.6365599482066,95.8930794860771,48.8097169497767,65.0450614200203,53.2213944734146,80.1898830105898,68.5521952947012,108.869680731755,113.035459875814,111.941791340392,126.785344812351,133.449448325089,153.600812311247,144.143565521233,67.802124179379,136.733685291665,131.927983481397,74.7053989799388,71.7197759206368,71.8555322486107,55.2687030912784,52.3104965092695,45.8866880404204,55.5497854487108,65.8435972268948,38.4450819785326,46.0798860806052,66.9135095369233,61.8136026769378,114.427737331376,71.0854899171118,62.8495404396408,42.1905475098953,57.5932214276901,49.5045208586345,41.8795073979367,41.2612963832186,43.7343668419264,55.2316587272685,52.4683929705572,55.343832612806,79.109309005358,68.9165711497717,64.1144236509386,66.0855485153074,47.8009112742082,47.5220902927551,56.5774146035218,39.1341848633211,42.4067598627098,61.6128720051219,65.1749202924007,54.2339084099912,15.4162233399144,18.8977260366078,21.0440950561054,36.1368428380731,37.967372095,54.174990537903,34.0603258781685,36.0168070420275,27.6564828476026,27.4004584490511,28.7590795214188,30.1967102236987,54.3714068132262,44.5872204630035,46.9580471696718,52.4858564958646,31.2786813505565,39.9380361811985,29.8897152025928,32.2579358710082,41.8524371992621,79.0796696762188,115.864558052879,107.061891076633,59.0133928864291,37.2146784501522,12.7402619853323,0,179.254581957285,161.643594173113,179.461177980248,37.9090480667279,33.144049106838,34.1416919849097,74.7721758362046,103.82272810444,73.1051126301705,97.0653805158889,61.9692486605164,59.9429640642552,28.6746162571874,24.0034932487053,60.1535175325915,30.8974683399552,37.5430581382669,43.1538975290348,59.6453635897991,18.4451902117275,21.9919042154128,46.7486411031722,152.045392998013,233.962065087429,166.080786784496,19.1732018438173,20.5875271268382,25.8847965352501,16.8609590586508,9.71718737855256,21.4021685896347,18.4955039897244,39.8191912654737,43.6668466841426,56.1044523722758,19.1502088856691,73.5180502739276,80.9255407605825,59.6005649655706,50.4861139749645,29.9360596265843,44.9679158199823,37.2932863747721,23.0245999957724,77.6044774558232,58.2446726916883,59.2955288432508,52.8261715150455,53.1070246020892,36.5664774848275,42.8026843728522,75.8320556578459,218.388301254416,187.349276379513,150.606654679664,56.7524616747275,58.631514995274,64.4622180030433,45.2182444967752,49.5845864003458,53.839222397695,40.9259742760718,38.8996432029448,33.3948879170105,31.5954911833882,35.1318373129264,21.1589592914683,27.3393976485371,22.6136618749782,21.4730270016595,16.1923260394378,26.5493899938554,13.5471701023357,66.6415427992132,77.2103466937547,72.6900782923173,59.7945020534513,57.4798045176526,49.5903037774061,58.5894928426682,55.5199002007079,39.6924480884866,40.2136334080431,37.2048602716952,36.6532483783946,48.536248067328,67.6512096107793,40.6248197438909,108.869375147069,87.4001121464426,65.3704866903866,51.1164832891739,56.8280787401143,37.6629352811011,30.3535378196435,22.5843526408791,36.1097074035162,29.1217306855449,32.0168837254121,79.4182703208608,78.2304800550548,84.7730163690899,81.3469086767897,70.9060849672105,99.5587080465351,48.9083433666378,51.2347316609112,76.3280728662866,14.3768206527355,29.3991348658118,47.7417639865278,40.4126204715379,36.776469771992,17.3679667690812,45.818791161318,93.79824882639,63.5563408123901,76.3852885988347,82.1415869009757,49.9168647176611,44.5141608456846,24.1965723343671,34.679731703362,36.3202091023991,22.0047580747332,35.2306126638837,41.9624505934126,33.1246344151661,39.2057338242108,57.6540024847832,36.8823204764277,40.5627017067957,21.1926778783885,16.6440594960929,68.5248071674503,23.4797962300067,62.7861356638351,77.3068713707344,38.9916349896366,45.88200920689,37.6529759199246,34.2522602254487,43.3147450792137,47.6377048395438,36.7617633490267,14.7807805554031,45.2788871814377,50.5706314415005,39.4186441635654,38.6030087755733,33.1862845849907,84.7304420180885,99.4644502414031,82.6090249330834,49.6107180039698,43.0409207121498,17.3146956422708,43.2605138078232,50.9791251090152,35.0800801308756,10.5418608574999,21.6584640821192,31.3204437293485,68.4232157318979,59.8930705914153,63.4437623693513,52.1380286908284,42.2734097716907,47.2255689128087,30.4464949114599,49.9850738175703,41.0954217475811,33.9613733004641,28.6902080118175,29.2250612319589,36.8511971311032,39.7509905530444,26.754966658445,48.3858188805552,24.8469904694083,91.9285338692447,69.9651482395324,82.9671482616308,103.60265135258,87.3476115137351,80.3011387954895,68.161350427536,74.4541726361861,64.9539876880792,58.2349076989219,69.7520865846403,53.2697003872344,68.6913967626656,57.7083696999934,68.3474824525536,48.9557577376899,34.3011841260144,29.3166655022113,44.9763957322521,36.0376801590417,127.958297081311,69.6747104564941,90.0094188086611,46.6682852025714,72.071181500574,57.2761265413738,36.9675301734125,48.4360311619494,77.8056335638774,64.7445443813696,68.2631114831141,65.4143019700329,84.9418652065788,94.2886586773114,114.850007512371,83.9635202680488,64.3727589491298,62.0208519523039,73.697074060114,68.8591188646367,57.3837254112149,58.4791873793675,51.16538738837,62.3452733829335,43.4782076115436,28.1145675682862,103.889426179062,110.348043629655,101.570192900267,36.8992124601484,42.9792868783207,50.3666966734979,49.0903588091061,31.0974704501925,24.2843292325339,18.8733346967943,25.2074025913335,22.3409137046794,17.1270629942661,18.1294535373528,18.2256075062588,23.8670237708837,18.1256963593682,22.2636934053283,99.4282789856412,50.2771340485299,71.5373808109822,47.4058098283173,73.9934464076778,56.0722700772543,31.1145418922261,37.086310303001,38.5103051510178,31.3344542587109,34.2197054851824,29.4257092562279,36.5201879132541,29.1954694966204,27.2244122849607,30.4827962421167,23.7562868186954,24.3065617784268,34.2031297666745,30.4701764678202,45.2587413148748,31.9456451086807,36.2423008719928,35.6098720749205,28.8915797875065,34.8612184513707,28.9026197138981,36.3036201784223,32.8645955506986,21.3234063229941,26.0997039873183,25.1186430057687,23.3261694606723,28.8182524605897,39.1600420291717,26.9795424172982,34.6218780499204,27.5034949181822,35.0057647685983,35.515218478242,43.8230209322597 | ||
|short_description=p1@Gm8186,p1@Snrpg | |short_description=p1@Gm8186,p1@Snrpg | ||
}} | }} |
Latest revision as of 20:15, 1 October 2015
Short description: | p1@Gm8186, p1@Snrpg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm8186_5end, CAGE_peak_1_at_Snrpg_5end |
Coexpression cluster: | MCL_coexpression_mm9:565 |
Association with transcript: | 0bp_to_ENSMUST00000089558, NM_026506, uc009crm.1_5end |
EntrezGene: | 666609,68011 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.05e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.05e-13 | 32 |
hematopoietic stem cell | 1.05e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.05e-13 | 32 |
connective tissue cell | 2.83e-12 | 46 |
mesenchymal cell | 2.83e-12 | 46 |
motile cell | 7.54e-12 | 54 |
hematopoietic lineage restricted progenitor cell | 1.82e-09 | 25 |
common myeloid progenitor | 5.57e-09 | 19 |
stem cell | 7.38e-09 | 97 |
somatic stem cell | 3.62e-07 | 91 |
multi fate stem cell | 3.62e-07 | 91 |
myeloid cell | 4.60e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.83e-12 | 46 |
hemolymphoid system | 1.86e-10 | 48 |
immune system | 1.86e-10 | 48 |
hematopoietic system | 2.73e-10 | 45 |
blood island | 2.73e-10 | 45 |
mesoderm | 6.15e-07 | 120 |
mesoderm-derived structure | 6.15e-07 | 120 |
presumptive mesoderm | 6.15e-07 | 120 |