Personal tools

FFCP PHASE1:Mm9::chr13:58009671..58009682,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20745
|EntrezGene=20745
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BKQ3,Q8BM07,Q8BM19,B2RXY1,Q6DIC9
|UniProt=Q8BKQ3,Q8BM07,Q8BM19,B2RXY1,Q6DIC9
|association_with_transcript=10bp_to_NM_001166463,NM_001166464,NM_001166465,NM_001166466,NM_009262,uc007qtc.2,uc007qtd.2,uc007qte.2,uc011zai.1,uc011zaj.1,uc011zak.1_5end
|association_with_transcript=10bp_to_NM_001166463,NM_001166464,NM_001166465,NM_001166466,NM_009262,uc007qtc.2,uc007qtd.2,uc007qte.2,uc011zai.1,uc011zaj.1,uc011zak.1_5end
|cluster_id=chr13:58009671..58009682,-
|description=CAGE_peak_2_at_Spock1_5end
|description=CAGE_peak_2_at_Spock1_5end
|id=chr13:58009671..58009682,-
|id=chr13:58009671..58009682,-
|ontology_enrichment_celltype=CL:0000540!4.21e-18!33;CL:0000047!4.21e-18!33;CL:0000031!4.21e-18!33;CL:0000404!4.21e-18!33;CL:0000117!9.93e-15!23;CL:0000337!9.93e-15!23;CL:0000221!4.59e-13!44;CL:0000133!4.59e-13!44;CL:0000393!1.18e-12!39;CL:0000211!1.18e-12!39;CL:0002319!2.01e-12!43;CL:0000055!1.98e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,6.91e-22,33;CL:0000047,6.91e-22,33;CL:0000031,6.91e-22,33;CL:0000404,6.91e-22,33;CL:0000117,1.46e-18,23;CL:0000337,1.46e-18,23;CL:0000221,6.24e-17,44;CL:0000133,6.24e-17,44;CL:0000393,1.44e-16,39;CL:0000211,1.44e-16,39;CL:0002319,4.29e-16,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.11e-31!102;UBERON:0000924!4.11e-31!102;UBERON:0006601!4.11e-31!102;UBERON:0000073!5.58e-30!75;UBERON:0001016!5.58e-30!75;UBERON:0002346!6.80e-30!71;UBERON:0003075!6.80e-30!71;UBERON:0007284!6.80e-30!71;UBERON:0001017!4.47e-29!73;UBERON:0005743!4.47e-29!73;UBERON:0000033!1.68e-24!63;UBERON:0001049!5.98e-23!52;UBERON:0005068!5.98e-23!52;UBERON:0006241!5.98e-23!52;UBERON:0007135!5.98e-23!52;UBERON:0000955!1.71e-21!50;UBERON:0006238!1.71e-21!50;UBERON:0003056!4.24e-21!49;UBERON:0002616!6.13e-21!49;UBERON:0002020!6.41e-19!34;UBERON:0003080!7.43e-18!40;UBERON:0002780!2.89e-17!39;UBERON:0001890!2.89e-17!39;UBERON:0006240!2.89e-17!39;UBERON:0002791!2.56e-15!29;UBERON:0003528!2.56e-15!29;UBERON:0001893!2.56e-15!29;UBERON:0007811!7.87e-15!86;UBERON:0000153!9.46e-14!94;UBERON:0000956!9.36e-11!21;UBERON:0001869!9.36e-11!21;UBERON:0000203!9.36e-11!21;UBERON:0002021!1.01e-08!10;UBERON:0000411!1.01e-08!10;UBERON:0001950!1.01e-08!10;UBERON:0002619!1.24e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.62e-35,75;UBERON:0004121,3.26e-34,95;UBERON:0000924,3.26e-34,95;UBERON:0006601,3.26e-34,95;UBERON:0001017,3.72e-34,73;UBERON:0002346,2.03e-33,64;UBERON:0003075,2.03e-33,64;UBERON:0007284,2.03e-33,64;UBERON:0010371,1.25e-29,73;UBERON:0000073,6.47e-29,54;UBERON:0001049,9.83e-27,52;UBERON:0005068,9.83e-27,52;UBERON:0006241,9.83e-27,52;UBERON:0007135,9.83e-27,52;UBERON:0002020,1.22e-24,34;UBERON:0010314,3.42e-24,92;UBERON:0003056,7.81e-24,49;UBERON:0000955,5.39e-22,47;UBERON:0006238,5.39e-22,47;UBERON:0002616,2.60e-21,46;UBERON:0003528,5.89e-20,29;UBERON:0002791,5.89e-20,29;UBERON:0001893,5.89e-20,29;UBERON:0003080,1.16e-19,40;UBERON:0002780,6.36e-19,39;UBERON:0001890,6.36e-19,39;UBERON:0006240,6.36e-19,39;UBERON:0000956,4.93e-14,21;UBERON:0001869,4.93e-14,21;UBERON:0000203,4.93e-14,21;UBERON:0002619,2.78e-11,17;UBERON:0002021,8.31e-11,10;UBERON:0000411,8.31e-11,10;UBERON:0001950,8.31e-11,10;UBERON:0003076,1.43e-07,12;UBERON:0003057,1.43e-07,12;UBERON:0002420,4.00e-07,8;UBERON:0007245,4.00e-07,8;UBERON:0010009,4.00e-07,8;UBERON:0010011,4.00e-07,8;UBERON:0000454,4.00e-07,8
|phase1_expression=7.20669811971573,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,16.1853168687678,11.1088105647127,12.6766280701236,0,0,0,0,0,0,0,3.7328260431052,7.83034442323806,7.36137364729837,31.7072592688222,29.8172530284678,3.67472397644862,3.35459148563827,4.5960939330501,40.7428759697738,33.1987079021488,28.5708151856613,18.9916254331479,20.1272815925301,15.6274011167028,22.8930059181132,14.6318278608237,22.0029476798607,30.0521157183141,25.0574158206421,26.2823218613674,3.63485727999283,2.34271836331035,0,0,0,0,0,0,0.421333260395256,0,0,0,28.8729010542195,0,0,0,0,0,0,0.79928715803342,0,1.92974780784272,1.04091196059682,2.43572382649713,1.15307748628029,3.01445281105245,2.3517741427141,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,24.0080253549469,21.3635640949724,0,0,0,0.127070227073065,16.1773890557209,14.640019290196,4.64921102817598,30.0716073932638,19.4343747571051,21.6099566341943,20.1179166204019,0.407357455401265,0.497627882440372,4.80173241023982,1.47309299120532,1.82168620147785,4.59804208866946,5.22180176435513,4.06903008156431,2.58538696775046,2.3060469651273,1.87403449119458,3.3631438196072,0.646703978798527,0.378212160335639,0.351902248327898,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,24.6039239820029,6.5858951922742,0,0,1.49301775374664,1.16118335930219,1.03093969057675,0.605050573870028,1.11189021922435,0.760902504450237,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,26.1697461680101,21.6841620195576,0,0,5.99465616890888,4.29482618726302,7.53981892064796,0.716906393857656,1.11399337041197,3.67999490025482,2.02405350837447,3.79932615284705,2.76701444562566,7.06906896127976,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.02131881726136,0.540183282093931,0.905510786479282,1.71469628025274,0.532020700926821,1.96205699362278,0.658196082408484,3.65357938937519,0.23467170806371,0.42366414172764,1.10264199027481,0.16488625294148,0.807322133479528,0.241251699712623,0,0,0,21.5093350332191,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.404593039154462,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.410843828659309,0.25984164595559,0,0.39736270956253,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0,0,0.233753804363138,0,0,0,0,0,0,0.73260649706906,0,1.50471631210609,27.1080884456192,27.1591889539234,35.5195218332426,35.4017555627996,32.1988784292202,40.0358765616541,32.4010800111267,27.4695933966774,36.2513927187364,26.9235362110946,0.31136204275253,5.1873233542134,1.36586884603307,1.21553358534147,1.25767897576789,2.20612210140017,2.44471400581777,2.06035057238894,0.64183841918363,0.505394423527595,2.28131369901216,2.45214243801899,1.49826411951812,2.43295579138503,2.01024141344646,3.33405583898152,2.54945517078682,1.73618298417335,2.06042950401653,2.20798380201596,2.05721551431249,1.59728225543404,3.33810665926249,1.88950341622027,2.63506265162926,1.35383372626682,1.82927972872773,2.10455769150274,3.12349461845482,1.12228454331548,1.42362021749009,2.65962102414021,2.45538625901814,2.01417893541756,2.12197272079256,4.49659040288303,1.40358965067245,1.93383948643468,1.14772999241306,0.882365676478062,0.695603506861264
|phase1_expression=7.20669811971573,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,16.1853168687678,11.1088105647127,12.6766280701236,0,0,0,0,0,0,0,3.7328260431052,7.83034442323806,7.36137364729837,31.7072592688222,29.8172530284678,3.67472397644862,3.35459148563827,4.5960939330501,40.7428759697738,33.1987079021488,28.5708151856613,18.9916254331479,20.1272815925301,15.6274011167028,22.8930059181132,14.6318278608237,22.0029476798607,30.0521157183141,25.0574158206421,26.2823218613674,3.63485727999283,2.34271836331035,0,0,0,0,0,0,0.421333260395256,0,0,0,28.8729010542195,0,0,0,0,0,0,0.79928715803342,0,1.92974780784272,1.04091196059682,2.43572382649713,1.15307748628029,3.01445281105245,2.3517741427141,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,24.0080253549469,21.3635640949724,0,0,0,0.127070227073065,16.1773890557209,14.640019290196,4.64921102817598,30.0716073932638,19.4343747571051,21.6099566341943,20.1179166204019,0.407357455401265,0.497627882440372,4.80173241023982,1.47309299120532,1.82168620147785,4.59804208866946,5.22180176435513,4.06903008156431,2.58538696775046,2.3060469651273,1.87403449119458,3.3631438196072,0.646703978798527,0.378212160335639,0.351902248327898,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,24.6039239820029,6.5858951922742,0,0,1.49301775374664,1.16118335930219,1.03093969057675,0.605050573870028,1.11189021922435,0.760902504450237,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,26.1697461680101,21.6841620195576,0,0,5.99465616890888,4.29482618726302,7.53981892064796,0.716906393857656,1.11399337041197,3.67999490025482,2.02405350837447,3.79932615284705,2.76701444562566,7.06906896127976,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.02131881726136,0.540183282093931,0.905510786479282,1.71469628025274,0.532020700926821,1.96205699362278,0.658196082408484,3.65357938937519,0.23467170806371,0.42366414172764,1.10264199027481,0.16488625294148,0.807322133479528,0.241251699712623,0,0,0,21.5093350332191,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.404593039154462,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.410843828659309,0.25984164595559,0,0.39736270956253,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0,0,0.233753804363138,0,0,0,0,0,0,0.73260649706906,0,1.50471631210609,27.1080884456192,27.1591889539234,35.5195218332426,35.4017555627996,32.1988784292202,40.0358765616541,32.4010800111267,27.4695933966774,36.2513927187364,26.9235362110946,0.31136204275253,5.1873233542134,1.36586884603307,1.21553358534147,1.25767897576789,2.20612210140017,2.44471400581777,2.06035057238894,0.64183841918363,0.505394423527595,2.28131369901216,2.45214243801899,1.49826411951812,2.43295579138503,2.01024141344646,3.33405583898152,2.54945517078682,1.73618298417335,2.06042950401653,2.20798380201596,2.05721551431249,1.59728225543404,3.33810665926249,1.88950341622027,2.63506265162926,1.35383372626682,1.82927972872773,2.10455769150274,3.12349461845482,1.12228454331548,1.42362021749009,2.65962102414021,2.45538625901814,2.01417893541756,2.12197272079256,4.49659040288303,1.40358965067245,1.93383948643468,1.14772999241306,0.882365676478062,0.695603506861264
|short_description=p2@Spock1
|short_description=p2@Spock1
}}
}}

Latest revision as of 19:28, 1 October 2015

Short description:p2@Spock1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Spock1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 10bp_to_NM_001166463, NM_001166464, NM_001166465, NM_001166466, NM_009262, uc007qtc.2, uc007qtd.2, uc007qte.2, uc011zai.1, uc011zaj.1, uc011zak.1_5end
EntrezGene:Spock1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Spock1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C316.19
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F131.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.05
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.06
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.28
Mouse Schwann, donor1.CNhs12507.11728-123D93.63
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.01
cerebellum, neonate N30.CNhs11135.1395-42I221.36
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A416.18
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D530.07
cortex, neonate N30.CNhs11107.1392-42F219.43
diencephalon, adult.CNhs10482.20-12F221.61
diencephalon, neonate N30.CNhs11201.1388-42B220.12
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E824.60
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C226.17
medulla oblongata, neonate N30.CNhs11200.1396-42A321.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C921.51
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A335.52
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A836.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.92
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.91e-2233
neuronal stem cell6.91e-2233
neuroblast6.91e-2233
electrically signaling cell6.91e-2233
CNS neuron (sensu Vertebrata)1.46e-1823
neuroblast (sensu Vertebrata)1.46e-1823
ectodermal cell6.24e-1744
neurectodermal cell6.24e-1744
electrically responsive cell1.44e-1639
electrically active cell1.44e-1639
neural cell4.29e-1643

Uber anatomy
Ontology termp-valuen
nervous system2.62e-3575
ectoderm-derived structure3.26e-3495
ectoderm3.26e-3495
presumptive ectoderm3.26e-3495
central nervous system3.72e-3473
neurectoderm2.03e-3364
neural plate2.03e-3364
presumptive neural plate2.03e-3364
ecto-epithelium1.25e-2973
regional part of nervous system6.47e-2954
neural tube9.83e-2752
neural rod9.83e-2752
future spinal cord9.83e-2752
neural keel9.83e-2752
gray matter1.22e-2434
structure with developmental contribution from neural crest3.42e-2492
pre-chordal neural plate7.81e-2449
brain5.39e-2247
future brain5.39e-2247
regional part of brain2.60e-2146
brain grey matter5.89e-2029
regional part of telencephalon5.89e-2029
telencephalon5.89e-2029
anterior neural tube1.16e-1940
regional part of forebrain6.36e-1939
forebrain6.36e-1939
future forebrain6.36e-1939
cerebral cortex4.93e-1421
cerebral hemisphere4.93e-1421
pallium4.93e-1421
regional part of cerebral cortex2.78e-1117
occipital lobe8.31e-1110
visual cortex8.31e-1110
neocortex8.31e-1110
posterior neural tube1.43e-0712
chordal neural plate1.43e-0712
basal ganglion4.00e-078
nuclear complex of neuraxis4.00e-078
aggregate regional part of brain4.00e-078
collection of basal ganglia4.00e-078
cerebral subcortex4.00e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:58009671..58009682,-&oldid=4318444"