FFCP PHASE1:Mm9::chr13:58009671..58009682,-: Difference between revisions
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{{FFCP|EntrezGene=20745|HGNC=|MCL_coexpression_id=1|UniProt=Q8BKQ3,Q8BM07,Q8BM19,B2RXY1,Q6DIC9|association_with_transcript=10bp_to_NM_001166463,NM_001166464,NM_001166465,NM_001166466,NM_009262,uc007qtc.2,uc007qtd.2,uc007qte.2,uc011zai.1,uc011zaj.1,uc011zak.1_5end|description=CAGE_peak_2_at_Spock1_5end|id=chr13:58009671..58009682,-|ontology_enrichment_celltype=CL:0000540!4.21e-18!33;CL:0000047!4.21e-18!33;CL:0000031!4.21e-18!33;CL:0000404!4.21e-18!33;CL:0000117!9.93e-15!23;CL:0000337!9.93e-15!23;CL:0000221!4.59e-13!44;CL:0000133!4.59e-13!44;CL:0000393!1.18e-12!39;CL:0000211!1.18e-12!39;CL:0002319!2.01e-12!43;CL:0000055!1.98e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.91e-22,33;CL:0000047,6.91e-22,33;CL:0000031,6.91e-22,33;CL:0000404,6.91e-22,33;CL:0000117,1.46e-18,23;CL:0000337,1.46e-18,23;CL:0000221,6.24e-17,44;CL:0000133,6.24e-17,44;CL:0000393,1.44e-16,39;CL:0000211,1.44e-16,39;CL:0002319,4.29e-16,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.11e-31!102;UBERON:0000924!4.11e-31!102;UBERON:0006601!4.11e-31!102;UBERON:0000073!5.58e-30!75;UBERON:0001016!5.58e-30!75;UBERON:0002346!6.80e-30!71;UBERON:0003075!6.80e-30!71;UBERON:0007284!6.80e-30!71;UBERON:0001017!4.47e-29!73;UBERON:0005743!4.47e-29!73;UBERON:0000033!1.68e-24!63;UBERON:0001049!5.98e-23!52;UBERON:0005068!5.98e-23!52;UBERON:0006241!5.98e-23!52;UBERON:0007135!5.98e-23!52;UBERON:0000955!1.71e-21!50;UBERON:0006238!1.71e-21!50;UBERON:0003056!4.24e-21!49;UBERON:0002616!6.13e-21!49;UBERON:0002020!6.41e-19!34;UBERON:0003080!7.43e-18!40;UBERON:0002780!2.89e-17!39;UBERON:0001890!2.89e-17!39;UBERON:0006240!2.89e-17!39;UBERON:0002791!2.56e-15!29;UBERON:0003528!2.56e-15!29;UBERON:0001893!2.56e-15!29;UBERON:0007811!7.87e-15!86;UBERON:0000153!9.46e-14!94;UBERON:0000956!9.36e-11!21;UBERON:0001869!9.36e-11!21;UBERON:0000203!9.36e-11!21;UBERON:0002021!1.01e-08!10;UBERON:0000411!1.01e-08!10;UBERON:0001950!1.01e-08!10;UBERON:0002619!1.24e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.62e-35,75;UBERON:0004121,3.26e-34,95;UBERON:0000924,3.26e-34,95;UBERON:0006601,3.26e-34,95;UBERON:0001017,3.72e-34,73;UBERON:0002346,2.03e-33,64;UBERON:0003075,2.03e-33,64;UBERON:0007284,2.03e-33,64;UBERON:0010371,1.25e-29,73;UBERON:0000073,6.47e-29,54;UBERON:0001049,9.83e-27,52;UBERON:0005068,9.83e-27,52;UBERON:0006241,9.83e-27,52;UBERON:0007135,9.83e-27,52;UBERON:0002020,1.22e-24,34;UBERON:0010314,3.42e-24,92;UBERON:0003056,7.81e-24,49;UBERON:0000955,5.39e-22,47;UBERON:0006238,5.39e-22,47;UBERON:0002616,2.60e-21,46;UBERON:0003528,5.89e-20,29;UBERON:0002791,5.89e-20,29;UBERON:0001893,5.89e-20,29;UBERON:0003080,1.16e-19,40;UBERON:0002780,6.36e-19,39;UBERON:0001890,6.36e-19,39;UBERON:0006240,6.36e-19,39;UBERON:0000956,4.93e-14,21;UBERON:0001869,4.93e-14,21;UBERON:0000203,4.93e-14,21;UBERON:0002619,2.78e-11,17;UBERON:0002021,8.31e-11,10;UBERON:0000411,8.31e-11,10;UBERON:0001950,8.31e-11,10;UBERON:0003076,1.43e-07,12;UBERON:0003057,1.43e-07,12;UBERON:0002420,4.00e-07,8;UBERON:0007245,4.00e-07,8;UBERON:0010009,4.00e-07,8;UBERON:0010011,4.00e-07,8;UBERON:0000454,4.00e-07,8|phase1_expression=7.20669811971573,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,16.1853168687678,11.1088105647127,12.6766280701236,0,0,0,0,0,0,0,3.7328260431052,7.83034442323806,7.36137364729837,31.7072592688222,29.8172530284678,3.67472397644862,3.35459148563827,4.5960939330501,40.7428759697738,33.1987079021488,28.5708151856613,18.9916254331479,20.1272815925301,15.6274011167028,22.8930059181132,14.6318278608237,22.0029476798607,30.0521157183141,25.0574158206421,26.2823218613674,3.63485727999283,2.34271836331035,0,0,0,0,0,0,0.421333260395256,0,0,0,28.8729010542195,0,0,0,0,0,0,0.79928715803342,0,1.92974780784272,1.04091196059682,2.43572382649713,1.15307748628029,3.01445281105245,2.3517741427141,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,24.0080253549469,21.3635640949724,0,0,0,0.127070227073065,16.1773890557209,14.640019290196,4.64921102817598,30.0716073932638,19.4343747571051,21.6099566341943,20.1179166204019,0.407357455401265,0.497627882440372,4.80173241023982,1.47309299120532,1.82168620147785,4.59804208866946,5.22180176435513,4.06903008156431,2.58538696775046,2.3060469651273,1.87403449119458,3.3631438196072,0.646703978798527,0.378212160335639,0.351902248327898,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,24.6039239820029,6.5858951922742,0,0,1.49301775374664,1.16118335930219,1.03093969057675,0.605050573870028,1.11189021922435,0.760902504450237,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,26.1697461680101,21.6841620195576,0,0,5.99465616890888,4.29482618726302,7.53981892064796,0.716906393857656,1.11399337041197,3.67999490025482,2.02405350837447,3.79932615284705,2.76701444562566,7.06906896127976,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.02131881726136,0.540183282093931,0.905510786479282,1.71469628025274,0.532020700926821,1.96205699362278,0.658196082408484,3.65357938937519,0.23467170806371,0.42366414172764,1.10264199027481,0.16488625294148,0.807322133479528,0.241251699712623,0,0,0,21.5093350332191,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.404593039154462,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.410843828659309,0.25984164595559,0,0.39736270956253,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0,0,0.233753804363138,0,0,0,0,0,0,0.73260649706906,0,1.50471631210609,27.1080884456192,27.1591889539234,35.5195218332426,35.4017555627996,32.1988784292202,40.0358765616541,32.4010800111267,27.4695933966774,36.2513927187364,26.9235362110946,0.31136204275253,5.1873233542134,1.36586884603307,1.21553358534147,1.25767897576789,2.20612210140017,2.44471400581777,2.06035057238894,0.64183841918363,0.505394423527595,2.28131369901216,2.45214243801899,1.49826411951812,2.43295579138503,2.01024141344646,3.33405583898152,2.54945517078682,1.73618298417335,2.06042950401653,2.20798380201596,2.05721551431249,1.59728225543404,3.33810665926249,1.88950341622027,2.63506265162926,1.35383372626682,1.82927972872773,2.10455769150274,3.12349461845482,1.12228454331548,1.42362021749009,2.65962102414021,2.45538625901814,2.01417893541756,2.12197272079256,4.49659040288303,1.40358965067245,1.93383948643468,1.14772999241306,0.882365676478062,0.695603506861264|short_description=p2@Spock1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20745 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BKQ3,Q8BM07,Q8BM19,B2RXY1,Q6DIC9 | |||
|association_with_transcript=10bp_to_NM_001166463,NM_001166464,NM_001166465,NM_001166466,NM_009262,uc007qtc.2,uc007qtd.2,uc007qte.2,uc011zai.1,uc011zaj.1,uc011zak.1_5end | |||
|cluster_id=chr13:58009671..58009682,- | |||
|description=CAGE_peak_2_at_Spock1_5end | |||
|id=chr13:58009671..58009682,- | |||
|ontology_enrichment_celltype=CL:0000540!4.21e-18!33;CL:0000047!4.21e-18!33;CL:0000031!4.21e-18!33;CL:0000404!4.21e-18!33;CL:0000117!9.93e-15!23;CL:0000337!9.93e-15!23;CL:0000221!4.59e-13!44;CL:0000133!4.59e-13!44;CL:0000393!1.18e-12!39;CL:0000211!1.18e-12!39;CL:0002319!2.01e-12!43;CL:0000055!1.98e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.91e-22,33;CL:0000047,6.91e-22,33;CL:0000031,6.91e-22,33;CL:0000404,6.91e-22,33;CL:0000117,1.46e-18,23;CL:0000337,1.46e-18,23;CL:0000221,6.24e-17,44;CL:0000133,6.24e-17,44;CL:0000393,1.44e-16,39;CL:0000211,1.44e-16,39;CL:0002319,4.29e-16,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.11e-31!102;UBERON:0000924!4.11e-31!102;UBERON:0006601!4.11e-31!102;UBERON:0000073!5.58e-30!75;UBERON:0001016!5.58e-30!75;UBERON:0002346!6.80e-30!71;UBERON:0003075!6.80e-30!71;UBERON:0007284!6.80e-30!71;UBERON:0001017!4.47e-29!73;UBERON:0005743!4.47e-29!73;UBERON:0000033!1.68e-24!63;UBERON:0001049!5.98e-23!52;UBERON:0005068!5.98e-23!52;UBERON:0006241!5.98e-23!52;UBERON:0007135!5.98e-23!52;UBERON:0000955!1.71e-21!50;UBERON:0006238!1.71e-21!50;UBERON:0003056!4.24e-21!49;UBERON:0002616!6.13e-21!49;UBERON:0002020!6.41e-19!34;UBERON:0003080!7.43e-18!40;UBERON:0002780!2.89e-17!39;UBERON:0001890!2.89e-17!39;UBERON:0006240!2.89e-17!39;UBERON:0002791!2.56e-15!29;UBERON:0003528!2.56e-15!29;UBERON:0001893!2.56e-15!29;UBERON:0007811!7.87e-15!86;UBERON:0000153!9.46e-14!94;UBERON:0000956!9.36e-11!21;UBERON:0001869!9.36e-11!21;UBERON:0000203!9.36e-11!21;UBERON:0002021!1.01e-08!10;UBERON:0000411!1.01e-08!10;UBERON:0001950!1.01e-08!10;UBERON:0002619!1.24e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.62e-35,75;UBERON:0004121,3.26e-34,95;UBERON:0000924,3.26e-34,95;UBERON:0006601,3.26e-34,95;UBERON:0001017,3.72e-34,73;UBERON:0002346,2.03e-33,64;UBERON:0003075,2.03e-33,64;UBERON:0007284,2.03e-33,64;UBERON:0010371,1.25e-29,73;UBERON:0000073,6.47e-29,54;UBERON:0001049,9.83e-27,52;UBERON:0005068,9.83e-27,52;UBERON:0006241,9.83e-27,52;UBERON:0007135,9.83e-27,52;UBERON:0002020,1.22e-24,34;UBERON:0010314,3.42e-24,92;UBERON:0003056,7.81e-24,49;UBERON:0000955,5.39e-22,47;UBERON:0006238,5.39e-22,47;UBERON:0002616,2.60e-21,46;UBERON:0003528,5.89e-20,29;UBERON:0002791,5.89e-20,29;UBERON:0001893,5.89e-20,29;UBERON:0003080,1.16e-19,40;UBERON:0002780,6.36e-19,39;UBERON:0001890,6.36e-19,39;UBERON:0006240,6.36e-19,39;UBERON:0000956,4.93e-14,21;UBERON:0001869,4.93e-14,21;UBERON:0000203,4.93e-14,21;UBERON:0002619,2.78e-11,17;UBERON:0002021,8.31e-11,10;UBERON:0000411,8.31e-11,10;UBERON:0001950,8.31e-11,10;UBERON:0003076,1.43e-07,12;UBERON:0003057,1.43e-07,12;UBERON:0002420,4.00e-07,8;UBERON:0007245,4.00e-07,8;UBERON:0010009,4.00e-07,8;UBERON:0010011,4.00e-07,8;UBERON:0000454,4.00e-07,8 | |||
|phase1_expression=7.20669811971573,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,16.1853168687678,11.1088105647127,12.6766280701236,0,0,0,0,0,0,0,3.7328260431052,7.83034442323806,7.36137364729837,31.7072592688222,29.8172530284678,3.67472397644862,3.35459148563827,4.5960939330501,40.7428759697738,33.1987079021488,28.5708151856613,18.9916254331479,20.1272815925301,15.6274011167028,22.8930059181132,14.6318278608237,22.0029476798607,30.0521157183141,25.0574158206421,26.2823218613674,3.63485727999283,2.34271836331035,0,0,0,0,0,0,0.421333260395256,0,0,0,28.8729010542195,0,0,0,0,0,0,0.79928715803342,0,1.92974780784272,1.04091196059682,2.43572382649713,1.15307748628029,3.01445281105245,2.3517741427141,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,24.0080253549469,21.3635640949724,0,0,0,0.127070227073065,16.1773890557209,14.640019290196,4.64921102817598,30.0716073932638,19.4343747571051,21.6099566341943,20.1179166204019,0.407357455401265,0.497627882440372,4.80173241023982,1.47309299120532,1.82168620147785,4.59804208866946,5.22180176435513,4.06903008156431,2.58538696775046,2.3060469651273,1.87403449119458,3.3631438196072,0.646703978798527,0.378212160335639,0.351902248327898,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,24.6039239820029,6.5858951922742,0,0,1.49301775374664,1.16118335930219,1.03093969057675,0.605050573870028,1.11189021922435,0.760902504450237,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,26.1697461680101,21.6841620195576,0,0,5.99465616890888,4.29482618726302,7.53981892064796,0.716906393857656,1.11399337041197,3.67999490025482,2.02405350837447,3.79932615284705,2.76701444562566,7.06906896127976,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.02131881726136,0.540183282093931,0.905510786479282,1.71469628025274,0.532020700926821,1.96205699362278,0.658196082408484,3.65357938937519,0.23467170806371,0.42366414172764,1.10264199027481,0.16488625294148,0.807322133479528,0.241251699712623,0,0,0,21.5093350332191,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.404593039154462,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.410843828659309,0.25984164595559,0,0.39736270956253,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0,0,0.233753804363138,0,0,0,0,0,0,0.73260649706906,0,1.50471631210609,27.1080884456192,27.1591889539234,35.5195218332426,35.4017555627996,32.1988784292202,40.0358765616541,32.4010800111267,27.4695933966774,36.2513927187364,26.9235362110946,0.31136204275253,5.1873233542134,1.36586884603307,1.21553358534147,1.25767897576789,2.20612210140017,2.44471400581777,2.06035057238894,0.64183841918363,0.505394423527595,2.28131369901216,2.45214243801899,1.49826411951812,2.43295579138503,2.01024141344646,3.33405583898152,2.54945517078682,1.73618298417335,2.06042950401653,2.20798380201596,2.05721551431249,1.59728225543404,3.33810665926249,1.88950341622027,2.63506265162926,1.35383372626682,1.82927972872773,2.10455769150274,3.12349461845482,1.12228454331548,1.42362021749009,2.65962102414021,2.45538625901814,2.01417893541756,2.12197272079256,4.49659040288303,1.40358965067245,1.93383948643468,1.14772999241306,0.882365676478062,0.695603506861264 | |||
|short_description=p2@Spock1 | |||
}} |
Latest revision as of 19:28, 1 October 2015
Short description: | p2@Spock1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Spock1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 10bp_to_NM_001166463, NM_001166464, NM_001166465, NM_001166466, NM_009262, uc007qtc.2, uc007qtd.2, uc007qte.2, uc011zai.1, uc011zaj.1, uc011zak.1_5end |
EntrezGene: | Spock1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.91e-22 | 33 |
neuronal stem cell | 6.91e-22 | 33 |
neuroblast | 6.91e-22 | 33 |
electrically signaling cell | 6.91e-22 | 33 |
CNS neuron (sensu Vertebrata) | 1.46e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.46e-18 | 23 |
ectodermal cell | 6.24e-17 | 44 |
neurectodermal cell | 6.24e-17 | 44 |
electrically responsive cell | 1.44e-16 | 39 |
electrically active cell | 1.44e-16 | 39 |
neural cell | 4.29e-16 | 43 |