FFCP PHASE1:Mm9::chr5:121835581..121835599,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231712 | |EntrezGene=231712 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=247 | |||
|TSSclassifier=NA | |||
|UniProt=D3YX05 | |UniProt=D3YX05 | ||
|association_with_transcript=0bp_to_ENSMUST00000155379_5end | |association_with_transcript=0bp_to_ENSMUST00000155379_5end | ||
|cluster_id=chr5:121835581..121835599,- | |||
|description=CAGE_peak_1_at_Trafd1_5end | |description=CAGE_peak_1_at_Trafd1_5end | ||
|id=chr5:121835581..121835599,- | |id=chr5:121835581..121835599,- | ||
|ontology_enrichment_celltype=CL:0002319!7.71e-12!43;CL:0000055!9.10e-12!50;CL:0000221!2.00e-11!44;CL:0000133!2.00e-11!44;CL:0000393!7.88e-10!39;CL:0000211!7.88e-10!39;CL:0000540!3.26e-09!33;CL:0000047!3.26e-09!33;CL:0000031!3.26e-09!33;CL:0000404!3.26e-09!33;CL:0000117!1.63e-07!23;CL:0000337!1.63e-07!23;CL:0000144!5.42e-07!121;CL:0000012!5.42e-07!121;CL:0002321!8.25e-07!70;CL:0000220!8.25e-07!70;CL:0000723!9.49e-07!91;CL:0000048!9.49e-07!91 | |ontology_enrichment_celltype=CL:0002319!7.71e-12!43;CL:0000055!9.10e-12!50;CL:0000221!2.00e-11!44;CL:0000133!2.00e-11!44;CL:0000393!7.88e-10!39;CL:0000211!7.88e-10!39;CL:0000540!3.26e-09!33;CL:0000047!3.26e-09!33;CL:0000031!3.26e-09!33;CL:0000404!3.26e-09!33;CL:0000117!1.63e-07!23;CL:0000337!1.63e-07!23;CL:0000144!5.42e-07!121;CL:0000012!5.42e-07!121;CL:0002321!8.25e-07!70;CL:0000220!8.25e-07!70;CL:0000723!9.49e-07!91;CL:0000048!9.49e-07!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.71e-12,43;CL:0000221,2.00e-11,44;CL:0000133,2.00e-11,44;CL:0000393,7.88e-10,39;CL:0000211,7.88e-10,39;CL:0000540,3.26e-09,33;CL:0000047,3.26e-09,33;CL:0000031,3.26e-09,33;CL:0000404,3.26e-09,33;CL:0000117,1.63e-07,23;CL:0000337,1.63e-07,23;CL:0002321,8.25e-07,70;CL:0000723,9.49e-07,91;CL:0000048,9.49e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.92e-08!73;UBERON:0005743!3.92e-08!73;UBERON:0000073!2.34e-07!75;UBERON:0001016!2.34e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.92e-08,73;UBERON:0001016,2.34e-07,75 | |||
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| |phase1_expression=16.4953312517938,12.2141392673776,13.1949779422965,12.0985684522732,12.0214975187123,7.89032577985882,7.2419918584613,5.55230290798778,4.36445038670167,1.87251621057595,0.171217968225505,0.398860794976682,7.01922992717943,3.4968160967599,8.66085380720723,10.7311891716608,12.5921138063066,14.1957974411207,10.9691546884591,9.76096199135469,11.5658874605455,12.2127869977089,13.0599894569468,7.35965144849671,8.71755268055246,14.3557991028755,8.61523992318149,13.3592164265251,5.70070258369122,10.3332353201572,10.8647950221099,4.44521471421742,3.07532393792285,0,4.91047753577167,3.15845826181135,3.26670970019791,26.7860243671621,37.5040965371424,24.0820922227947,28.8233429135197,26.6387739133794,19.4204141212461,14.7299277031425,16.2203089951223,12.2976323948327,35.2076104956618,30.3054967368821,23.726107735323,22.9427280907654,25.8974880006921,21.5628846547457,13.7581736967344,13.0565185562042,12.0993767691287,9.00408026125814,19.7708073557742,13.4074743992135,38.4401275633236,26.9785399428737,30.4239073682966,23.041428180701,24.0109594950008,54.4439328955246,67.2429126545543,58.9698495405263,25.7656095045828,20.3635701820424,31.3142629171603,27.1361936046698,31.3384192413559,17.9960120174396,13.2521124570968,25.6005770359254,27.8910320663068,22.9804696652505,11.0115880999389,10.0872997087298,9.98442466165583,37.7194782908354,46.8416735244337,30.2129754922921,10.0505879640497,6.75315132038016,13.5990440521361,17.3830865429464,16.7998583342941,24.9775257405903,5.98236927332154,8.76630097238712,17.102004833399,6.88339101585109,13.599426674155,4.31762553310254,7.14754059192436,5.37632264516803,7.3031098468511,10.3962496772615,12.4697282209377,8.83348936275851,9.57735254481427,15.3991772897181,12.7402619853323,14.2213340630666,6.061749148314,5.06719730950197,8.59391556525132,6.73684890342454,14.5005214842416,7.57054909230606,10.9295755862666,7.00270600117925,7.84092690670599,6.93324146542064,10.1126288136706,7.91699525376955,10.1349936771093,6.07317299063629,18.5768215909474,12.2942805960031,10.8212344045593,9.21262980956922,3.72783522436244,12.0040126774734,15.4990563041957,13.0283098156382,15.2165208122519,18.5969846607956,12.0716715719411,7.18995069143149,7.32000964509802,15.2041766056566,9.38651329038293,9.71718737855256,7.48036960414416,8.92326946872667,15.4795833052481,9.57933673697716,5.55990068554084,13.0473950649614,8.71806967850115,10.3455946995063,11.1638520479317,12.5084998803643,18.9821832632205,17.1672385181699,23.2380276908127,23.5420067372504,9.7005596819779,11.3463648100692,9.67731182901719,10.9597866213787,7.78532297831674,12.537077994798,6.99659263787008,9.35461054046918,16.1509033082044,15.9555702411123,14.4923384691752,13.6703009873431,11.9608290590359,14.9451511012642,14.4414288706978,15.7411385397923,13.7297730469767,16.7424440220294,11.8040296615832,22.5357110768637,16.785104691175,14.7750717671186,13.2142159559745,14.9123987173839,11.1970558798436,15.0311189011616,8.41159794256509,24.3883931338904,9.58214470653014,8.99131926656051,15.9966187901425,12.7730169523241,9.665059599157,8.87407508342707,9.78463392917429,9.13083005340284,12.8122846617018,10.8701310117847,16.8394589896181,21.089386036362,21.6410136702223,9.88701349519644,7.99710784536369,8.96135729644652,9.293727146701,7.88314737007129,3.38123207019241,6.31319116320474,5.62462212786115,11.5022744620122,9.35900749439008,6.34723636312289,6.12295038581362,6.54004968785543,5.92905254174298,3.67059232575407,5.70021085828289,6.07127703439105,4.05720242777006,8.68237775108701,9.42115651591253,10.64475708568,10.2145192868272,9.33508804839477,11.5014565221884,12.2806512730606,6.24075346229121,11.8712072635143,6.99649912735457,9.64887042726734,13.3022296919955,6.82169082373745,7.98528384565927,9.50572480341054,6.57132695207806,13.0654880804616,14.9967493758189,20.0987657293533,14.6600684018758,17.2742457926044,24.237124835938,14.4199716949849,20.3768278601757,16.7792907954553,63.3323392544944,71.7955502640697,7.86822836830458,9.3818493743609,6.42202359951168,7.85318300167761,4.42624352517024,7.57412781613119,12.304820557234,12.1036010731958,18.9572590004863,10.7535959078648,17.3782965784267,13.0215204162863,12.5491317519217,21.3346776275258,17.392662229647,17.0300297703558,7.80670468645477,12.2865266530406,16.9402437727719,12.5377293459127,3.98235415019888,8.01176099311439,9.37203026590728,6.03536255218874,4.42952839321159,9.22305443831782,10.0787034335606,8.36127577798263,11.7644134866958,8.53299246426703,3.16255825724996,6.18813259489121,16.6815406819356,7.74262704334634,11.2542054890996,10.502514716548,8.15765074754458,11.4156043265325,10.3665882979336,19.4857567433344,6.57080782578389,11.6507638975101,19.8475558249466,7.25499512942512,12.1098320021929,8.86599996443891,10.2660215842697,7.55048138827282,12.2421951384537,5.93360966433631,14.5240248678175,13.002372681683,13.3340059706192,11.3021074202815,8.74843057414561,11.8964650067392,18.5276488693302,17.4939315404573,18.2423965421839,5.72802370809068,9.64824780422463,10.5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| ||
|short_description=p1@Trafd1 | |short_description=p1@Trafd1 | ||
}} | }} |
Latest revision as of 19:27, 1 October 2015
Short description: | p1@Trafd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trafd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | 0bp_to_ENSMUST00000155379_5end |
EntrezGene: | Trafd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.71e-12 | 43 |
ectodermal cell | 2.00e-11 | 44 |
neurectodermal cell | 2.00e-11 | 44 |
electrically responsive cell | 7.88e-10 | 39 |
electrically active cell | 7.88e-10 | 39 |
neuron | 3.26e-09 | 33 |
neuronal stem cell | 3.26e-09 | 33 |
neuroblast | 3.26e-09 | 33 |
electrically signaling cell | 3.26e-09 | 33 |
CNS neuron (sensu Vertebrata) | 1.63e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.63e-07 | 23 |
embryonic cell | 8.25e-07 | 70 |
somatic stem cell | 9.49e-07 | 91 |
multi fate stem cell | 9.49e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.92e-08 | 73 |
nervous system | 2.34e-07 | 75 |