FFCP PHASE1:Mm9::chrX:22862658..22862704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67455 | |EntrezGene=67455 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1509 | |||
|TSSclassifier=NA | |||
|UniProt=Q80TF4 | |UniProt=Q80TF4 | ||
|association_with_transcript=0bp_to_ENSMUST00000115319_5end | |association_with_transcript=0bp_to_ENSMUST00000115319_5end | ||
|cluster_id=chrX:22862658..22862704,- | |||
|description=CAGE_peak_6_at_Klhl13_5end | |description=CAGE_peak_6_at_Klhl13_5end | ||
|id=chrX:22862658..22862704,- | |id=chrX:22862658..22862704,- | ||
|ontology_enrichment_celltype=CL:0000540!9.89e-17!33;CL:0000047!9.89e-17!33;CL:0000031!9.89e-17!33;CL:0000404!9.89e-17!33;CL:0000117!9.40e-14!23;CL:0000337!9.40e-14!23;CL:0000221!7.37e-13!44;CL:0000133!7.37e-13!44;CL:0002319!2.82e-12!43;CL:0000393!7.36e-12!39;CL:0000211!7.36e-12!39;CL:0000055!1.56e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.56e-16,33;CL:0000047,1.56e-16,33;CL:0000031,1.56e-16,33;CL:0000404,1.56e-16,33;CL:0000117,2.72e-15,23;CL:0000337,2.72e-15,23;CL:0000393,1.51e-12,39;CL:0000211,1.51e-12,39;CL:0000221,3.10e-11,44;CL:0000133,3.10e-11,44;CL:0002319,1.50e-10,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.39e-23!102;UBERON:0000924!2.39e-23!102;UBERON:0006601!2.39e-23!102;UBERON:0001017!1.78e-22!73;UBERON:0005743!1.78e-22!73;UBERON:0000073!2.75e-22!75;UBERON:0001016!2.75e-22!75;UBERON:0002346!7.92e-21!71;UBERON:0003075!7.92e-21!71;UBERON:0007284!7.92e-21!71;UBERON:0000033!1.63e-17!63;UBERON:0001049!3.15e-15!52;UBERON:0005068!3.15e-15!52;UBERON:0006241!3.15e-15!52;UBERON:0007135!3.15e-15!52;UBERON:0003056!2.05e-14!49;UBERON:0000955!8.02e-14!50;UBERON:0006238!8.02e-14!50;UBERON:0002616!1.54e-13!49;UBERON:0003080!3.17e-11!40;UBERON:0002780!1.53e-10!39;UBERON:0001890!1.53e-10!39;UBERON:0006240!1.53e-10!39;UBERON:0002020!2.69e-10!34;UBERON:0007811!1.63e-09!86;UBERON:0000153!5.82e-09!94;UBERON:0002791!1.37e-07!29;UBERON:0003528!1.37e-07!29;UBERON:0001893!1.37e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.11e-18,73;UBERON:0001016,2.49e-17,75;UBERON:0002346,3.37e-17,64;UBERON:0003075,3.37e-17,64;UBERON:0007284,3.37e-17,64;UBERON:0004121,1.76e-16,95;UBERON:0000924,1.76e-16,95;UBERON:0006601,1.76e-16,95;UBERON:0010314,3.68e-15,92;UBERON:0010371,3.74e-15,73;UBERON:0000073,2.23e-14,54;UBERON:0001049,6.98e-13,52;UBERON:0005068,6.98e-13,52;UBERON:0006241,6.98e-13,52;UBERON:0007135,6.98e-13,52;UBERON:0003056,2.99e-10,49;UBERON:0002020,3.02e-10,34;UBERON:0000955,3.45e-09,47;UBERON:0006238,3.45e-09,47;UBERON:0002616,7.38e-09,46;UBERON:0002420,1.81e-08,8;UBERON:0007245,1.81e-08,8;UBERON:0010009,1.81e-08,8;UBERON:0010011,1.81e-08,8;UBERON:0000454,1.81e-08,8;UBERON:0003080,2.54e-08,40;UBERON:0002780,1.38e-07,39;UBERON:0001890,1.38e-07,39;UBERON:0006240,1.38e-07,39;UBERON:0003528,6.25e-07,29;UBERON:0002791,6.25e-07,29;UBERON:0001893,6.25e-07,29 | |||
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| ||
|short_description=p6@Klhl13 | |short_description=p6@Klhl13 | ||
}} | }} |
Latest revision as of 19:48, 1 October 2015
Short description: | p6@Klhl13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Klhl13_5end |
Coexpression cluster: | MCL_coexpression_mm9:1509 |
Association with transcript: | 0bp_to_ENSMUST00000115319_5end |
EntrezGene: | Klhl13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.56e-16 | 33 |
neuronal stem cell | 1.56e-16 | 33 |
neuroblast | 1.56e-16 | 33 |
electrically signaling cell | 1.56e-16 | 33 |
CNS neuron (sensu Vertebrata) | 2.72e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.72e-15 | 23 |
electrically responsive cell | 1.51e-12 | 39 |
electrically active cell | 1.51e-12 | 39 |
ectodermal cell | 3.10e-11 | 44 |
neurectodermal cell | 3.10e-11 | 44 |
neural cell | 1.50e-10 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.11e-18 | 73 |
nervous system | 2.49e-17 | 75 |
neurectoderm | 3.37e-17 | 64 |
neural plate | 3.37e-17 | 64 |
presumptive neural plate | 3.37e-17 | 64 |
ectoderm-derived structure | 1.76e-16 | 95 |
ectoderm | 1.76e-16 | 95 |
presumptive ectoderm | 1.76e-16 | 95 |
structure with developmental contribution from neural crest | 3.68e-15 | 92 |
ecto-epithelium | 3.74e-15 | 73 |
regional part of nervous system | 2.23e-14 | 54 |
neural tube | 6.98e-13 | 52 |
neural rod | 6.98e-13 | 52 |
future spinal cord | 6.98e-13 | 52 |
neural keel | 6.98e-13 | 52 |
pre-chordal neural plate | 2.99e-10 | 49 |
gray matter | 3.02e-10 | 34 |
brain | 3.45e-09 | 47 |
future brain | 3.45e-09 | 47 |
regional part of brain | 7.38e-09 | 46 |
basal ganglion | 1.81e-08 | 8 |
nuclear complex of neuraxis | 1.81e-08 | 8 |
aggregate regional part of brain | 1.81e-08 | 8 |
collection of basal ganglia | 1.81e-08 | 8 |
cerebral subcortex | 1.81e-08 | 8 |
anterior neural tube | 2.54e-08 | 40 |
regional part of forebrain | 1.38e-07 | 39 |
forebrain | 1.38e-07 | 39 |
future forebrain | 1.38e-07 | 39 |
brain grey matter | 6.25e-07 | 29 |
regional part of telencephalon | 6.25e-07 | 29 |
telencephalon | 6.25e-07 | 29 |