FFCP PHASE1:Mm9::chr5:122286819..122286854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16923 | |EntrezGene=16923 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2223 | |||
|TSSclassifier=NA | |||
|UniProt=O09039,D3Z3Y5,D6RCY9 | |UniProt=O09039,D3Z3Y5,D6RCY9 | ||
|association_with_transcript=0bp_to_ENSMUST00000040308,ENSMUST00000118580,ENSMUST00000136960,ENSMUST00000167396_5end | |association_with_transcript=0bp_to_ENSMUST00000040308,ENSMUST00000118580,ENSMUST00000136960,ENSMUST00000167396_5end | ||
|cluster_id=chr5:122286819..122286854,- | |||
|description=CAGE_peak_1_at_Sh2b3_5end | |description=CAGE_peak_1_at_Sh2b3_5end | ||
|id=chr5:122286819..122286854,- | |id=chr5:122286819..122286854,- | ||
|ontology_enrichment_celltype=CL:0002320!9.88e-13!46;CL:0000134!9.88e-13!46;CL:0000988!2.69e-12!32;CL:0002032!2.69e-12!32;CL:0000037!2.69e-12!32;CL:0000566!2.69e-12!32;CL:0000837!2.69e-12!32;CL:0002031!4.73e-11!25;CL:0000049!2.99e-09!19;CL:0000219!3.46e-08!54;CL:0000063!3.77e-08!66;CL:0000763!9.68e-08!16;CL:0000839!2.08e-07!13 | |ontology_enrichment_celltype=CL:0002320!9.88e-13!46;CL:0000134!9.88e-13!46;CL:0000988!2.69e-12!32;CL:0002032!2.69e-12!32;CL:0000037!2.69e-12!32;CL:0000566!2.69e-12!32;CL:0000837!2.69e-12!32;CL:0002031!4.73e-11!25;CL:0000049!2.99e-09!19;CL:0000219!3.46e-08!54;CL:0000063!3.77e-08!66;CL:0000763!9.68e-08!16;CL:0000839!2.08e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,9.88e-13,46;CL:0000134,9.88e-13,46;CL:0000988,2.69e-12,32;CL:0002032,2.69e-12,32;CL:0000037,2.69e-12,32;CL:0000837,2.69e-12,32;CL:0002031,4.73e-11,25;CL:0000049,2.99e-09,19;CL:0000219,3.46e-08,54;CL:0000763,9.68e-08,16;CL:0000839,2.08e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.88e-13!46;UBERON:0002204!3.57e-09!32;UBERON:0002371!3.20e-08!16;UBERON:0000926!2.41e-07!193;UBERON:0004120!2.41e-07!193;UBERON:0006603!2.41e-07!193;UBERON:0001474!3.72e-07!22;UBERON:0004765!3.72e-07!22;UBERON:0001434!3.72e-07!22;UBERON:0003081!8.15e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.88e-13,46;UBERON:0002204,3.57e-09,32;UBERON:0002371,3.20e-08,16;UBERON:0001474,3.72e-07,22;UBERON:0004765,3.72e-07,22;UBERON:0001434,3.72e-07,22 | |||
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| ||
|short_description=p1@Sh2b3 | |short_description=p1@Sh2b3 | ||
}} | }} |
Latest revision as of 19:38, 1 October 2015
Short description: | p1@Sh2b3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sh2b3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2223 |
Association with transcript: | 0bp_to_ENSMUST00000040308, ENSMUST00000118580, ENSMUST00000136960, ENSMUST00000167396_5end |
EntrezGene: | Sh2b3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 9.88e-13 | 46 |
mesenchymal cell | 9.88e-13 | 46 |
hematopoietic cell | 2.69e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.69e-12 | 32 |
hematopoietic stem cell | 2.69e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.69e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 4.73e-11 | 25 |
common myeloid progenitor | 2.99e-09 | 19 |
motile cell | 3.46e-08 | 54 |
myeloid cell | 9.68e-08 | 16 |
myeloid lineage restricted progenitor cell | 2.08e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.88e-13 | 46 |
musculoskeletal system | 3.57e-09 | 32 |
bone marrow | 3.20e-08 | 16 |
bone element | 3.72e-07 | 22 |
skeletal element | 3.72e-07 | 22 |
skeletal system | 3.72e-07 | 22 |