FFCP PHASE1:Mm9::chr13:58907925..58907983,+: Difference between revisions
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{{FFCP|EntrezGene=18212|HGNC=|MCL_coexpression_id=1|UniProt=P15209,Q3UHE3|association_with_transcript=0bp_to_ENSMUST00000109838,NM_008745,uc007quh.1,uc007qui.1_5end|description=CAGE_peak_4_at_Ntrk2_5end|id=chr13:58907925..58907983,+|ontology_enrichment_celltype=CL:0000117!2.83e-14!23;CL:0000337!2.83e-14!23;CL:0000221!3.88e-09!44;CL:0000133!3.88e-09!44;CL:0002319!5.21e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.43e-16,23;CL:0000337,3.43e-16,23;CL:0000221,3.18e-11,44;CL:0000133,3.18e-11,44;CL:0002319,4.45e-11,43;CL:0000540,1.26e-08,33;CL:0000047,1.26e-08,33;CL:0000031,1.26e-08,33;CL:0000404,1.26e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!8.53e-28!63;UBERON:0001049!1.39e-27!52;UBERON:0005068!1.39e-27!52;UBERON:0006241!1.39e-27!52;UBERON:0007135!1.39e-27!52;UBERON:0004121!1.68e-26!102;UBERON:0000924!1.68e-26!102;UBERON:0006601!1.68e-26!102;UBERON:0000955!3.50e-26!50;UBERON:0006238!3.50e-26!50;UBERON:0001017!8.20e-26!73;UBERON:0005743!8.20e-26!73;UBERON:0002616!1.72e-25!49;UBERON:0000073!1.14e-24!75;UBERON:0001016!1.14e-24!75;UBERON:0002346!1.77e-24!71;UBERON:0003075!1.77e-24!71;UBERON:0007284!1.77e-24!71;UBERON:0003056!3.24e-21!49;UBERON:0003080!5.79e-20!40;UBERON:0002020!7.68e-20!34;UBERON:0002780!3.24e-19!39;UBERON:0001890!3.24e-19!39;UBERON:0006240!3.24e-19!39;UBERON:0002791!2.28e-16!29;UBERON:0003528!2.28e-16!29;UBERON:0001893!2.28e-16!29;UBERON:0000153!6.24e-14!94;UBERON:0007811!1.85e-13!86;UBERON:0000956!1.20e-11!21;UBERON:0001869!1.20e-11!21;UBERON:0000203!1.20e-11!21;UBERON:0002619!7.45e-10!17;UBERON:0000468!2.79e-08!333;UBERON:0003076!4.27e-08!12;UBERON:0003057!4.27e-08!12;UBERON:0004111!7.78e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.92e-33,54;UBERON:0001049,1.60e-31,52;UBERON:0005068,1.60e-31,52;UBERON:0006241,1.60e-31,52;UBERON:0007135,1.60e-31,52;UBERON:0001017,3.77e-31,73;UBERON:0004121,1.16e-30,95;UBERON:0000924,1.16e-30,95;UBERON:0006601,1.16e-30,95;UBERON:0002346,3.66e-30,64;UBERON:0003075,3.66e-30,64;UBERON:0007284,3.66e-30,64;UBERON:0010371,1.38e-29,73;UBERON:0001016,1.84e-29,75;UBERON:0000955,3.38e-27,47;UBERON:0006238,3.38e-27,47;UBERON:0002616,2.03e-26,46;UBERON:0003056,3.47e-24,49;UBERON:0003080,9.62e-23,40;UBERON:0002020,1.33e-22,34;UBERON:0002780,7.00e-22,39;UBERON:0001890,7.00e-22,39;UBERON:0006240,7.00e-22,39;UBERON:0003528,1.33e-18,29;UBERON:0002791,1.33e-18,29;UBERON:0001893,1.33e-18,29;UBERON:0010314,7.13e-17,92;UBERON:0000956,3.61e-13,21;UBERON:0001869,3.61e-13,21;UBERON:0000203,3.61e-13,21;UBERON:0002619,4.19e-11,17;UBERON:0003076,4.40e-09,12;UBERON:0003057,4.40e-09,12;UBERON:0002021,2.20e-07,10;UBERON:0000411,2.20e-07,10;UBERON:0001950,2.20e-07,10|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,6.32272953503295,10.3252505885202,10.304784650937,5.03951117851305,5.75010257459886,0,0,0,0,0,0.515672092277442,11.9366711907163,13.2247744818008,9.50747105259269,0,0.889294796111139,0,0,0,11.9840044207362,29.2005912044381,6.63613518774257,9.58542162155004,6.30974884054146,17.424710048632,16.3442720304194,9.18680994112155,9.39285615978716,10.1114066527102,29.731287869835,20.3022867555448,28.8780282521738,9.89147157976454,11.8019060247108,14.5855743755893,18.4260779340911,20.2594539611405,21.3917546887534,22.6864010814724,20.3591503542717,18.4535451367048,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,2.67602497575693,0,0,0,0,0,0,1.25602267690966,0.517875767294343,0.742210695324124,1.56136794089522,0.304465478312141,0.922461989024234,2.11011696773672,1.52865319276416,1.13099932196708,0.494389935468748,5.06097749219691,1.76922110389975,1.29413479957927,0.883366073841574,0,0,14.3462590535658,12.3573557019938,0.255457055208591,0,0,0,23.2175491077475,11.4375150704657,13.3193613239636,15.2965401769203,9.46147192122223,20.3632283668369,15.412919991437,4.9901288286655,0.622034853050465,0.505445516867349,2.52530227063769,1.82168620147785,7.12696523743766,3.60124259610698,3.91832526372859,1.42876648217788,4.48398020996974,3.37326208415024,2.32833033665114,0.646703978798527,1.70195472151037,1.93546236580344,2.41115305670332,1.66828349535359,2.78601733217733,2.88094990971121,3.38358253591438,0,0,0,0,0.938104239924385,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,0,0.268273401399619,0.233530684734339,0.493679549740441,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,16.1923260394378,7.82075054082562,0,0.264450566663544,0.213288250535234,0.696710015581316,0.515469845288373,0.201683524623343,0.667134131534611,0,0,0.329397909448022,0.502670417600539,0.596869416123452,1.36474860983384,0,0,0.199141273254367,0.379335801906163,0.456994050438915,1.1270773567308,1.22190796707189,0.387904974335251,0.841629838683823,0.442655759869801,0.147610147979602,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0,0.202860121388503,0,0.25462585178142,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18212 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P15209,Q3UHE3 | |||
|association_with_transcript=0bp_to_ENSMUST00000109838,NM_008745,uc007quh.1,uc007qui.1_5end | |||
|cluster_id=chr13:58907925..58907983,+ | |||
|description=CAGE_peak_4_at_Ntrk2_5end | |||
|id=chr13:58907925..58907983,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.83e-14!23;CL:0000337!2.83e-14!23;CL:0000221!3.88e-09!44;CL:0000133!3.88e-09!44;CL:0002319!5.21e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.43e-16,23;CL:0000337,3.43e-16,23;CL:0000221,3.18e-11,44;CL:0000133,3.18e-11,44;CL:0002319,4.45e-11,43;CL:0000540,1.26e-08,33;CL:0000047,1.26e-08,33;CL:0000031,1.26e-08,33;CL:0000404,1.26e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.53e-28!63;UBERON:0001049!1.39e-27!52;UBERON:0005068!1.39e-27!52;UBERON:0006241!1.39e-27!52;UBERON:0007135!1.39e-27!52;UBERON:0004121!1.68e-26!102;UBERON:0000924!1.68e-26!102;UBERON:0006601!1.68e-26!102;UBERON:0000955!3.50e-26!50;UBERON:0006238!3.50e-26!50;UBERON:0001017!8.20e-26!73;UBERON:0005743!8.20e-26!73;UBERON:0002616!1.72e-25!49;UBERON:0000073!1.14e-24!75;UBERON:0001016!1.14e-24!75;UBERON:0002346!1.77e-24!71;UBERON:0003075!1.77e-24!71;UBERON:0007284!1.77e-24!71;UBERON:0003056!3.24e-21!49;UBERON:0003080!5.79e-20!40;UBERON:0002020!7.68e-20!34;UBERON:0002780!3.24e-19!39;UBERON:0001890!3.24e-19!39;UBERON:0006240!3.24e-19!39;UBERON:0002791!2.28e-16!29;UBERON:0003528!2.28e-16!29;UBERON:0001893!2.28e-16!29;UBERON:0000153!6.24e-14!94;UBERON:0007811!1.85e-13!86;UBERON:0000956!1.20e-11!21;UBERON:0001869!1.20e-11!21;UBERON:0000203!1.20e-11!21;UBERON:0002619!7.45e-10!17;UBERON:0000468!2.79e-08!333;UBERON:0003076!4.27e-08!12;UBERON:0003057!4.27e-08!12;UBERON:0004111!7.78e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.92e-33,54;UBERON:0001049,1.60e-31,52;UBERON:0005068,1.60e-31,52;UBERON:0006241,1.60e-31,52;UBERON:0007135,1.60e-31,52;UBERON:0001017,3.77e-31,73;UBERON:0004121,1.16e-30,95;UBERON:0000924,1.16e-30,95;UBERON:0006601,1.16e-30,95;UBERON:0002346,3.66e-30,64;UBERON:0003075,3.66e-30,64;UBERON:0007284,3.66e-30,64;UBERON:0010371,1.38e-29,73;UBERON:0001016,1.84e-29,75;UBERON:0000955,3.38e-27,47;UBERON:0006238,3.38e-27,47;UBERON:0002616,2.03e-26,46;UBERON:0003056,3.47e-24,49;UBERON:0003080,9.62e-23,40;UBERON:0002020,1.33e-22,34;UBERON:0002780,7.00e-22,39;UBERON:0001890,7.00e-22,39;UBERON:0006240,7.00e-22,39;UBERON:0003528,1.33e-18,29;UBERON:0002791,1.33e-18,29;UBERON:0001893,1.33e-18,29;UBERON:0010314,7.13e-17,92;UBERON:0000956,3.61e-13,21;UBERON:0001869,3.61e-13,21;UBERON:0000203,3.61e-13,21;UBERON:0002619,4.19e-11,17;UBERON:0003076,4.40e-09,12;UBERON:0003057,4.40e-09,12;UBERON:0002021,2.20e-07,10;UBERON:0000411,2.20e-07,10;UBERON:0001950,2.20e-07,10 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,6.32272953503295,10.3252505885202,10.304784650937,5.03951117851305,5.75010257459886,0,0,0,0,0,0.515672092277442,11.9366711907163,13.2247744818008,9.50747105259269,0,0.889294796111139,0,0,0,11.9840044207362,29.2005912044381,6.63613518774257,9.58542162155004,6.30974884054146,17.424710048632,16.3442720304194,9.18680994112155,9.39285615978716,10.1114066527102,29.731287869835,20.3022867555448,28.8780282521738,9.89147157976454,11.8019060247108,14.5855743755893,18.4260779340911,20.2594539611405,21.3917546887534,22.6864010814724,20.3591503542717,18.4535451367048,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,2.67602497575693,0,0,0,0,0,0,1.25602267690966,0.517875767294343,0.742210695324124,1.56136794089522,0.304465478312141,0.922461989024234,2.11011696773672,1.52865319276416,1.13099932196708,0.494389935468748,5.06097749219691,1.76922110389975,1.29413479957927,0.883366073841574,0,0,14.3462590535658,12.3573557019938,0.255457055208591,0,0,0,23.2175491077475,11.4375150704657,13.3193613239636,15.2965401769203,9.46147192122223,20.3632283668369,15.412919991437,4.9901288286655,0.622034853050465,0.505445516867349,2.52530227063769,1.82168620147785,7.12696523743766,3.60124259610698,3.91832526372859,1.42876648217788,4.48398020996974,3.37326208415024,2.32833033665114,0.646703978798527,1.70195472151037,1.93546236580344,2.41115305670332,1.66828349535359,2.78601733217733,2.88094990971121,3.38358253591438,0,0,0,0,0.938104239924385,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,0,0.268273401399619,0.233530684734339,0.493679549740441,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,16.1923260394378,7.82075054082562,0,0.264450566663544,0.213288250535234,0.696710015581316,0.515469845288373,0.201683524623343,0.667134131534611,0,0,0.329397909448022,0.502670417600539,0.596869416123452,1.36474860983384,0,0,0.199141273254367,0.379335801906163,0.456994050438915,1.1270773567308,1.22190796707189,0.387904974335251,0.841629838683823,0.442655759869801,0.147610147979602,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,1.51593129416388,0.977789858652155,0.848725428875941,0,0,0.952174563544055,0.390267295715598,0.945810864637146,1.7717175171902,2.71073106717728,2.62181303545181,2.59027472798843,3.18227928879325,0,0,0.983528546038072,1.65562047782839,18.9449696185595,17.3473296156461,0,0.757412781613119,0,0,0,0,0,0.566153061577665,0,0,0,15.7447445046685,1.98716119291576,12.6426578603751,9.93610452056814,2.3095817216155,1.32745138339963,3.15614827001476,3.62788268357701,2.07465587731488,1.77181135728464,1.53717573971964,1.29214146584111,2.90826983582004,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,4.42571487479924,1.62054984628179,3.36332577835162,3.85806663056866,3.19212420556092,4.45922044005176,5.26556865926787,3.65357938937519,0.23467170806371,0.42366414172764,1.54369878638473,1.6488625294148,1.29171541356724,1.80938774784468,2.626191568069,2.29797259643086,0.582961673259701,18.7279555030615,0,7.42992724667601,2.59272338317596,0,0,0,0,0,0,0,0.316335993581135,2.23651413839534,0.756037385752609,0.627264888043406,0,0.674321731924103,0.578574190077352,0.523511883968059,0.259229946583586,0.621339313086926,0,0.448549638131936,0.496375471371293,0.583353565032143,1.16243841129958,2.19642963138012,2.11243029562357,2.0832701575032,0.838874755405687,0.483168241652012,0.864090018773596,0,3.64905387522296,1.1298205288131,0.389762468933385,0.179026695667481,0.198681354781265,0.600977247599844,0,0.403865799792591,0,0,0,0,0,4.98806843953465,0,0,0,0.772758376128762,3.00291960721891,2.38097111547445,4.71610433973945,0,10.1655331671072,9.66682996665071,8.59343270159095,13.5764014051513,11.6464028361009,14.3524840504043,15.5255175053315,12.158672487054,12.2348450425735,17.6038505995619,1.45302286617847,5.58634822761443,5.12200817262403,3.16038732188782,2.30574478890781,2.94149613520023,2.889207461421,3.09052585858341,5.13470735346904,5.55933865880354,3.54871019846336,3.9611531691076,4.40115085108447,3.39333307745807,4.47996657853783,5.23923060411381,3.82418275618023,4.05109362973781,4.53294490883637,3.23837624295674,2.40008476669791,1.24233064311536,5.96090474868302,4.21504608233753,3.48204707536723,3.38458431566706,2.37806364734604,4.73525480588117,4.34573164306758,3.92799590160417,4.1522256343461,3.84167481264697,3.6830793885272,2.78886314134739,4.24394544158511,9.99242311751784,3.74290573512653,2.57845264857958,2.10417165275728,3.08827986767322,1.15933917810211 | |||
|short_description=p4@Ntrk2 | |||
}} |
Latest revision as of 20:00, 1 October 2015
Short description: | p4@Ntrk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ntrk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000109838, NM_008745, uc007quh.1, uc007qui.1_5end |
EntrezGene: | Ntrk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.43e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.43e-16 | 23 |
ectodermal cell | 3.18e-11 | 44 |
neurectodermal cell | 3.18e-11 | 44 |
neural cell | 4.45e-11 | 43 |
neuron | 1.26e-08 | 33 |
neuronal stem cell | 1.26e-08 | 33 |
neuroblast | 1.26e-08 | 33 |
electrically signaling cell | 1.26e-08 | 33 |