FFCP PHASE1:Mm9::chrX:34138194..34138209,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53328 | |EntrezGene=53328 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |MCL_coexpression_id=8 | ||
|TSSclassifier=NA | |||
|UniProt=O55022,Q3TFP8 | |UniProt=O55022,Q3TFP8 | ||
|association_with_transcript=0bp_to_ENSMUST00000073339,ENSMUST00000166283_5end | |association_with_transcript=0bp_to_ENSMUST00000073339,ENSMUST00000166283_5end | ||
|cluster_id=chrX:34138194..34138209,+ | |||
|description=CAGE_peak_1_at_Pgrmc1_5end | |description=CAGE_peak_1_at_Pgrmc1_5end | ||
|id=chrX:34138194..34138209,+ | |id=chrX:34138194..34138209,+ | ||
|ontology_enrichment_celltype=CL:0002321!8.39e-13!70;CL:0000220!8.39e-13!70;CL:0000117!1.56e-10!23;CL:0000337!1.56e-10!23;CL:0000055!1.75e-08!50;CL:0000393!7.56e-08!39;CL:0000211!7.56e-08!39;CL:0000221!9.20e-07!44;CL:0000133!9.20e-07!44 | |ontology_enrichment_celltype=CL:0002321!8.39e-13!70;CL:0000220!8.39e-13!70;CL:0000117!1.56e-10!23;CL:0000337!1.56e-10!23;CL:0000055!1.75e-08!50;CL:0000393!7.56e-08!39;CL:0000211!7.56e-08!39;CL:0000221!9.20e-07!44;CL:0000133!9.20e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.39e-13,70;CL:0000117,1.56e-10,23;CL:0000337,1.56e-10,23;CL:0000393,7.56e-08,39;CL:0000211,7.56e-08,39;CL:0000221,9.20e-07,44;CL:0000133,9.20e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.03e-11!75;UBERON:0001016!1.03e-11!75;UBERON:0002346!1.21e-11!71;UBERON:0003075!1.21e-11!71;UBERON:0007284!1.21e-11!71;UBERON:0002020!1.23e-11!34;UBERON:0001049!1.48e-11!52;UBERON:0005068!1.48e-11!52;UBERON:0006241!1.48e-11!52;UBERON:0007135!1.48e-11!52;UBERON:0001017!2.37e-11!73;UBERON:0005743!2.37e-11!73;UBERON:0000955!6.26e-11!50;UBERON:0006238!6.26e-11!50;UBERON:0002616!1.25e-10!49;UBERON:0004121!2.04e-10!102;UBERON:0000924!2.04e-10!102;UBERON:0006601!2.04e-10!102;UBERON:0003080!6.00e-10!40;UBERON:0002780!1.16e-09!39;UBERON:0001890!1.16e-09!39;UBERON:0006240!1.16e-09!39;UBERON:0004111!2.63e-09!122;UBERON:0002791!3.35e-09!29;UBERON:0003528!3.35e-09!29;UBERON:0001893!3.35e-09!29;UBERON:0000025!4.64e-09!114;UBERON:0000033!6.09e-09!63;UBERON:0005256!1.16e-08!47;UBERON:0003056!3.04e-08!49;UBERON:0009854!4.50e-07!23;UBERON:0009856!4.50e-07!23;UBERON:0002107!7.88e-07!22;UBERON:0007499!7.88e-07!22;UBERON:0006925!7.88e-07!22;UBERON:0009497!7.88e-07!22;UBERON:0000015!7.88e-07!22;UBERON:0002423!7.88e-07!22;UBERON:0006235!7.88e-07!22;UBERON:0008835!7.88e-07!22;UBERON:0003894!7.88e-07!22;UBERON:0004161!7.88e-07!22;UBERON:0008836!7.88e-07!22 | |ontology_enrichment_uberon=UBERON:0000073!1.03e-11!75;UBERON:0001016!1.03e-11!75;UBERON:0002346!1.21e-11!71;UBERON:0003075!1.21e-11!71;UBERON:0007284!1.21e-11!71;UBERON:0002020!1.23e-11!34;UBERON:0001049!1.48e-11!52;UBERON:0005068!1.48e-11!52;UBERON:0006241!1.48e-11!52;UBERON:0007135!1.48e-11!52;UBERON:0001017!2.37e-11!73;UBERON:0005743!2.37e-11!73;UBERON:0000955!6.26e-11!50;UBERON:0006238!6.26e-11!50;UBERON:0002616!1.25e-10!49;UBERON:0004121!2.04e-10!102;UBERON:0000924!2.04e-10!102;UBERON:0006601!2.04e-10!102;UBERON:0003080!6.00e-10!40;UBERON:0002780!1.16e-09!39;UBERON:0001890!1.16e-09!39;UBERON:0006240!1.16e-09!39;UBERON:0004111!2.63e-09!122;UBERON:0002791!3.35e-09!29;UBERON:0003528!3.35e-09!29;UBERON:0001893!3.35e-09!29;UBERON:0000025!4.64e-09!114;UBERON:0000033!6.09e-09!63;UBERON:0005256!1.16e-08!47;UBERON:0003056!3.04e-08!49;UBERON:0009854!4.50e-07!23;UBERON:0009856!4.50e-07!23;UBERON:0002107!7.88e-07!22;UBERON:0007499!7.88e-07!22;UBERON:0006925!7.88e-07!22;UBERON:0009497!7.88e-07!22;UBERON:0000015!7.88e-07!22;UBERON:0002423!7.88e-07!22;UBERON:0006235!7.88e-07!22;UBERON:0008835!7.88e-07!22;UBERON:0003894!7.88e-07!22;UBERON:0004161!7.88e-07!22;UBERON:0008836!7.88e-07!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.39e-13,54;UBERON:0001016,1.03e-11,75;UBERON:0002020,1.23e-11,34;UBERON:0001049,1.48e-11,52;UBERON:0005068,1.48e-11,52;UBERON:0006241,1.48e-11,52;UBERON:0007135,1.48e-11,52;UBERON:0001017,2.37e-11,73;UBERON:0003080,6.00e-10,40;UBERON:0002780,1.16e-09,39;UBERON:0001890,1.16e-09,39;UBERON:0006240,1.16e-09,39;UBERON:0000955,1.34e-09,47;UBERON:0006238,1.34e-09,47;UBERON:0002616,2.62e-09,46;UBERON:0004111,2.63e-09,122;UBERON:0002346,2.91e-09,64;UBERON:0003075,2.91e-09,64;UBERON:0007284,2.91e-09,64;UBERON:0003528,3.35e-09,29;UBERON:0002791,3.35e-09,29;UBERON:0001893,3.35e-09,29;UBERON:0000025,4.64e-09,114;UBERON:0005256,1.79e-08,45;UBERON:0004121,2.99e-08,95;UBERON:0000924,2.99e-08,95;UBERON:0006601,2.99e-08,95;UBERON:0003056,3.04e-08,49;UBERON:0010371,3.00e-07,73;UBERON:0009854,4.50e-07,23;UBERON:0009856,4.50e-07,23;UBERON:0011216,5.29e-07,194;UBERON:0002107,7.88e-07,22;UBERON:0007499,7.88e-07,22;UBERON:0006925,7.88e-07,22;UBERON:0009497,7.88e-07,22;UBERON:0000015,7.88e-07,22;UBERON:0002423,7.88e-07,22;UBERON:0006235,7.88e-07,22;UBERON:0008835,7.88e-07,22;UBERON:0003894,7.88e-07,22;UBERON:0004161,7.88e-07,22;UBERON:0008836,7.88e-07,22 | |||
|phase1_expression=113.385383750194,220.552457628076,214.304641752471,276.452289134443,318.569684245877,66.983829492844,64.7107014449606,28.9236244509131,66.73385429989,49.8557441065846,17.4642327590015,16.59260907103,26.0225109495433,23.7783494579673,28.647439516147,23.28465574983,33.578970150151,15.7731082679119,18.373334103169,17.3999757237192,115.573831315304,27.1064296778417,34.2171723772005,136.633529065569,153.933627596071,207.297739045522,178.766228406016,123.034073863643,266.792880916749,210.193128219782,101.55257388013,4.44521471421742,9.84103660135312,31.6963362030877,51.4155883157269,70.6497242773593,53.2882019844783,15.9042019680025,17.9707129240474,9.42342739152837,15.2940186888064,17.7591826089196,14.0798002379035,97.695930749048,114.657309209271,186.850593700592,177.602835167005,63.8813708194708,88.9729040074611,153.794050167758,185.062049388729,70.4387565388361,33.5565212115473,47.1485392307374,41.3395372945231,135.575722790944,150.430055967847,186.157625312157,233.877828753695,196.784644289196,255.43405561299,117.24020809592,172.523190445561,41.3953869949444,42.5212535903799,37.6554460921433,69.5072256402699,63.3960203780565,112.39953974239,103.81956657707,114.627103936503,210.239124521199,225.948517393501,138.537093912113,135.142114135713,163.620944016584,220.231761998777,236.732324809938,226.262423486447,215.634080438867,250.767631114205,251.080244608358,252.381431097248,409.128417493031,366.257399921014,283.138070640195,249.292813079229,221.256142194632,124.418135646421,117.740490646372,100.582977579482,1080.69238948862,1665.92976758399,2647.78385817513,2191.69585605099,2017.9130994864,438.748368491593,156.284605804079,182.109989226611,236.384175347418,108.871963487374,174.524009283472,394.948121545301,341.312017513599,173.192832808971,162.657033635013,175.41698242013,598.78026524675,44.0194402200192,191.787243671754,114.326830338884,127.875500891099,232.691036731363,245.225736179117,193.903778066777,244.547186727548,121.619924125312,105.702129908455,14.153768831198,45.9417853850642,27.3843482890888,26.6681389224372,147.249491362316,86.663115915418,62.2056719235962,132.071297542842,31.511377745057,56.9907594443737,39.0105597114309,152.48687091411,130.845172406127,146.010357155148,172.259901310546,132.204891439781,164.152555202052,147.477308128592,86.2579411812179,96.290995252212,516.312595479997,98.6972304107563,68.963834770233,91.7309396689557,113.079017517759,77.763686003229,65.7232581801827,57.2668329673279,73.8369589530663,62.8649190895808,93.7720769257864,93.4184036029027,85.864148592007,100.391645451829,63.1167255742107,80.0979983000983,65.2329372413181,71.6523360546576,32.3018066164088,45.0358837450752,38.9303994171962,46.8104245930234,31.8955441574291,39.2535293985012,50.663373415235,32.8596267018164,37.7954426574077,28.1366073147993,33.2659017735528,31.2931117544014,29.78533283434,21.3417703302824,25.293468578307,19.0059983652932,20.4181607220677,20.5335820703369,153.932242348941,111.445695206765,442.100331632322,201.246881230957,52.6821978822028,42.9637842941811,59.1501647468408,62.1185255839895,61.821096188874,66.008292261058,154.696474063511,105.407331023367,61.8284613648663,62.6712886929625,69.797143188645,115.04888430774,134.654005071935,155.330193138406,85.1608875279337,65.5786462379843,81.1495696846179,57.6333257802239,65.3619881754899,77.7806242583633,99.2181267479597,123.844914154886,112.882085317948,120.065440495912,1103.39667801837,49.2193061862477,54.0537236561308,54.1917690847498,69.378161514868,89.9590805876515,97.7763270840652,145.286549412659,192.292378955192,245.183341976957,255.907407618691,312.226255093874,400.032296932867,653.168978371231,830.071832365888,894.932732129046,146.509279802118,64.9955542372763,64.8600606239263,42.6060165295722,52.805305864913,64.8249216299827,75.9359214426384,96.981422985326,53.4383138519987,69.3184478600666,81.8002963212909,69.1503188100414,72.3550074018103,90.8396087891893,67.8560777726725,65.8125877420639,29.5058563811422,55.4632860072512,87.178970363371,95.76194794583,116.229876272063,22.7223834483936,79.5080712928967,58.9562503887924,67.2121000926333,53.0510731454666,55.9224671946809,81.8091173979726,61.9360373562588,66.3420797458678,62.0601811376042,153.591589249624,114.403708677865,70.5139790522331,93.1713407502455,90.0736871430044,49.1157011857862,42.9721725994317,45.6508571016774,44.510798822392,38.0939441816197,57.7978078134584,63.056503533046,44.3511149962557,52.0486172441693,42.0328888054635,42.1674434299995,54.661837921539,128.345731369178,87.8698138872794,64.80870057516,90.6645658183635,122.187420979526,114.156043265325,122.58902034858,94.0796692764112,110.765046206071,131.97138014816,92.1808703869741,108.660040688435,57.1584070503506,59.9510473785869,42.6159268091197,36.9317024426388,109.888275409454,92.1563750992233,22.2132145037208,69.7587613715692,41.6687686581851,16.9531611304222,16.540001554244,16.4720284708696,53.3732270180706,47.0236879807491,46.0205912768731,103.104426745632,63.4253667130176,61.809118006562,53.6786543884352,58.9628994760802,53.0621029903212,74.8497122435755,99.1841468704031,74.8621994074325,127.152288799249,80.1527713882134,92.4456419442072,90.6070269026512,87.8584584327188,118.420773701525,136.263613769006,150.201995561302,122.403599907521,130.985611153014,100.350392615405,64.5029602605436,93.6097520338063,31.2851009421896,47.8431508084787,38.8247418083047,31.5707599836042,38.4907395685085,41.7230845040656,29.3276896828724,29.68559496209,26.5541763363628,26.1389346826649,24.3999368031154,27.7754960108294,25.8809854012486,22.5572421210428,36.503591762049,108.551131199918,75.0904979821312,124.73826995851,208.837951148798,116.175452304282,83.3339890416056,80.6025105337288,93.2924113505776,151.353493821374,164.796434669569,147.234146953925,208.114203818206,152.773401908853,140.503264914484,147.829927550765,162.565954363944,141.833574012056,149.114969784524,38.4013186061454,86.5883975280237,80.0740610986889,73.1751218375565,45.0668299650162,57.7268616533044,66.4517716126829,76.4390062356297,49.4215582771395,69.7444304468081,67.678973070694,71.4893833853229,88.5848660665088,83.0406226691155,91.4947020462919,96.687619330464,89.1150466515939,85.4587846654213,89.4226404743175,80.8122071537841,70.973935243781,76.6695482608338,76.53801697309,61.3361878188426,70.8643634527439,72.6839481789501,62.744294695361,80.4993316999799,66.6798198983181,79.1210603037411,79.9600022156934,81.8572248540932,78.1631292454107,100.089199406134,80.8278700010982,75.1929839593217,78.6010204376572,88.3120032138506,68.6725112127148,56.912586132835,42.6636817541576 | |phase1_expression=113.385383750194,220.552457628076,214.304641752471,276.452289134443,318.569684245877,66.983829492844,64.7107014449606,28.9236244509131,66.73385429989,49.8557441065846,17.4642327590015,16.59260907103,26.0225109495433,23.7783494579673,28.647439516147,23.28465574983,33.578970150151,15.7731082679119,18.373334103169,17.3999757237192,115.573831315304,27.1064296778417,34.2171723772005,136.633529065569,153.933627596071,207.297739045522,178.766228406016,123.034073863643,266.792880916749,210.193128219782,101.55257388013,4.44521471421742,9.84103660135312,31.6963362030877,51.4155883157269,70.6497242773593,53.2882019844783,15.9042019680025,17.9707129240474,9.42342739152837,15.2940186888064,17.7591826089196,14.0798002379035,97.695930749048,114.657309209271,186.850593700592,177.602835167005,63.8813708194708,88.9729040074611,153.794050167758,185.062049388729,70.4387565388361,33.5565212115473,47.1485392307374,41.3395372945231,135.575722790944,150.430055967847,186.157625312157,233.877828753695,196.784644289196,255.43405561299,117.24020809592,172.523190445561,41.3953869949444,42.5212535903799,37.6554460921433,69.5072256402699,63.3960203780565,112.39953974239,103.81956657707,114.627103936503,210.239124521199,225.948517393501,138.537093912113,135.142114135713,163.620944016584,220.231761998777,236.732324809938,226.262423486447,215.634080438867,250.767631114205,251.080244608358,252.381431097248,409.128417493031,366.257399921014,283.138070640195,249.292813079229,221.256142194632,124.418135646421,117.740490646372,100.582977579482,1080.69238948862,1665.92976758399,2647.78385817513,2191.69585605099,2017.9130994864,438.748368491593,156.284605804079,182.109989226611,236.384175347418,108.871963487374,174.524009283472,394.948121545301,341.312017513599,173.192832808971,162.657033635013,175.41698242013,598.78026524675,44.0194402200192,191.787243671754,114.326830338884,127.875500891099,232.691036731363,245.225736179117,193.903778066777,244.547186727548,121.619924125312,105.702129908455,14.153768831198,45.9417853850642,27.3843482890888,26.6681389224372,147.249491362316,86.663115915418,62.2056719235962,132.071297542842,31.511377745057,56.9907594443737,39.0105597114309,152.48687091411,130.845172406127,146.010357155148,172.259901310546,132.204891439781,164.152555202052,147.477308128592,86.2579411812179,96.290995252212,516.312595479997,98.6972304107563,68.963834770233,91.7309396689557,113.079017517759,77.763686003229,65.7232581801827,57.2668329673279,73.8369589530663,62.8649190895808,93.7720769257864,93.4184036029027,85.864148592007,100.391645451829,63.1167255742107,80.0979983000983,65.2329372413181,71.6523360546576,32.3018066164088,45.0358837450752,38.9303994171962,46.8104245930234,31.8955441574291,39.2535293985012,50.663373415235,32.8596267018164,37.7954426574077,28.1366073147993,33.2659017735528,31.2931117544014,29.78533283434,21.3417703302824,25.293468578307,19.0059983652932,20.4181607220677,20.5335820703369,153.932242348941,111.445695206765,442.100331632322,201.246881230957,52.6821978822028,42.9637842941811,59.1501647468408,62.1185255839895,61.821096188874,66.008292261058,154.696474063511,105.407331023367,61.8284613648663,62.6712886929625,69.797143188645,115.04888430774,134.654005071935,155.330193138406,85.1608875279337,65.5786462379843,81.1495696846179,57.6333257802239,65.3619881754899,77.7806242583633,99.2181267479597,123.844914154886,112.882085317948,120.065440495912,1103.39667801837,49.2193061862477,54.0537236561308,54.1917690847498,69.378161514868,89.9590805876515,97.7763270840652,145.286549412659,192.292378955192,245.183341976957,255.907407618691,312.226255093874,400.032296932867,653.168978371231,830.071832365888,894.932732129046,146.509279802118,64.9955542372763,64.8600606239263,42.6060165295722,52.805305864913,64.8249216299827,75.9359214426384,96.981422985326,53.4383138519987,69.3184478600666,81.8002963212909,69.1503188100414,72.3550074018103,90.8396087891893,67.8560777726725,65.8125877420639,29.5058563811422,55.4632860072512,87.178970363371,95.76194794583,116.229876272063,22.7223834483936,79.5080712928967,58.9562503887924,67.2121000926333,53.0510731454666,55.9224671946809,81.8091173979726,61.9360373562588,66.3420797458678,62.0601811376042,153.591589249624,114.403708677865,70.5139790522331,93.1713407502455,90.0736871430044,49.1157011857862,42.9721725994317,45.6508571016774,44.510798822392,38.0939441816197,57.7978078134584,63.056503533046,44.3511149962557,52.0486172441693,42.0328888054635,42.1674434299995,54.661837921539,128.345731369178,87.8698138872794,64.80870057516,90.6645658183635,122.187420979526,114.156043265325,122.58902034858,94.0796692764112,110.765046206071,131.97138014816,92.1808703869741,108.660040688435,57.1584070503506,59.9510473785869,42.6159268091197,36.9317024426388,109.888275409454,92.1563750992233,22.2132145037208,69.7587613715692,41.6687686581851,16.9531611304222,16.540001554244,16.4720284708696,53.3732270180706,47.0236879807491,46.0205912768731,103.104426745632,63.4253667130176,61.809118006562,53.6786543884352,58.9628994760802,53.0621029903212,74.8497122435755,99.1841468704031,74.8621994074325,127.152288799249,80.1527713882134,92.4456419442072,90.6070269026512,87.8584584327188,118.420773701525,136.263613769006,150.201995561302,122.403599907521,130.985611153014,100.350392615405,64.5029602605436,93.6097520338063,31.2851009421896,47.8431508084787,38.8247418083047,31.5707599836042,38.4907395685085,41.7230845040656,29.3276896828724,29.68559496209,26.5541763363628,26.1389346826649,24.3999368031154,27.7754960108294,25.8809854012486,22.5572421210428,36.503591762049,108.551131199918,75.0904979821312,124.73826995851,208.837951148798,116.175452304282,83.3339890416056,80.6025105337288,93.2924113505776,151.353493821374,164.796434669569,147.234146953925,208.114203818206,152.773401908853,140.503264914484,147.829927550765,162.565954363944,141.833574012056,149.114969784524,38.4013186061454,86.5883975280237,80.0740610986889,73.1751218375565,45.0668299650162,57.7268616533044,66.4517716126829,76.4390062356297,49.4215582771395,69.7444304468081,67.678973070694,71.4893833853229,88.5848660665088,83.0406226691155,91.4947020462919,96.687619330464,89.1150466515939,85.4587846654213,89.4226404743175,80.8122071537841,70.973935243781,76.6695482608338,76.53801697309,61.3361878188426,70.8643634527439,72.6839481789501,62.744294695361,80.4993316999799,66.6798198983181,79.1210603037411,79.9600022156934,81.8572248540932,78.1631292454107,100.089199406134,80.8278700010982,75.1929839593217,78.6010204376572,88.3120032138506,68.6725112127148,56.912586132835,42.6636817541576 | ||
|short_description=p1@Pgrmc1 | |short_description=p1@Pgrmc1 | ||
}} | }} |
Latest revision as of 19:57, 1 October 2015
Short description: | p1@Pgrmc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pgrmc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000073339, ENSMUST00000166283_5end |
EntrezGene: | Pgrmc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.39e-13 | 70 |
CNS neuron (sensu Vertebrata) | 1.56e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.56e-10 | 23 |
electrically responsive cell | 7.56e-08 | 39 |
electrically active cell | 7.56e-08 | 39 |
ectodermal cell | 9.20e-07 | 44 |
neurectodermal cell | 9.20e-07 | 44 |