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FFCP PHASE1:Mm9::chrX:20240042..20240069,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22201
|EntrezGene=22201
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=B9EHN0,Q02053
|UniProt=B9EHN0,Q02053
|association_with_transcript=-11bp_to_NM_001136085,uc009stm.2_5end
|association_with_transcript=-11bp_to_NM_001136085,uc009stm.2_5end
|cluster_id=chrX:20240042..20240069,+
|description=CAGE_peak_1_at_Uba1_5end
|description=CAGE_peak_1_at_Uba1_5end
|id=chrX:20240042..20240069,+
|id=chrX:20240042..20240069,+
|ontology_enrichment_celltype=CL:0000221!2.75e-18!44;CL:0000133!2.75e-18!44;CL:0002319!2.90e-18!43;CL:0002321!5.06e-17!70;CL:0000220!5.06e-17!70;CL:0000055!4.95e-16!50;CL:0000540!6.80e-16!33;CL:0000047!6.80e-16!33;CL:0000031!6.80e-16!33;CL:0000404!6.80e-16!33;CL:0000117!2.67e-15!23;CL:0000337!2.67e-15!23;CL:0000393!9.80e-14!39;CL:0000211!9.80e-14!39;CL:0002371!4.16e-07!118
|ontology_enrichment_celltype=CL:0000221!2.75e-18!44;CL:0000133!2.75e-18!44;CL:0002319!2.90e-18!43;CL:0002321!5.06e-17!70;CL:0000220!5.06e-17!70;CL:0000055!4.95e-16!50;CL:0000540!6.80e-16!33;CL:0000047!6.80e-16!33;CL:0000031!6.80e-16!33;CL:0000404!6.80e-16!33;CL:0000117!2.67e-15!23;CL:0000337!2.67e-15!23;CL:0000393!9.80e-14!39;CL:0000211!9.80e-14!39;CL:0002371!4.16e-07!118
|ontology_enrichment_celltype_v019_2=CL:0000221,2.75e-18,44;CL:0000133,2.75e-18,44;CL:0002319,2.90e-18,43;CL:0002321,5.06e-17,70;CL:0000540,6.80e-16,33;CL:0000047,6.80e-16,33;CL:0000031,6.80e-16,33;CL:0000404,6.80e-16,33;CL:0000117,2.67e-15,23;CL:0000337,2.67e-15,23;CL:0000393,9.80e-14,39;CL:0000211,9.80e-14,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.76e-24!75;UBERON:0001016!3.76e-24!75;UBERON:0001017!1.12e-23!73;UBERON:0005743!1.12e-23!73;UBERON:0004121!8.04e-18!102;UBERON:0000924!8.04e-18!102;UBERON:0006601!8.04e-18!102;UBERON:0001049!2.37e-16!52;UBERON:0005068!2.37e-16!52;UBERON:0006241!2.37e-16!52;UBERON:0007135!2.37e-16!52;UBERON:0002020!4.56e-16!34;UBERON:0000955!1.93e-15!50;UBERON:0006238!1.93e-15!50;UBERON:0002346!4.28e-15!71;UBERON:0003075!4.28e-15!71;UBERON:0007284!4.28e-15!71;UBERON:0002616!4.81e-15!49;UBERON:0003080!5.03e-14!40;UBERON:0002780!7.31e-14!39;UBERON:0001890!7.31e-14!39;UBERON:0006240!7.31e-14!39;UBERON:0002791!6.03e-13!29;UBERON:0003528!6.03e-13!29;UBERON:0001893!6.03e-13!29;UBERON:0000033!7.34e-12!63;UBERON:0003056!1.64e-10!49;UBERON:0000956!4.69e-09!21;UBERON:0001869!4.69e-09!21;UBERON:0000203!4.69e-09!21;UBERON:0002619!3.74e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.76e-24,75;UBERON:0001017,1.12e-23,73;UBERON:0000073,3.97e-18,54;UBERON:0001049,2.37e-16,52;UBERON:0005068,2.37e-16,52;UBERON:0006241,2.37e-16,52;UBERON:0007135,2.37e-16,52;UBERON:0004121,4.29e-16,95;UBERON:0000924,4.29e-16,95;UBERON:0006601,4.29e-16,95;UBERON:0002020,4.56e-16,34;UBERON:0010314,2.94e-15,92;UBERON:0003080,5.03e-14,40;UBERON:0000955,5.03e-14,47;UBERON:0006238,5.03e-14,47;UBERON:0002780,7.31e-14,39;UBERON:0001890,7.31e-14,39;UBERON:0006240,7.31e-14,39;UBERON:0002616,1.23e-13,46;UBERON:0002346,1.43e-13,64;UBERON:0003075,1.43e-13,64;UBERON:0007284,1.43e-13,64;UBERON:0003528,6.03e-13,29;UBERON:0002791,6.03e-13,29;UBERON:0001893,6.03e-13,29;UBERON:0010371,4.16e-11,73;UBERON:0003056,1.64e-10,49;UBERON:0000956,4.69e-09,21;UBERON:0001869,4.69e-09,21;UBERON:0000203,4.69e-09,21;UBERON:0002619,3.74e-07,17
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6866,69.3394288075964,71.0900206449194,75.3350844924313,79.1653713278898,72.5697341268449,86.1177049127457,73.3620748831548,78.2887534489526,28.7483398728937,94.3449405537506,102.253347102486,97.0311429836798,117.147959894302,96.6429037807251,79.2161360858839,73.8258862065197,67.9488551878606,30.6811833449028,29.6670906445601,57.8300350749566,87.9827434359313,77.3413507451149,67.9485904173868,76.4443990500146,78.8764978481622,69.593165272062,58.6327422883072,59.8731048192515,60.1271704507949,59.5882754158727,62.5679594349211,57.823316825838,58.555327992966,73.9141050585589,54.830530483394,63.5174104795088,71.5188465710974,63.3661868425585,70.0055633432909,82.4182309202693,97.1088757228168,86.2704018940825,125.374909060989,115.081309126794,111.141729607243,97.0970480241835,130.165678756422,118.596841890183,95.8531950329164,90.5145618480683,81.5656336171568,104.587582973868,112.090335390911,72.2235020855866,103.293831481251,96.756473393181,84.6837177017049,87.8771970391067,78.2308481861686,88.5950746127245,65.1465995471385,85.6643547879274,78.8320622658646,89.9747648411583,92.7050923951836,85.0894275460713,83.5111718614617,90.0195076525009,82.3937557467923,86.8091492086673,86.5380391686944,101.567254892734,89.8317441249788,73.120032137647,77.0148893529847,78.4870649814574,82.5339266242449,76.7454493577506,79.2078122539105,81.0254711228556,84.7417670398177,95.3941861818155,94.0775693724701,83.0392786426,87.9846742814832,80.7220942578883,89.3157608842685,136.396575554118,89.5958060345914,77.9981926195323,73.263431182367,64.4126943828985,59.3581659188279
|phase1_expression=100.413327134706,172.044875966205,169.259717052907,148.207463540347,179.821567050739,103.413631497724,103.490399783818,64.5616617207881,87.429796456185,89.6467135813235,70.199366972457,61.0257016314324,73.1027116806249,61.7188041078122,64.6232937922386,79.7752553515914,104.934281719222,63.4078952370058,61.8386095561882,57.7169926445321,59.9555195565042,40.2128352363585,45.9711628884526,113.274635337732,104.840041447697,152.745702454595,130.951646832359,121.310304002156,134.1565341362,121.730552674047,98.8918077522659,64.7731286928824,67.6571266343027,63.3926724061755,49.9713302169705,63.3353998815856,53.9007100532654,127.23361574402,104.698936166189,110.463509978471,95.8817325490553,122.265141807562,106.812277666854,58.0384330867411,63.0564512185381,84.7985994986969,64.1560902365392,184.885332610619,165.423695599057,164.293264717769,128.507535052083,148.065141295921,77.1799987865587,90.6702677514181,70.9157916190599,98.7876234378036,89.9715001407696,97.4620254404366,274.745753847334,260.792552781112,257.335549823509,161.289997264907,153.847999727227,91.339821304062,79.109309005358,82.4156933337476,114.447242218031,86.8333370026713,206.860776555413,230.050118917201,224.627058723276,186.815743800088,197.014738528839,235.672297689572,274.022201641138,221.531727573015,136.543692439242,120.409159814332,117.969817540795,267.201618941373,296.328477628205,214.095395298828,136.799669510677,136.188551627667,126.364150911422,165.875893621675,172.696848809312,225.729728894439,94.3548368931473,102.248320824481,75.6546315511379,81.7402683132317,65.2772480359441,114.417076627217,89.0193691903307,79.3007590162284,68.2559881840314,78.3979483859066,70.4020072473774,72.7879523491301,91.9707531141724,79.562415996877,114.662357867991,127.9920065676,99.3693878241473,103.37082511384,111.720902348267,71.9358442230078,34.697676408721,92.6278947764507,113.459403705053,99.8646768863823,110.00359219114,97.3668257969942,79.0196111951936,114.859264475323,54.3828929015623,56.1045504849257,63.6919597403909,62.4420040796999,60.068893021227,53.3362778448744,72.6927868750676,89.2981430885219,84.1975761390089,91.1981687094671,48.16568005138,64.789494947288,58.5793746806828,96.9145436949203,88.2976163439949,179.183106112945,95.6033761057521,87.9661173216337,102.023929878744,103.185443311094,66.8066226858075,58.844497098574,72.5314316704646,65.2369753248069,71.9566049583752,95.4093733398913,92.1918104603388,76.2566378248718,67.4241706589659,68.2846129118249,88.8292348826229,66.486766279927,110.586380374548,89.0689637590429,91.8464868135813,85.2671399143266,66.4532925649179,82.5357634657535,62.1462051951989,82.4001864628562,61.7947604835647,59.7047144506139,52.286083888789,110.605162533958,89.1199027928166,96.693327004565,111.033280989464,78.5089284672141,85.9267818782697,87.8978311156542,108.650727566846,88.858425541416,83.1027242063076,76.6662057249375,68.4220752567022,83.3339928324394,75.9643398907035,79.047580649859,100.939175310781,135.113756054,107.716523252718,92.5576983322405,69.9585461755567,67.813108183248,69.3306941912862,79.8666757508436,82.0574981787571,81.987244854513,106.769038847515,76.5850139466651,67.106500749672,69.6347652144028,67.0676459689773,90.7807602740764,74.3514891568948,78.4616616622207,84.0228801222152,75.6325153476405,86.7849564682719,59.8734903865224,67.883370508669,58.2828663288547,69.4969542995588,71.0004811781886,59.1885203961983,75.2722699922983,75.0025146530487,78.7508898979964,78.2304800550548,90.3945691787112,71.81248297153,77.9002226000306,76.3877555344259,85.4457528228908,48.6405680325106,66.1693005783276,37.3797336971122,64.7525248943196,71.7686648163489,64.1550349985664,79.652451603729,78.1558504608655,54.686944289315,79.5863929436036,94.519686336375,68.577014653176,72.2845964728587,62.3123277683555,76.8880960061824,65.955172975936,56.2757464459102,71.0901653772568,60.9117216271601,60.7932897595388,62.857333399186,59.0168159012567,107.061811596883,77.7785127860755,81.63286932116,72.5713642781446,88.7844762632489,96.2307946921988,66.3936528775535,73.2165688892682,91.4973836307144,100.733196028533,97.3713757752251,94.8706127871632,100.48220201116,88.3198776061157,90.2727864735014,101.997294411048,99.6125200425239,111.819818114789,80.4800283130883,94.3747699436453,75.0908882619986,71.2670931241353,86.2843399209758,86.6726871073284,96.4412146717556,100.149297350382,129.93283286754,107.602301780375,78.0453445368028,72.3432121660236,81.2814022717165,96.7072479283597,82.226514688499,87.6652117609588,87.4929786787235,84.6287141947158,94.302480477628,97.3090139043429,90.6208593912018,103.453914209201,88.362824063339,121.177049747611,78.1456787852156,49.3568725112701,86.2266036394901,58.039961035401,58.6115868906137,72.0136323642181,84.7543642422269,72.0578549880819,78.4083450534298,81.0308569785927,55.8747780208978,81.5228128454729,57.5954980119803,51.6129572192853,55.9079391378993,53.5340925303263,53.0332701580829,53.3215033353137,55.5563894693784,60.1442489349522,93.3191181064349,89.2572460686866,69.3394288075964,71.0900206449194,75.3350844924313,79.1653713278898,72.5697341268449,86.1177049127457,73.3620748831548,78.2887534489526,28.7483398728937,94.3449405537506,102.253347102486,97.0311429836798,117.147959894302,96.6429037807251,79.2161360858839,73.8258862065197,67.9488551878606,30.6811833449028,29.6670906445601,57.8300350749566,87.9827434359313,77.3413507451149,67.9485904173868,76.4443990500146,78.8764978481622,69.593165272062,58.6327422883072,59.8731048192515,60.1271704507949,59.5882754158727,62.5679594349211,57.823316825838,58.555327992966,73.9141050585589,54.830530483394,63.5174104795088,71.5188465710974,63.3661868425585,70.0055633432909,82.4182309202693,97.1088757228168,86.2704018940825,125.374909060989,115.081309126794,111.141729607243,97.0970480241835,130.165678756422,118.596841890183,95.8531950329164,90.5145618480683,81.5656336171568,104.587582973868,112.090335390911,72.2235020855866,103.293831481251,96.756473393181,84.6837177017049,87.8771970391067,78.2308481861686,88.5950746127245,65.1465995471385,85.6643547879274,78.8320622658646,89.9747648411583,92.7050923951836,85.0894275460713,83.5111718614617,90.0195076525009,82.3937557467923,86.8091492086673,86.5380391686944,101.567254892734,89.8317441249788,73.120032137647,77.0148893529847,78.4870649814574,82.5339266242449,76.7454493577506,79.2078122539105,81.0254711228556,84.7417670398177,95.3941861818155,94.0775693724701,83.0392786426,87.9846742814832,80.7220942578883,89.3157608842685,136.396575554118,89.5958060345914,77.9981926195323,73.263431182367,64.4126943828985,59.3581659188279
|short_description=p1@Uba1
|short_description=p1@Uba1
}}
}}

Latest revision as of 19:25, 1 October 2015

Short description:p1@Uba1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Uba1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -11bp_to_NM_001136085, uc009stm.2_5end
EntrezGene:Uba1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Uba1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7100.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5172.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6169.26
CD326+ enterocyte, pool1.CNhs13542.11848-124I3148.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I4179.82
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7103.41
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8103.49
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E964.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E787.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F289.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E670.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F161.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E473.10
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E861.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A164.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A379.78
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5104.93
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A263.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A461.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A657.72
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A359.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H240.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I945.97
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1113.27
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2104.84
GP2+ M cell, pool1.CNhs13228.11845-124H9152.75
GP2+ M cell, pool2.CNhs13231.11846-124I1130.95
GP2+ M cell, pool3.CNhs13240.11847-124I2121.31
Ileum epithelium, pool1.CNhs13199.10252-104B9134.16
Ileum epithelium, pool2.CNhs13232.10253-104C1121.73
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C898.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I364.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G667.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F549.97
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F663.34
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F753.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8127.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1104.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3110.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G995.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2122.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4106.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D858.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D963.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B384.80
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B764.16
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2184.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8165.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3164.29
Mouse Astrocytes, donor2.CNhs12078.11552-120C4128.51
Mouse Astrocytes, donor3.CNhs12107.11633-122C4148.07
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A277.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I990.67
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A170.92
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C198.79
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E189.97
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C597.46
Mouse Granule cells, donor1.CNhs12131.11713-123C3274.75
Mouse Granule cells, donor2.CNhs12357.11731-123E3260.79
Mouse Granule cells, donor3.CNhs12108.11636-122C7257.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6161.29
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1153.85
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C791.34
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E779.11
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D282.42
Mouse Microglia, donor1.CNhs12629.11718-123C8114.45
Mouse Microglia, donor2.CNhs12634.11736-123E886.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5206.86
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5230.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9224.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1186.82
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5197.01
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2235.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2274.02
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6221.53
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3136.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3120.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7117.97
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4267.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4296.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8214.10
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4136.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5136.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6126.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6165.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6172.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1225.73
Mouse Schwann, donor1.CNhs12507.11728-123D994.35
Mouse Schwann, donor2.CNhs12573.11746-123F9102.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G375.65
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F781.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C465.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C8114.42
Mouse hepatocyte, donor6.CNhs13090.11822-124F489.02
Mouse hepatocyte, donor8.CNhs13091.11824-124F679.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A768.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I778.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E370.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I872.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G691.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H179.56
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8114.66
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6127.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G199.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2103.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3111.72
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B671.94
accessory axillary lymph node, adult.CNhs10475.1063-29H934.70
adrenal gland, adult.CNhs10508.49-24D792.63
adrenal gland, embryo E14.CNhs11038.406-44C5113.46
adrenal gland, embryo E16.CNhs11004.1254-43D699.86
adrenal gland, embryo E17.CNhs11043.1263-45I1110.00
adrenal gland, embryo E18.CNhs11026.1262-18F597.37
adrenal gland, neonate N00.CNhs11191.1311-23C179.02
adrenal gland, neonate N25.CNhs11223.1377-27I3114.86
amnion, adult pregnant day17.5.CNhs10488.583-22A854.38
aorta, adult.CNhs10498.46-23H156.10
bone (os femoris), adult.CNhs10483.56-12G263.69
bone (os femoris), neonate N02.CNhs11227.1985-43F562.44
bone (os femoris), neonate N16.CNhs11225.1525-43A660.07
bone (os femoris), neonate N20.CNhs11195.1350-25C353.34
cecum, adult.CNhs10467.37-13H472.69
cerebellum, adult.CNhs10494.15-8B289.30
cerebellum, neonate N30.CNhs11135.1395-42I284.20
colon, adult.CNhs10468.36-18H791.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C748.17
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D164.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D458.58
corpora quadrigemina, adult.CNhs10501.16-22A496.91
corpus striatum, adult.CNhs10487.19-21D888.30
corpus striatum, neonate N00.CNhs11226.630-43F1179.18
cortex, adult.CNhs10473.12-14D595.60
cortex, neonate N30.CNhs11107.1392-42F287.97
diencephalon, adult.CNhs10482.20-12F2102.02
diencephalon, neonate N30.CNhs11201.1388-42B2103.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B166.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A258.84
epididymis, adult.CNhs10490.58-23B272.53
eyeball, adult.CNhs10484.31-12G465.24
eyeball, embryo E12.CNhs11016.345-16C671.96
eyeball, embryo E14.CNhs10521.399-16E295.41
eyeball, embryo E15.CNhs10593.426-16C992.19
eyeball, embryo E17.CNhs11023.1261-18D476.26
eyeball, neonate N00.CNhs11207.633-15C667.42
eyeball, neonate N01.CNhs11140.1532-43E768.28
eyeball, neonate N02.CNhs11205.1551-44G888.83
eyeball, neonate N16.CNhs11188.777-19A266.49
forelimb, embryo E11.CNhs10596.335-25E2110.59
forelimb, embryo E12.CNhs10600.359-14H289.07
forelimb, embryo E13.CNhs10589.384-1E291.85
forelimb, embryo E14.CNhs10577.413-26A885.27
forelimb, embryo E15.CNhs11007.437-20E766.45
forelimb, embryo E17.CNhs10598.1517-43C482.54
forelimb, embryo E18.CNhs11008.1520-43B562.15
gonad, embryo E13.CNhs11044.1564-45I682.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C861.79
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D259.70
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D552.29
heart, embryo E11.CNhs10586.331-24E9110.61
heart, embryo E12.CNhs11015.353-12F589.12
heart, embryo E13.CNhs11013.376-3I996.69
heart, embryo E14.CNhs10597.403-26D4111.03
heart, embryo E15.CNhs11017.431-16C878.51
heart, embryo E16.CNhs11021.457-17C685.93
heart, embryo E17.CNhs11025.479-18E587.90
heart, embryo E18.CNhs11030.1283-20G3108.65
heart, neonate N00.CNhs11213.639-21E388.86
heart, neonate N03.CNhs11221.1349-25I283.10
heart, neonate N10.CNhs11118.749-24G176.67
heart, neonate N16.CNhs11209.782-15G168.42
heart, neonate N20.CNhs11127.821-26I683.33
heart, neonate N25.CNhs11196.1351-25D375.96
heart, neonate N30.CNhs11202.1390-42D279.05
hippocampus, adult.CNhs10478.13-16E8100.94
hippocampus, neonate N00.CNhs11228.627-43G1135.11
intestinal mucosa, adult.CNhs10506.860-29I3107.72
intestine, adult.CNhs10496.178-9A392.56
intestine, embryo E12.CNhs11019.1251-16I569.96
intestine, embryo E13.CNhs11010.381-16D567.81
intestine, embryo E15.CNhs10602.976-16D869.33
intestine, embryo E16.CNhs10585.463-22H479.87
intestine, embryo E17.CNhs10582.482-18D382.06
intestine, embryo E18.CNhs10526.1289-20F781.99
intestine, neonate N00.CNhs11126.644-26D1106.77
intestine, neonate N01.CNhs11192.1322-23E976.59
intestine, neonate N06.CNhs11102.688-20B867.11
intestine, neonate N07.CNhs11095.720-20F269.63
intestine, neonate N10.CNhs11098.755-23A567.07
intestine, neonate N20.CNhs11187.827-18D190.78
intestine, neonate N25.CNhs11121.1352-25E374.35
intestine, neonate N30.CNhs11131.1384-42G178.46
kidney, embryo E14.CNhs10606.411-4I984.02
kidney, embryo E15.CNhs10997.434-16F875.63
kidney, embryo E16.CNhs10584.464-22A586.78
kidney, embryo E17.CNhs11028.483-18I259.87
kidney, embryo E18.CNhs11001.1288-20C767.88
kidney, neonate N00.CNhs11214.646-21G758.28
kidney, neonate N10.CNhs11206.758-6D569.50
kidney, neonate N20.CNhs11113.832-19I171.00
kidney, neonate N25.CNhs11122.1353-25F359.19
kidney, neonate N30.CNhs11203.1385-42H175.27
liver, adult pregnant day01.CNhs10466.508-5B275.00
liver, embryo E12.CNhs10601.355-15F878.75
liver, embryo E13.CNhs10524.378-3H678.23
liver, embryo E14.CNhs10594.409-16E190.39
liver, embryo E15.CNhs10520.433-16D771.81
liver, embryo E16.CNhs10523.462-17F577.90
liver, embryo E17.CNhs10510.481-18A376.39
liver, embryo E18.CNhs10579.499-43G485.45
liver, neonate N00.CNhs11117.641-24F448.64
liver, neonate N03.CNhs11123.1345-25G266.17
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H264.75
liver, neonate N10.CNhs11115.751-24B971.77
liver, neonate N20.CNhs11220.823-25A364.16
liver, neonate N25.CNhs11198.1368-26H179.65
liver, neonate N30.CNhs11106.1382-42D178.16
lung, adult.CNhs10474.28-22B154.69
lung, embryo E12.CNhs10522.354-16G279.59
lung, embryo E14.CNhs10604.404-26F894.52
lung, embryo E15.CNhs11020.432-17C568.58
lung, embryo E16.CNhs10998.458-17B672.28
lung, embryo E17.CNhs10605.480-44A662.31
lung, embryo E18.CNhs10583.1287-20I676.89
lung, neonate N00.CNhs11224.640-42C665.96
lung, neonate N06.CNhs11212.683-20E556.28
lung, neonate N07.CNhs11111.715-19A371.09
lung, neonate N10.CNhs11219.750-23E660.91
lung, neonate N20.CNhs11109.822-18A460.79
lung, neonate N25.CNhs11119.1359-25C762.86
lung, neonate N30.CNhs11133.1394-42H259.02
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1107.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A177.78
mammary gland, adult lactating day02.CNhs10480.595-22B681.63
mammary gland, adult pregnant day19.CNhs10476.588-5H272.57
medulla oblongata, adult.CNhs10477.17-12C288.78
medulla oblongata, neonate N30.CNhs11200.1396-42A396.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C766.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C273.22
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E191.50
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2100.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E397.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D794.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8100.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D988.32
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D490.27
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5102.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D699.61
olfactory brain, adult.CNhs10489.18-22I9111.82
ovary, adult.CNhs10507.91-2I780.48
ovary, embryo E18.CNhs11040.505-44H794.37
ovary, neonate N00.CNhs11217.1299-22I475.09
oviduct, adult pregnant day01.CNhs10500.988-6G671.27
pancreas, adult.CNhs10486.34-16E486.28
pancreas, embryo E14.CNhs11012.405-44F486.67
pancreas, embryo E15.CNhs11042.1556-45F296.44
pancreas, embryo E16.CNhs11003.460-26E5100.15
pancreas, embryo E17.CNhs10599.1558-45G3129.93
pancreas, embryo E18.CNhs10580.1535-43I7107.60
pancreas, neonate N00.CNhs11105.645-26G978.05
pancreas, neonate N01.CNhs11138.1531-43D772.34
pancreas, neonate N02.CNhs11139.1539-43D881.28
pancreas, neonate N16.CNhs11136.787-43B696.71
pancreas, neonate N25.CNhs11094.1555-45E282.23
pancreas, neonate N30.CNhs11182.1548-44H587.67
pituitary gland, adult.CNhs10493.21-1G887.49
pituitary gland, embryo E12.CNhs11018.346-16E684.63
pituitary gland, embryo E13.CNhs11009.370-44C794.30
pituitary gland, embryo E14.CNhs11037.398-44A597.31
pituitary gland, embryo E15.CNhs10592.427-16B990.62
pituitary gland, embryo E16.CNhs11036.449-43F6103.45
pituitary gland, embryo E17.CNhs11039.1265-44F588.36
pituitary gland, neonate N00.CNhs11190.1308-22E9121.18
placenta, adult pregnant day10.CNhs10472.539-13I778.15
placenta, adult pregnant day17.CNhs10464.577-18G349.36
prostate, adult.CNhs10470.859-1F886.23
skin, adult.CNhs10492.30-1C358.04
skin, neonate N00.CNhs11124.650-25G458.61
skin, neonate N03.CNhs11215.662-22H372.01
skin, neonate N06.CNhs11097.693-20I584.75
skin, neonate N10.CNhs11108.762-6C472.06
small intestine, neonate N16.CNhs11114.790-21I178.41
spinal cord, adult.CNhs10505.24-13C981.03
spleen, adult.CNhs10465.25-2G255.87
spleen, embryo E16.CNhs11035.461-43C181.52
spleen, embryo E18.CNhs11011.1271-21F257.60
spleen, neonate N10.CNhs11116.752-24D151.61
spleen, neonate N20.CNhs11112.824-19H155.91
spleen, neonate N25.CNhs11099.1354-25G353.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C653.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C953.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D355.56
stomach, adult.CNhs10503.33-1H660.14
stomach, embryo E12.CNhs10588.356-43E393.32
stomach, embryo E15.CNhs10603.1252-16G889.26
stomach, embryo E16.CNhs11022.459-17D469.34
stomach, embryo E17.CNhs11006.1035-18D571.09
stomach, embryo E18.CNhs10999.1286-20C675.34
stomach, neonate N03.CNhs11193.1340-24B879.17
stomach, neonate N07.CNhs11210.718-18A972.57
stomach, neonate N25.CNhs11104.1355-25E486.12
stomach, neonate N30.CNhs11134.1386-42I173.36
submandibular gland, adult.CNhs10469.59-29C178.29
testis, adult.CNhs10504.57-7G528.75
testis, embryo E13.CNhs11031.389-23F594.34
testis, embryo E15.CNhs11034.443-27C5102.25
testis, embryo E16.CNhs11033.470-26G597.03
testis, embryo E17.CNhs11029.486-18I5117.15
testis, embryo E18.CNhs11027.503-18G596.64
testis, neonate N00.CNhs11189.1300-22B779.22
testis, neonate N07.CNhs11222.726-26I473.83
testis, neonate N10.CNhs11204.763-44D967.95
testis, neonate N20.CNhs11110.839-18H330.68
testis, neonate N30.CNhs11130.1391-42E229.67
thymus, adult.CNhs10471.38-12B557.83
thymus, embryo E14.CNhs11041.402-44I487.98
thymus, embryo E15.CNhs11005.430-45I277.34
thymus, embryo E16.CNhs11002.456-26C567.95
thymus, embryo E17.CNhs10581.478-18C176.44
thymus, embryo E18.CNhs10595.1273-19G478.88
thymus, neonate N02.CNhs11181.1541-43F869.59
thymus, neonate N03.CNhs11137.2104-43C758.63
thymus, neonate N06.CNhs11197.681-26C459.87
thymus, neonate N07.CNhs11211.713-19D360.13
thymus, neonate N10.CNhs11194.748-24E459.59
thymus, neonate N20.CNhs11186.820-7A262.57
thymus, neonate N25.CNhs11125.1362-25G757.82
thymus, neonate N30.CNhs11132.1393-42G258.56
tongue, adult.CNhs10499.32-1B473.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H354.83
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F763.52
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G571.52
urinary bladder, adult.CNhs10481.879-12E463.37
uterus, adult pregnant day19.CNhs10497.590-15F570.01
uterus, adult.CNhs10509.92-27E582.42
vagina, adult.CNhs10502.89-27D597.11
vesicular gland, adult.CNhs10491.51-27F886.27
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1125.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2115.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3111.14
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D797.10
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4130.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5118.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A695.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A790.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A881.57
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9104.59
whole body, embryo E11.CNhs11014.324-5I8112.09
whole body, embryo E12.CNhs10587.857-27C972.22
whole body, embryo E13.CNhs10512.372-23H2103.29
whole body, embryo E14.5.CNhs10578.420-27D296.76
whole body, embryo E14.CNhs10519.395-14B184.68
whole body, embryo E16.CNhs10514.453-14F287.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G578.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G588.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G565.15
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G585.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G578.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G589.97
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G592.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G585.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G583.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G590.02
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G582.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G586.81
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G586.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5101.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G589.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G573.12
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G577.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G578.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G582.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G576.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G579.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G581.03
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G584.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G595.39
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G594.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G583.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G587.98
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G580.72
whole body, embryo E17.5.CNhs10513.490-9F989.32
whole body, embryo E17.CNhs10517.475-3I5136.40
whole body, embryo E18.CNhs10516.493-3B389.60
whole body, neonate N00.CNhs10525.657-19C278.00
whole body, neonate N01.CNhs10576.659-23C673.26
whole body, neonate N06.CNhs10515.692-21D164.41
whole body, neonate N10.CNhs10518.761-6B459.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.75e-1844
neurectodermal cell2.75e-1844
neural cell2.90e-1843
embryonic cell5.06e-1770
neuron6.80e-1633
neuronal stem cell6.80e-1633
neuroblast6.80e-1633
electrically signaling cell6.80e-1633
CNS neuron (sensu Vertebrata)2.67e-1523
neuroblast (sensu Vertebrata)2.67e-1523
electrically responsive cell9.80e-1439
electrically active cell9.80e-1439

Uber anatomy
Ontology termp-valuen
nervous system3.76e-2475
central nervous system1.12e-2373
regional part of nervous system3.97e-1854
neural tube2.37e-1652
neural rod2.37e-1652
future spinal cord2.37e-1652
neural keel2.37e-1652
ectoderm-derived structure4.29e-1695
ectoderm4.29e-1695
presumptive ectoderm4.29e-1695
gray matter4.56e-1634
structure with developmental contribution from neural crest2.94e-1592
anterior neural tube5.03e-1440
brain5.03e-1447
future brain5.03e-1447
regional part of forebrain7.31e-1439
forebrain7.31e-1439
future forebrain7.31e-1439
regional part of brain1.23e-1346
neurectoderm1.43e-1364
neural plate1.43e-1364
presumptive neural plate1.43e-1364
brain grey matter6.03e-1329
regional part of telencephalon6.03e-1329
telencephalon6.03e-1329
ecto-epithelium4.16e-1173
pre-chordal neural plate1.64e-1049
cerebral cortex4.69e-0921
cerebral hemisphere4.69e-0921
pallium4.69e-0921
regional part of cerebral cortex3.74e-0717
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