FFCP PHASE1:Mm9::chrX:20498037..20498053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20964 | |EntrezGene=20964 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=O88935,A2AE14 | |UniProt=O88935,A2AE14 | ||
|association_with_transcript=0bp_to_ENSMUST00000041344,ENSMUST00000081893,NM_001110780,NM_013680,uc009stw.2,uc009stx.2_5end | |association_with_transcript=0bp_to_ENSMUST00000041344,ENSMUST00000081893,NM_001110780,NM_013680,uc009stw.2,uc009stx.2_5end | ||
|cluster_id=chrX:20498037..20498053,- | |||
|description=CAGE_peak_1_at_Syn1_5end | |description=CAGE_peak_1_at_Syn1_5end | ||
|id=chrX:20498037..20498053,- | |id=chrX:20498037..20498053,- | ||
|ontology_enrichment_celltype=CL:0000540!6.03e-15!33;CL:0000047!6.03e-15!33;CL:0000031!6.03e-15!33;CL:0000404!6.03e-15!33;CL:0000221!7.41e-15!44;CL:0000133!7.41e-15!44;CL:0002319!8.90e-15!43;CL:0000117!5.12e-13!23;CL:0000337!5.12e-13!23;CL:0000055!9.88e-12!50;CL:0000393!1.50e-11!39;CL:0000211!1.50e-11!39 | |ontology_enrichment_celltype=CL:0000540!6.03e-15!33;CL:0000047!6.03e-15!33;CL:0000031!6.03e-15!33;CL:0000404!6.03e-15!33;CL:0000221!7.41e-15!44;CL:0000133!7.41e-15!44;CL:0002319!8.90e-15!43;CL:0000117!5.12e-13!23;CL:0000337!5.12e-13!23;CL:0000055!9.88e-12!50;CL:0000393!1.50e-11!39;CL:0000211!1.50e-11!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.84e-16,33;CL:0000047,1.84e-16,33;CL:0000031,1.84e-16,33;CL:0000404,1.84e-16,33;CL:0000221,2.31e-16,44;CL:0000133,2.31e-16,44;CL:0002319,2.84e-16,43;CL:0000117,2.58e-14,23;CL:0000337,2.58e-14,23;CL:0000393,7.35e-12,39;CL:0000211,7.35e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.17e-33!75;UBERON:0001016!3.17e-33!75;UBERON:0001017!3.50e-33!73;UBERON:0005743!3.50e-33!73;UBERON:0004121!1.33e-30!102;UBERON:0000924!1.33e-30!102;UBERON:0006601!1.33e-30!102;UBERON:0002346!2.28e-29!71;UBERON:0003075!2.28e-29!71;UBERON:0007284!2.28e-29!71;UBERON:0001049!1.21e-25!52;UBERON:0005068!1.21e-25!52;UBERON:0006241!1.21e-25!52;UBERON:0007135!1.21e-25!52;UBERON:0000033!1.75e-25!63;UBERON:0000955!1.04e-24!50;UBERON:0006238!1.04e-24!50;UBERON:0002616!5.20e-24!49;UBERON:0003056!1.78e-21!49;UBERON:0003080!8.71e-20!40;UBERON:0002020!3.70e-19!34;UBERON:0002780!3.89e-19!39;UBERON:0001890!3.89e-19!39;UBERON:0006240!3.89e-19!39;UBERON:0002791!2.79e-16!29;UBERON:0003528!2.79e-16!29;UBERON:0001893!2.79e-16!29;UBERON:0000956!5.35e-12!21;UBERON:0001869!5.35e-12!21;UBERON:0000203!5.35e-12!21;UBERON:0007811!4.88e-11!86;UBERON:0002619!4.27e-10!17;UBERON:0000153!1.84e-08!94;UBERON:0002021!3.22e-08!10;UBERON:0000411!3.22e-08!10;UBERON:0001950!3.22e-08!10 | |ontology_enrichment_uberon=UBERON:0000073!3.17e-33!75;UBERON:0001016!3.17e-33!75;UBERON:0001017!3.50e-33!73;UBERON:0005743!3.50e-33!73;UBERON:0004121!1.33e-30!102;UBERON:0000924!1.33e-30!102;UBERON:0006601!1.33e-30!102;UBERON:0002346!2.28e-29!71;UBERON:0003075!2.28e-29!71;UBERON:0007284!2.28e-29!71;UBERON:0001049!1.21e-25!52;UBERON:0005068!1.21e-25!52;UBERON:0006241!1.21e-25!52;UBERON:0007135!1.21e-25!52;UBERON:0000033!1.75e-25!63;UBERON:0000955!1.04e-24!50;UBERON:0006238!1.04e-24!50;UBERON:0002616!5.20e-24!49;UBERON:0003056!1.78e-21!49;UBERON:0003080!8.71e-20!40;UBERON:0002020!3.70e-19!34;UBERON:0002780!3.89e-19!39;UBERON:0001890!3.89e-19!39;UBERON:0006240!3.89e-19!39;UBERON:0002791!2.79e-16!29;UBERON:0003528!2.79e-16!29;UBERON:0001893!2.79e-16!29;UBERON:0000956!5.35e-12!21;UBERON:0001869!5.35e-12!21;UBERON:0000203!5.35e-12!21;UBERON:0007811!4.88e-11!86;UBERON:0002619!4.27e-10!17;UBERON:0000153!1.84e-08!94;UBERON:0002021!3.22e-08!10;UBERON:0000411!3.22e-08!10;UBERON:0001950!3.22e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.87e-37,75;UBERON:0001017,8.78e-37,73;UBERON:0002346,1.24e-31,64;UBERON:0003075,1.24e-31,64;UBERON:0007284,1.24e-31,64;UBERON:0004121,5.74e-31,95;UBERON:0000924,5.74e-31,95;UBERON:0006601,5.74e-31,95;UBERON:0000073,4.80e-30,54;UBERON:0001049,2.21e-28,52;UBERON:0005068,2.21e-28,52;UBERON:0006241,2.21e-28,52;UBERON:0007135,2.21e-28,52;UBERON:0010371,1.81e-25,73;UBERON:0000955,5.26e-25,47;UBERON:0006238,5.26e-25,47;UBERON:0002616,3.05e-24,46;UBERON:0003056,9.77e-24,49;UBERON:0003080,7.46e-22,40;UBERON:0002020,3.74e-21,34;UBERON:0002780,3.95e-21,39;UBERON:0001890,3.95e-21,39;UBERON:0006240,3.95e-21,39;UBERON:0010314,4.14e-19,92;UBERON:0003528,5.99e-18,29;UBERON:0002791,5.99e-18,29;UBERON:0001893,5.99e-18,29;UBERON:0000956,3.52e-13,21;UBERON:0001869,3.52e-13,21;UBERON:0000203,3.52e-13,21;UBERON:0002619,4.62e-11,17;UBERON:0002021,5.65e-09,10;UBERON:0000411,5.65e-09,10;UBERON:0001950,5.65e-09,10;UBERON:0003076,5.53e-07,12;UBERON:0003057,5.53e-07,12 | |||
|phase1_expression=5.92550734287738,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0.171200729931206,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0,51.2811039610951,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0.523523743973798,4.1176204162171,1.36609096991689,1.45653105909346,0.629484089877886,0,0.367093504323363,2.34717403304412,4.36050312760893,5.4921545683618,3.30530828426282,1.25987779462826,4.31257693094915,0,0,0,0.514518872071894,0.286533439938757,1.03134418455488,102.979078577535,119.551961315479,94.4408791224207,3.38844532069132,2.66788438833342,10.3488467487361,18.7884608887725,19.1829631035447,11.6844043102178,13.831858991576,32.2474694279366,43.201900266141,36.1758933524377,247.659403478098,212.917273477355,37.7271661582058,37.5714246391487,45.041720543891,355.674295628026,342.074378730218,334.708635965355,116.587478353491,104.570376637554,90.6389264768762,283.649926985403,188.525474360613,280.843179413777,247.488011797881,196.045804460365,135.885196006644,3.10477392666055,8.08615693142605,0,0.860423876981386,0,1.07940638327563,0,0.448026887097336,10.5333315098814,0,0,0,6.19711047017394,0,0,0,0,0.253359865475099,0,7.30776830201984,1.29468941823586,12.7660239595749,5.89850111004862,9.74289530598852,8.76338889573022,7.988299949289,10.347806227942,3.51866455723091,0,1.15679485535929,1.76922110389975,0.808834249737046,0.441683036920787,0,0,161.322219153362,155.618903162397,1.53274233125155,0.11981512450592,0,0,313.511808274294,184.830243538725,55.5392236338861,441.513773288382,418.861919107081,254.748142630021,251.149475228889,0,0.622034853050465,0,12.2056276414155,1.56144531555244,5.28774840196988,8.82304436046211,10.7000420663358,16.2607232971674,19.2170580427275,24.0813432118503,46.8253101037618,0,0.756424320671277,0.351902248327898,0,0,0,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0,0.180062061461015,0.710234206755631,0.196764231747404,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0.268412837520744,333.309568474142,79.3394561444283,0,0,1.91959425481711,3.48355007790658,4.25262622362908,4.43703754171354,4.89231696458715,4.1849637744763,1.89811624617805,1.4822905925161,2.5133520880027,3.58121649674071,4.09424582950152,0.898819408654221,1.51296634912286,3.18626037206988,0.189667900953082,2.39921876480431,0,0.814605311381257,0.581857461502877,0.701358198903186,0.442655759869801,0,0.156998727841375,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0.549122826376163,1.43768206527355,0,0,0,0.179397413521912,0.482443521363367,0.554259570499814,1.13694847062291,0.325929952884052,0.509235257325564,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.797273843287435,0.491589944147214,0.518054945597687,0.433947175744535,10.5553898757491,3.26343410291226,0.983528546038072,0.275936746304732,264.587372299881,235.829913423513,5.90165803356032,0.252470927204373,14.1978698737316,14.4462335389756,26.9279247165999,4.06246956519338,10.4715376818725,10.4738316391868,19.02610297872,23.6727244908163,25.2984177885775,339.957952774272,1.84522110770749,1.06839362200353,0.81443479676788,0.329940245945071,0,0.728341908464944,2.11626489875326,1.13163047853539,1.18120757152309,3.07435147943927,1.03371317267288,1.45413491791002,0.356497378384721,0.948110273807448,1.05418608574999,0,60.938689429928,3.96134406868882,4.39819524861365,6.85878512101095,10.6404140185364,24.0797903762795,24.0241570079097,24.9661258273971,0.23467170806371,0.63549621259146,5.51320995137405,0.49465875882444,0.322928853391811,0.120625849856312,0,0.328281799490123,2.33184669303881,250.695008318209,1.02522528478712,0.412773735926445,0.185194527369712,0.376736914009382,0,0,0,0.139951452323658,0,4.77335309007557,1.42351197111511,3.45643094115643,3.78018692876304,2.50905955217362,3.05707589244649,2.56242258131159,4.1326727862668,2.09404753587224,1.55537967950151,0.621339313086926,0,1.34564891439581,1.82004339502807,3.11121901350476,1.93739735216597,2.19642963138012,1.76035857968631,0.651021924219751,0.524296722128554,0,0.576060012515731,0.316011120628178,0.608175645870493,0.410843828659309,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0.38983152295901,0.192423683280659,0.350630706544707,0.226730383615211,0.443971906748129,0.0897138566094757,0.335769232728157,2.31827512838629,1.12609485270709,0.183151624267265,0.643105137237198,0,468.179277529548,431.324746607225,471.493007560623,385.638541179235,444.618555331147,470.610398073783,384.087802631897,453.47345164679,371.123632958064,451.486991847587,5.39694207437719,7.58147259461959,13.3172212488225,16.531256760644,16.9786661728666,23.5319690816018,17.7797382241292,19.7793654949338,17.6505565275498,19.96307972934,18.5039888919875,17.9195024316772,14.327150642892,17.2867911493147,17.517818031462,15.241398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| ||
|short_description=p1@Syn1 | |short_description=p1@Syn1 | ||
}} | }} |
Latest revision as of 19:35, 1 October 2015
Short description: | p1@Syn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Syn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000041344, ENSMUST00000081893, NM_001110780, NM_013680, uc009stw.2, uc009stx.2_5end |
EntrezGene: | Syn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.84e-16 | 33 |
neuronal stem cell | 1.84e-16 | 33 |
neuroblast | 1.84e-16 | 33 |
electrically signaling cell | 1.84e-16 | 33 |
ectodermal cell | 2.31e-16 | 44 |
neurectodermal cell | 2.31e-16 | 44 |
neural cell | 2.84e-16 | 43 |
CNS neuron (sensu Vertebrata) | 2.58e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.58e-14 | 23 |
electrically responsive cell | 7.35e-12 | 39 |
electrically active cell | 7.35e-12 | 39 |