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FFCP PHASE1:Mm9::chr13:58907925..58907983,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18212
|EntrezGene=18212
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P15209,Q3UHE3
|UniProt=P15209,Q3UHE3
|association_with_transcript=0bp_to_ENSMUST00000109838,NM_008745,uc007quh.1,uc007qui.1_5end
|association_with_transcript=0bp_to_ENSMUST00000109838,NM_008745,uc007quh.1,uc007qui.1_5end
|cluster_id=chr13:58907925..58907983,+
|description=CAGE_peak_4_at_Ntrk2_5end
|description=CAGE_peak_4_at_Ntrk2_5end
|id=chr13:58907925..58907983,+
|id=chr13:58907925..58907983,+
|ontology_enrichment_celltype=CL:0000117!2.83e-14!23;CL:0000337!2.83e-14!23;CL:0000221!3.88e-09!44;CL:0000133!3.88e-09!44;CL:0002319!5.21e-09!43
|ontology_enrichment_celltype=CL:0000117!2.83e-14!23;CL:0000337!2.83e-14!23;CL:0000221!3.88e-09!44;CL:0000133!3.88e-09!44;CL:0002319!5.21e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,3.43e-16,23;CL:0000337,3.43e-16,23;CL:0000221,3.18e-11,44;CL:0000133,3.18e-11,44;CL:0002319,4.45e-11,43;CL:0000540,1.26e-08,33;CL:0000047,1.26e-08,33;CL:0000031,1.26e-08,33;CL:0000404,1.26e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!8.53e-28!63;UBERON:0001049!1.39e-27!52;UBERON:0005068!1.39e-27!52;UBERON:0006241!1.39e-27!52;UBERON:0007135!1.39e-27!52;UBERON:0004121!1.68e-26!102;UBERON:0000924!1.68e-26!102;UBERON:0006601!1.68e-26!102;UBERON:0000955!3.50e-26!50;UBERON:0006238!3.50e-26!50;UBERON:0001017!8.20e-26!73;UBERON:0005743!8.20e-26!73;UBERON:0002616!1.72e-25!49;UBERON:0000073!1.14e-24!75;UBERON:0001016!1.14e-24!75;UBERON:0002346!1.77e-24!71;UBERON:0003075!1.77e-24!71;UBERON:0007284!1.77e-24!71;UBERON:0003056!3.24e-21!49;UBERON:0003080!5.79e-20!40;UBERON:0002020!7.68e-20!34;UBERON:0002780!3.24e-19!39;UBERON:0001890!3.24e-19!39;UBERON:0006240!3.24e-19!39;UBERON:0002791!2.28e-16!29;UBERON:0003528!2.28e-16!29;UBERON:0001893!2.28e-16!29;UBERON:0000153!6.24e-14!94;UBERON:0007811!1.85e-13!86;UBERON:0000956!1.20e-11!21;UBERON:0001869!1.20e-11!21;UBERON:0000203!1.20e-11!21;UBERON:0002619!7.45e-10!17;UBERON:0000468!2.79e-08!333;UBERON:0003076!4.27e-08!12;UBERON:0003057!4.27e-08!12;UBERON:0004111!7.78e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.92e-33,54;UBERON:0001049,1.60e-31,52;UBERON:0005068,1.60e-31,52;UBERON:0006241,1.60e-31,52;UBERON:0007135,1.60e-31,52;UBERON:0001017,3.77e-31,73;UBERON:0004121,1.16e-30,95;UBERON:0000924,1.16e-30,95;UBERON:0006601,1.16e-30,95;UBERON:0002346,3.66e-30,64;UBERON:0003075,3.66e-30,64;UBERON:0007284,3.66e-30,64;UBERON:0010371,1.38e-29,73;UBERON:0001016,1.84e-29,75;UBERON:0000955,3.38e-27,47;UBERON:0006238,3.38e-27,47;UBERON:0002616,2.03e-26,46;UBERON:0003056,3.47e-24,49;UBERON:0003080,9.62e-23,40;UBERON:0002020,1.33e-22,34;UBERON:0002780,7.00e-22,39;UBERON:0001890,7.00e-22,39;UBERON:0006240,7.00e-22,39;UBERON:0003528,1.33e-18,29;UBERON:0002791,1.33e-18,29;UBERON:0001893,1.33e-18,29;UBERON:0010314,7.13e-17,92;UBERON:0000956,3.61e-13,21;UBERON:0001869,3.61e-13,21;UBERON:0000203,3.61e-13,21;UBERON:0002619,4.19e-11,17;UBERON:0003076,4.40e-09,12;UBERON:0003057,4.40e-09,12;UBERON:0002021,2.20e-07,10;UBERON:0000411,2.20e-07,10;UBERON:0001950,2.20e-07,10
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,6.32272953503295,10.3252505885202,10.304784650937,5.03951117851305,5.75010257459886,0,0,0,0,0,0.515672092277442,11.9366711907163,13.2247744818008,9.50747105259269,0,0.889294796111139,0,0,0,11.9840044207362,29.2005912044381,6.63613518774257,9.58542162155004,6.30974884054146,17.424710048632,16.3442720304194,9.18680994112155,9.39285615978716,10.1114066527102,29.731287869835,20.3022867555448,28.8780282521738,9.89147157976454,11.8019060247108,14.5855743755893,18.4260779340911,20.2594539611405,21.3917546887534,22.6864010814724,20.3591503542717,18.4535451367048,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,2.67602497575693,0,0,0,0,0,0,1.25602267690966,0.517875767294343,0.742210695324124,1.56136794089522,0.304465478312141,0.922461989024234,2.11011696773672,1.52865319276416,1.13099932196708,0.494389935468748,5.06097749219691,1.76922110389975,1.29413479957927,0.883366073841574,0,0,14.3462590535658,12.3573557019938,0.255457055208591,0,0,0,23.2175491077475,11.4375150704657,13.3193613239636,15.2965401769203,9.46147192122223,20.3632283668369,15.412919991437,4.9901288286655,0.622034853050465,0.505445516867349,2.52530227063769,1.82168620147785,7.12696523743766,3.60124259610698,3.91832526372859,1.42876648217788,4.48398020996974,3.37326208415024,2.32833033665114,0.646703978798527,1.70195472151037,1.93546236580344,2.41115305670332,1.66828349535359,2.78601733217733,2.88094990971121,3.38358253591438,0,0,0,0,0.938104239924385,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,0,0.268273401399619,0.233530684734339,0.493679549740441,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,16.1923260394378,7.82075054082562,0,0.264450566663544,0.213288250535234,0.696710015581316,0.515469845288373,0.201683524623343,0.667134131534611,0,0,0.329397909448022,0.502670417600539,0.596869416123452,1.36474860983384,0,0,0.199141273254367,0.379335801906163,0.456994050438915,1.1270773567308,1.22190796707189,0.387904974335251,0.841629838683823,0.442655759869801,0.147610147979602,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,1.51593129416388,0.977789858652155,0.848725428875941,0,0,0.952174563544055,0.390267295715598,0.945810864637146,1.7717175171902,2.71073106717728,2.62181303545181,2.59027472798843,3.18227928879325,0,0,0.983528546038072,1.65562047782839,18.9449696185595,17.3473296156461,0,0.757412781613119,0,0,0,0,0,0.566153061577665,0,0,0,15.7447445046685,1.98716119291576,12.6426578603751,9.93610452056814,2.3095817216155,1.32745138339963,3.15614827001476,3.62788268357701,2.07465587731488,1.77181135728464,1.53717573971964,1.29214146584111,2.90826983582004,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,4.42571487479924,1.62054984628179,3.36332577835162,3.85806663056866,3.19212420556092,4.45922044005176,5.26556865926787,3.65357938937519,0.23467170806371,0.42366414172764,1.54369878638473,1.6488625294148,1.29171541356724,1.80938774784468,2.626191568069,2.29797259643086,0.582961673259701,18.7279555030615,0,7.42992724667601,2.59272338317596,0,0,0,0,0,0,0,0.316335993581135,2.23651413839534,0.756037385752609,0.627264888043406,0,0.674321731924103,0.578574190077352,0.523511883968059,0.259229946583586,0.621339313086926,0,0.448549638131936,0.496375471371293,0.583353565032143,1.16243841129958,2.19642963138012,2.11243029562357,2.0832701575032,0.838874755405687,0.483168241652012,0.864090018773596,0,3.64905387522296,1.1298205288131,0.389762468933385,0.179026695667481,0.198681354781265,0.600977247599844,0,0.403865799792591,0,0,0,0,0,4.98806843953465,0,0,0,0.772758376128762,3.00291960721891,2.38097111547445,4.71610433973945,0,10.1655331671072,9.66682996665071,8.59343270159095,13.5764014051513,11.6464028361009,14.3524840504043,15.5255175053315,12.158672487054,12.2348450425735,17.6038505995619,1.45302286617847,5.58634822761443,5.12200817262403,3.16038732188782,2.30574478890781,2.94149613520023,2.889207461421,3.09052585858341,5.13470735346904,5.55933865880354,3.54871019846336,3.9611531691076,4.40115085108447,3.39333307745807,4.47996657853783,5.23923060411381,3.82418275618023,4.05109362973781,4.53294490883637,3.23837624295674,2.40008476669791,1.24233064311536,5.96090474868302,4.21504608233753,3.48204707536723,3.38458431566706,2.37806364734604,4.73525480588117,4.34573164306758,3.92799590160417,4.1522256343461,3.84167481264697,3.6830793885272,2.78886314134739,4.24394544158511,9.99242311751784,3.74290573512653,2.57845264857958,2.10417165275728,3.08827986767322,1.15933917810211
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,6.32272953503295,10.3252505885202,10.304784650937,5.03951117851305,5.75010257459886,0,0,0,0,0,0.515672092277442,11.9366711907163,13.2247744818008,9.50747105259269,0,0.889294796111139,0,0,0,11.9840044207362,29.2005912044381,6.63613518774257,9.58542162155004,6.30974884054146,17.424710048632,16.3442720304194,9.18680994112155,9.39285615978716,10.1114066527102,29.731287869835,20.3022867555448,28.8780282521738,9.89147157976454,11.8019060247108,14.5855743755893,18.4260779340911,20.2594539611405,21.3917546887534,22.6864010814724,20.3591503542717,18.4535451367048,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,2.67602497575693,0,0,0,0,0,0,1.25602267690966,0.517875767294343,0.742210695324124,1.56136794089522,0.304465478312141,0.922461989024234,2.11011696773672,1.52865319276416,1.13099932196708,0.494389935468748,5.06097749219691,1.76922110389975,1.29413479957927,0.883366073841574,0,0,14.3462590535658,12.3573557019938,0.255457055208591,0,0,0,23.2175491077475,11.4375150704657,13.3193613239636,15.2965401769203,9.46147192122223,20.3632283668369,15.412919991437,4.9901288286655,0.622034853050465,0.505445516867349,2.52530227063769,1.82168620147785,7.12696523743766,3.60124259610698,3.91832526372859,1.42876648217788,4.48398020996974,3.37326208415024,2.32833033665114,0.646703978798527,1.70195472151037,1.93546236580344,2.41115305670332,1.66828349535359,2.78601733217733,2.88094990971121,3.38358253591438,0,0,0,0,0.938104239924385,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,0,0.268273401399619,0.233530684734339,0.493679549740441,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,16.1923260394378,7.82075054082562,0,0.264450566663544,0.213288250535234,0.696710015581316,0.515469845288373,0.201683524623343,0.667134131534611,0,0,0.329397909448022,0.502670417600539,0.596869416123452,1.36474860983384,0,0,0.199141273254367,0.379335801906163,0.456994050438915,1.1270773567308,1.22190796707189,0.387904974335251,0.841629838683823,0.442655759869801,0.147610147979602,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,1.51593129416388,0.977789858652155,0.848725428875941,0,0,0.952174563544055,0.390267295715598,0.945810864637146,1.7717175171902,2.71073106717728,2.62181303545181,2.59027472798843,3.18227928879325,0,0,0.983528546038072,1.65562047782839,18.9449696185595,17.3473296156461,0,0.757412781613119,0,0,0,0,0,0.566153061577665,0,0,0,15.7447445046685,1.98716119291576,12.6426578603751,9.93610452056814,2.3095817216155,1.32745138339963,3.15614827001476,3.62788268357701,2.07465587731488,1.77181135728464,1.53717573971964,1.29214146584111,2.90826983582004,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,4.42571487479924,1.62054984628179,3.36332577835162,3.85806663056866,3.19212420556092,4.45922044005176,5.26556865926787,3.65357938937519,0.23467170806371,0.42366414172764,1.54369878638473,1.6488625294148,1.29171541356724,1.80938774784468,2.626191568069,2.29797259643086,0.582961673259701,18.7279555030615,0,7.42992724667601,2.59272338317596,0,0,0,0,0,0,0,0.316335993581135,2.23651413839534,0.756037385752609,0.627264888043406,0,0.674321731924103,0.578574190077352,0.523511883968059,0.259229946583586,0.621339313086926,0,0.448549638131936,0.496375471371293,0.583353565032143,1.16243841129958,2.19642963138012,2.11243029562357,2.0832701575032,0.838874755405687,0.483168241652012,0.864090018773596,0,3.64905387522296,1.1298205288131,0.389762468933385,0.179026695667481,0.198681354781265,0.600977247599844,0,0.403865799792591,0,0,0,0,0,4.98806843953465,0,0,0,0.772758376128762,3.00291960721891,2.38097111547445,4.71610433973945,0,10.1655331671072,9.66682996665071,8.59343270159095,13.5764014051513,11.6464028361009,14.3524840504043,15.5255175053315,12.158672487054,12.2348450425735,17.6038505995619,1.45302286617847,5.58634822761443,5.12200817262403,3.16038732188782,2.30574478890781,2.94149613520023,2.889207461421,3.09052585858341,5.13470735346904,5.55933865880354,3.54871019846336,3.9611531691076,4.40115085108447,3.39333307745807,4.47996657853783,5.23923060411381,3.82418275618023,4.05109362973781,4.53294490883637,3.23837624295674,2.40008476669791,1.24233064311536,5.96090474868302,4.21504608233753,3.48204707536723,3.38458431566706,2.37806364734604,4.73525480588117,4.34573164306758,3.92799590160417,4.1522256343461,3.84167481264697,3.6830793885272,2.78886314134739,4.24394544158511,9.99242311751784,3.74290573512653,2.57845264857958,2.10417165275728,3.08827986767322,1.15933917810211
|short_description=p4@Ntrk2
|short_description=p4@Ntrk2
}}
}}

Latest revision as of 20:00, 1 October 2015

Short description:p4@Ntrk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ntrk2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000109838, NM_008745, uc007quh.1, uc007qui.1_5end
EntrezGene:Ntrk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ntrk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.32
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C311.94
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C811.98
Mouse Microglia, donor2.CNhs12634.11736-123E829.20
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.39
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.88
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.69
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.45
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I212.36
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A423.22
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F113.32
cortex, adult.CNhs10473.12-14D515.30
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F220.36
diencephalon, neonate N30.CNhs11201.1388-42B215.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E74.48
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E816.19
hippocampus, neonate N00.CNhs11228.627-43G17.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C218.94
medulla oblongata, neonate N30.CNhs11200.1396-42A317.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H712.64
ovary, neonate N00.CNhs11217.1299-22I49.94
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C918.73
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C17.43
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.43e-1623
neuroblast (sensu Vertebrata)3.43e-1623
ectodermal cell3.18e-1144
neurectodermal cell3.18e-1144
neural cell4.45e-1143
neuron1.26e-0833
neuronal stem cell1.26e-0833
neuroblast1.26e-0833
electrically signaling cell1.26e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.92e-3354
neural tube1.60e-3152
neural rod1.60e-3152
future spinal cord1.60e-3152
neural keel1.60e-3152
central nervous system3.77e-3173
ectoderm-derived structure1.16e-3095
ectoderm1.16e-3095
presumptive ectoderm1.16e-3095
neurectoderm3.66e-3064
neural plate3.66e-3064
presumptive neural plate3.66e-3064
ecto-epithelium1.38e-2973
nervous system1.84e-2975
brain3.38e-2747
future brain3.38e-2747
regional part of brain2.03e-2646
pre-chordal neural plate3.47e-2449
anterior neural tube9.62e-2340
gray matter1.33e-2234
regional part of forebrain7.00e-2239
forebrain7.00e-2239
future forebrain7.00e-2239
brain grey matter1.33e-1829
regional part of telencephalon1.33e-1829
telencephalon1.33e-1829
structure with developmental contribution from neural crest7.13e-1792
cerebral cortex3.61e-1321
cerebral hemisphere3.61e-1321
pallium3.61e-1321
regional part of cerebral cortex4.19e-1117
posterior neural tube4.40e-0912
chordal neural plate4.40e-0912
occipital lobe2.20e-0710
visual cortex2.20e-0710
neocortex2.20e-0710
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