FFCP PHASE1:Mm9::chr11:59653305..59653320,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26572 | |EntrezGene=26572 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1081 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000133652_5end | |association_with_transcript=0bp_to_ENSMUST00000133652_5end | ||
|cluster_id=chr11:59653305..59653320,- | |||
|description=CAGE_peak_2_at_Cops3_5end | |description=CAGE_peak_2_at_Cops3_5end | ||
|id=chr11:59653305..59653320,- | |id=chr11:59653305..59653320,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.26e-08!23;UBERON:0001009!7.26e-08!23;UBERON:0007100!5.36e-07!18;UBERON:0000948!5.36e-07!18;UBERON:0005498!5.36e-07!18;UBERON:0004140!5.36e-07!18;UBERON:0009881!5.36e-07!18;UBERON:0004141!5.36e-07!18;UBERON:0003084!5.36e-07!18;UBERON:0007005!5.36e-07!18;UBERON:0004139!5.36e-07!18;UBERON:0004291!5.36e-07!18 | |ontology_enrichment_uberon=UBERON:0004535!7.26e-08!23;UBERON:0001009!7.26e-08!23;UBERON:0007100!5.36e-07!18;UBERON:0000948!5.36e-07!18;UBERON:0005498!5.36e-07!18;UBERON:0004140!5.36e-07!18;UBERON:0009881!5.36e-07!18;UBERON:0004141!5.36e-07!18;UBERON:0003084!5.36e-07!18;UBERON:0007005!5.36e-07!18;UBERON:0004139!5.36e-07!18;UBERON:0004291!5.36e-07!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,7.26e-08,23;UBERON:0001009,7.26e-08,23;UBERON:0007100,5.36e-07,18;UBERON:0000948,5.36e-07,18;UBERON:0005498,5.36e-07,18;UBERON:0004140,5.36e-07,18;UBERON:0009881,5.36e-07,18;UBERON:0004141,5.36e-07,18;UBERON:0003084,5.36e-07,18;UBERON:0007005,5.36e-07,18;UBERON:0004139,5.36e-07,18;UBERON:0004291,5.36e-07,18 | |||
|phase1_expression=29.1470901730725,16.40184415905,17.2899710968024,11.4936400296595,13.5241847085514,18.1309613664841,16.8201101228778,15.3656754895476,9.15126693985834,8.19225842126977,9.41698825240277,10.1310641924077,16.0928686135333,15.2985704233245,11.3257319017325,17.6153482629149,14.6907994406911,14.0380663584416,13.5743289269681,16.9755860719212,40.8207792725135,21.1489726057886,25.0751797573378,21.4389846543165,23.1703373877842,19.5238867799107,18.9535278309993,24.7791917588772,25.4631382071541,31.5037662199913,21.5078595335646,22.2260735710871,15.9916844771988,0,22.8192779603507,26.0988393212833,25.1128308202714,32.2269355667419,28.9094077473806,29.8408534065065,21.7645650571475,22.5405010036287,28.1596004758069,40.5387753881359,37.6108414824399,33.0384153891027,4.69434806608824,10.4652075062614,12.3024262331304,20.4151394027998,13.5786828976602,10.062679505548,9.2280433331755,2.17608642603403,9.41062637598899,22.6388303711633,15.1862723167541,21.1425557833751,19.624696703381,16.9277113367051,13.9442908771359,11.1818695582814,6.22506357277798,6.29929802096979,6.92206453796882,7.8152812644071,3.29560121570245,5.37905627450176,22.3969562586312,23.4910332697142,24.8183454394631,17.1390590642282,13.2521124570968,24.6206506422058,23.9613677545591,17.4651569455904,25.3266526298594,25.7928422932079,28.2636021191488,21.101806036831,25.1591019906627,21.3574481928272,24.0097379141188,29.826418331679,21.8501494320838,19.7401152267357,20.786265396669,27.4007185363192,18.4014649799637,17.0036010240267,11.5945795480671,13.7667820317022,13.599426674155,19.4293148989614,11.695975514058,22.8493712419641,43.1164369804478,22.8376632254597,21.822024386641,15.546941278455,24.6475984609191,10.2661181931454,7.64415719119937,0,21.8655951421326,21.7889484308585,25.7817466957539,25.5771890570694,14.2415836005944,23.4538579722423,25.502343034622,34.1001335709598,28.3657061624952,30.2952507510771,24.9288059127694,28.9033160058254,35.3488803860155,34.2700475900191,19.4614321428972,37.2063754879041,31.1386541029155,26.6681389224372,41.0061874679869,32.2058876712702,26.5997317653088,21.9693067479389,20.8478316640301,23.3962065087429,20.9665874670557,35.0510096207285,34.7700458142156,27.3926487606044,30.0716073932638,25.3158302757027,32.8305110404105,31.474805035145,24.6451260517765,22.3932547098167,28.3049489445716,33.2498132300629,29.407220109571,31.2666862029523,33.491556143795,29.086029842293,24.7652856910833,29.0818145046609,23.9876414872906,33.372734825333,23.7124792226126,20.8016688184601,20.586281527182,27.1802708210193,25.580346928755,23.6811473235073,31.2788847340074,23.0879749509452,25.9818879305897,23.1613116403244,19.3231179589003,33.9686266958223,34.24080475724,37.9930949682741,35.0382208666111,34.0402120923009,33.7844977223358,43.9489155578271,38.0948229987459,39.2331550353689,35.2158078814848,37.7585167381919,40.7776112015654,42.8365963156224,45.4468738652475,53.0115354103468,30.9126224389267,29.9452422023718,26.7639214216876,24.3294521330461,26.447743066369,31.1197140292988,24.4848176511977,26.6222252502812,29.7986578752126,27.7729414124336,22.302865892592,28.3282202125299,26.138861715228,24.8695590051439,23.7856186285327,17.9763881730844,22.0460810872188,24.4943766102872,33.9505542706016,29.0191222028711,16.9061603509621,31.9732584717143,25.6017283061266,21.7421041659988,22.5754437533599,22.2891323449199,28.5737684671302,22.3348866698459,30.8310732170635,28.6973581831682,26.7320233353956,29.9066609471855,21.7060329885698,27.0118418922707,25.2079593263606,25.892652370573,19.1319567594542,34.3201766485102,23.0029130443767,21.2120340171047,27.7713529071959,28.0362554521294,29.0623809905498,29.4290548031654,21.4313700593261,25.5813405890154,22.1632367961155,26.9894686382549,26.2853078083122,22.6133447546451,27.8511059836636,20.0987657293533,23.0147310395039,19.0459633097946,22.0047580747332,20.4829143394672,22.4490476425664,18.0811323226889,19.6028669121054,14.1415477792864,27.538799289066,19.3155722413313,40.137647496948,37.3905280229128,33.2787939114651,81.0431676326037,22.4010835785542,22.645447169205,21.5423397732799,14.8160654730582,13.3679204449436,12.4553673547086,19.4309136803949,21.9191893433484,16.2067988958075,30.5255250600717,21.149072696032,19.4091507997308,25.2474786998043,21.1161757404845,31.8588332015911,26.9486506132029,29.6277085825456,26.4047111658257,22.4429438589387,26.4394227231778,21.4495483329624,25.0838273339479,28.163292892393,24.3348303610578,26.3546521437497,29.9093075419742,30.2991249120871,25.568675352446,24.9662259700716,25.7204442037911,29.4384787846174,28.5390108163313,23.8596079873075,26.4884505729701,23.467170806371,29.6564899209348,26.0223509704855,22.4245304000413,29.8709189387425,25.8742447941789,21.2482772325583,20.3534715683876,23.9014286036478,36.8996351000914,17.5997007221788,18.9875918526165,27.7791791054568,20.9088987275207,19.9573572472697,20.3612574153805,16.487907709404,16.9341257311626,15.6165970398999,27.6854479224383,24.3578715057474,25.2116139237292,25.0572390706579,29.6905380340546,25.3300573945566,24.0058536564981,20.9939777542353,23.0345228945946,25.663764711775,27.9602690889117,171.926346298678,32.7441235836314,31.7680301677627,39.4735912338417,42.6227417476513,38.3530404864066,28.165737274981,18.7494314175288,26.7391328285563,82.3801852016681,109.739432384247,24.9648785296261,24.9352014806902,24.6506297195585,27.4132936483147,19.8719632190904,18.2786846398764,21.2745945650345,23.3349452935832,23.222283488074,21.49031947671,21.0726726935997,19.7839497901697,16.933284128698,17.9990429359616,53.2816401495747,26.8603003582618,30.4129973906123,24.8469232218836,22.6031825017663,27.7770063667749,19.4140721723301,19.0787857380369,18.0565957452731,24.8490810751509,24.8575627713876,21.1971339972577,25.6061241692095,16.4419804744954,21.1510291269116,14.8504950050997,18.9134905354173,24.0165476761628,22.7814537170801,34.3536120503625,33.9171142390876,28.5125121609404,24.0675649897611,25.5728058406138,28.3119003013022,28.6698278864084,30.2871534141174,32.0919209591815,28.3020877175453,33.2057882856214,26.4076877940507,25.9386975691574,29.1314443442155,26.7649285333158,30.0065025508336,23.8721711446402,26.6214724239913,27.1976694530182,34.444547311449,33.9440559861561,29.46098382245,26.7048532740999,29.5053225763627,28.3269235050145,27.2459037411198,29.6343316053892,27.8853894124113,25.9385857445596,25.812544496256,29.6587545310435,23.5425712877597,27.0092488491995,31.1423050783792,23.9204197616615,24.9810577937946,30.8789723147939,27.0737528100856,35.388341432736,37.9417240885567,44.9823601103618 | |phase1_expression=29.1470901730725,16.40184415905,17.2899710968024,11.4936400296595,13.5241847085514,18.1309613664841,16.8201101228778,15.3656754895476,9.15126693985834,8.19225842126977,9.41698825240277,10.1310641924077,16.0928686135333,15.2985704233245,11.3257319017325,17.6153482629149,14.6907994406911,14.0380663584416,13.5743289269681,16.9755860719212,40.8207792725135,21.1489726057886,25.0751797573378,21.4389846543165,23.1703373877842,19.5238867799107,18.9535278309993,24.7791917588772,25.4631382071541,31.5037662199913,21.5078595335646,22.2260735710871,15.9916844771988,0,22.8192779603507,26.0988393212833,25.1128308202714,32.2269355667419,28.9094077473806,29.8408534065065,21.7645650571475,22.5405010036287,28.1596004758069,40.5387753881359,37.6108414824399,33.0384153891027,4.69434806608824,10.4652075062614,12.3024262331304,20.4151394027998,13.5786828976602,10.062679505548,9.2280433331755,2.17608642603403,9.41062637598899,22.6388303711633,15.1862723167541,21.1425557833751,19.624696703381,16.9277113367051,13.9442908771359,11.1818695582814,6.22506357277798,6.29929802096979,6.92206453796882,7.8152812644071,3.29560121570245,5.37905627450176,22.3969562586312,23.4910332697142,24.8183454394631,17.1390590642282,13.2521124570968,24.6206506422058,23.9613677545591,17.4651569455904,25.3266526298594,25.7928422932079,28.2636021191488,21.101806036831,25.1591019906627,21.3574481928272,24.0097379141188,29.826418331679,21.8501494320838,19.7401152267357,20.786265396669,27.4007185363192,18.4014649799637,17.0036010240267,11.5945795480671,13.7667820317022,13.599426674155,19.4293148989614,11.695975514058,22.8493712419641,43.1164369804478,22.8376632254597,21.822024386641,15.546941278455,24.6475984609191,10.2661181931454,7.64415719119937,0,21.8655951421326,21.7889484308585,25.7817466957539,25.5771890570694,14.2415836005944,23.4538579722423,25.502343034622,34.1001335709598,28.3657061624952,30.2952507510771,24.9288059127694,28.9033160058254,35.3488803860155,34.2700475900191,19.4614321428972,37.2063754879041,31.1386541029155,26.6681389224372,41.0061874679869,32.2058876712702,26.5997317653088,21.9693067479389,20.8478316640301,23.3962065087429,20.9665874670557,35.0510096207285,34.7700458142156,27.3926487606044,30.0716073932638,25.3158302757027,32.8305110404105,31.474805035145,24.6451260517765,22.3932547098167,28.3049489445716,33.2498132300629,29.407220109571,31.2666862029523,33.491556143795,29.086029842293,24.7652856910833,29.0818145046609,23.9876414872906,33.372734825333,23.7124792226126,20.8016688184601,20.586281527182,27.1802708210193,25.580346928755,23.6811473235073,31.2788847340074,23.0879749509452,25.9818879305897,23.1613116403244,19.3231179589003,33.9686266958223,34.24080475724,37.9930949682741,35.0382208666111,34.0402120923009,33.7844977223358,43.9489155578271,38.0948229987459,39.2331550353689,35.2158078814848,37.7585167381919,40.7776112015654,42.8365963156224,45.4468738652475,53.0115354103468,30.9126224389267,29.9452422023718,26.7639214216876,24.3294521330461,26.447743066369,31.1197140292988,24.4848176511977,26.6222252502812,29.7986578752126,27.7729414124336,22.302865892592,28.3282202125299,26.138861715228,24.8695590051439,23.7856186285327,17.9763881730844,22.0460810872188,24.4943766102872,33.9505542706016,29.0191222028711,16.9061603509621,31.9732584717143,25.6017283061266,21.7421041659988,22.5754437533599,22.2891323449199,28.5737684671302,22.3348866698459,30.8310732170635,28.6973581831682,26.7320233353956,29.9066609471855,21.7060329885698,27.0118418922707,25.2079593263606,25.892652370573,19.1319567594542,34.3201766485102,23.0029130443767,21.2120340171047,27.7713529071959,28.0362554521294,29.0623809905498,29.4290548031654,21.4313700593261,25.5813405890154,22.1632367961155,26.9894686382549,26.2853078083122,22.6133447546451,27.8511059836636,20.0987657293533,23.0147310395039,19.0459633097946,22.0047580747332,20.4829143394672,22.4490476425664,18.0811323226889,19.6028669121054,14.1415477792864,27.538799289066,19.3155722413313,40.137647496948,37.3905280229128,33.2787939114651,81.0431676326037,22.4010835785542,22.645447169205,21.5423397732799,14.8160654730582,13.3679204449436,12.4553673547086,19.4309136803949,21.9191893433484,16.2067988958075,30.5255250600717,21.149072696032,19.4091507997308,25.2474786998043,21.1161757404845,31.8588332015911,26.9486506132029,29.6277085825456,26.4047111658257,22.4429438589387,26.4394227231778,21.4495483329624,25.0838273339479,28.163292892393,24.3348303610578,26.3546521437497,29.9093075419742,30.2991249120871,25.568675352446,24.9662259700716,25.7204442037911,29.4384787846174,28.5390108163313,23.8596079873075,26.4884505729701,23.467170806371,29.6564899209348,26.0223509704855,22.4245304000413,29.8709189387425,25.8742447941789,21.2482772325583,20.3534715683876,23.9014286036478,36.8996351000914,17.5997007221788,18.9875918526165,27.7791791054568,20.9088987275207,19.9573572472697,20.3612574153805,16.487907709404,16.9341257311626,15.6165970398999,27.6854479224383,24.3578715057474,25.2116139237292,25.0572390706579,29.6905380340546,25.3300573945566,24.0058536564981,20.9939777542353,23.0345228945946,25.663764711775,27.9602690889117,171.926346298678,32.7441235836314,31.7680301677627,39.4735912338417,42.6227417476513,38.3530404864066,28.165737274981,18.7494314175288,26.7391328285563,82.3801852016681,109.739432384247,24.9648785296261,24.9352014806902,24.6506297195585,27.4132936483147,19.8719632190904,18.2786846398764,21.2745945650345,23.3349452935832,23.222283488074,21.49031947671,21.0726726935997,19.7839497901697,16.933284128698,17.9990429359616,53.2816401495747,26.8603003582618,30.4129973906123,24.8469232218836,22.6031825017663,27.7770063667749,19.4140721723301,19.0787857380369,18.0565957452731,24.8490810751509,24.8575627713876,21.1971339972577,25.6061241692095,16.4419804744954,21.1510291269116,14.8504950050997,18.9134905354173,24.0165476761628,22.7814537170801,34.3536120503625,33.9171142390876,28.5125121609404,24.0675649897611,25.5728058406138,28.3119003013022,28.6698278864084,30.2871534141174,32.0919209591815,28.3020877175453,33.2057882856214,26.4076877940507,25.9386975691574,29.1314443442155,26.7649285333158,30.0065025508336,23.8721711446402,26.6214724239913,27.1976694530182,34.444547311449,33.9440559861561,29.46098382245,26.7048532740999,29.5053225763627,28.3269235050145,27.2459037411198,29.6343316053892,27.8853894124113,25.9385857445596,25.812544496256,29.6587545310435,23.5425712877597,27.0092488491995,31.1423050783792,23.9204197616615,24.9810577937946,30.8789723147939,27.0737528100856,35.388341432736,37.9417240885567,44.9823601103618 | ||
|short_description=p2@Cops3 | |short_description=p2@Cops3 | ||
}} | }} |
Latest revision as of 19:40, 1 October 2015
Short description: | p2@Cops3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cops3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1081 |
Association with transcript: | 0bp_to_ENSMUST00000133652_5end |
EntrezGene: | Cops3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 7.26e-08 | 23 |
circulatory system | 7.26e-08 | 23 |
primary circulatory organ | 5.36e-07 | 18 |
heart | 5.36e-07 | 18 |
primitive heart tube | 5.36e-07 | 18 |
primary heart field | 5.36e-07 | 18 |
anterior lateral plate mesoderm | 5.36e-07 | 18 |
heart tube | 5.36e-07 | 18 |
heart primordium | 5.36e-07 | 18 |
cardiac mesoderm | 5.36e-07 | 18 |
cardiogenic plate | 5.36e-07 | 18 |
heart rudiment | 5.36e-07 | 18 |