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FFCP PHASE1:Mm9::chr13:55589399..55589450,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr13:55589399..55589450,-
|DHSsupport=NA
|short_description=p1@Dbn1
|DPIdataset=NA
|description=CAGE_peak_1_at_Dbn1_5end
|association_with_transcript=0bp_to_ENSMUST00000021950,ENSMUST00000109925,ENSMUST00000135705,NM_001177371,NM_001177372,NM_019813,uc007qrc.2,uc007qrd.2,uc011yzu.1_5end
|EntrezGene=56320
|EntrezGene=56320
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q9QXS6,Q3TRK3
|UniProt=Q9QXS6,Q3TRK3
|association_with_transcript=0bp_to_ENSMUST00000021950,ENSMUST00000109925,ENSMUST00000135705,NM_001177371,NM_001177372,NM_019813,uc007qrc.2,uc007qrd.2,uc011yzu.1_5end
|cluster_id=chr13:55589399..55589450,-
|description=CAGE_peak_1_at_Dbn1_5end
|id=chr13:55589399..55589450,-
|ontology_enrichment_celltype=CL:0000055!8.54e-17!50;CL:0002319!1.43e-16!43;CL:0000221!2.44e-16!44;CL:0000133!2.44e-16!44;CL:0000393!4.62e-15!39;CL:0000211!4.62e-15!39;CL:0000540!2.65e-14!33;CL:0000047!2.65e-14!33;CL:0000031!2.65e-14!33;CL:0000404!2.65e-14!33;CL:0000117!5.67e-10!23;CL:0000337!5.67e-10!23
|ontology_enrichment_celltype_v019_2=CL:0002319,1.37e-16,43;CL:0000221,2.34e-16,44;CL:0000133,2.34e-16,44;CL:0000393,4.46e-15,39;CL:0000211,4.46e-15,39;CL:0000540,2.56e-14,33;CL:0000047,2.56e-14,33;CL:0000031,2.56e-14,33;CL:0000404,2.56e-14,33;CL:0000117,5.54e-10,23;CL:0000337,5.54e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.89e-27!75;UBERON:0001016!5.89e-27!75;UBERON:0001017!1.37e-26!73;UBERON:0005743!1.37e-26!73;UBERON:0004121!1.79e-23!102;UBERON:0000924!1.79e-23!102;UBERON:0006601!1.79e-23!102;UBERON:0002346!1.73e-20!71;UBERON:0003075!1.73e-20!71;UBERON:0007284!1.73e-20!71;UBERON:0001049!3.62e-18!52;UBERON:0005068!3.62e-18!52;UBERON:0006241!3.62e-18!52;UBERON:0007135!3.62e-18!52;UBERON:0003056!6.51e-18!49;UBERON:0000033!1.30e-16!63;UBERON:0003080!4.96e-16!40;UBERON:0002780!6.53e-16!39;UBERON:0001890!6.53e-16!39;UBERON:0006240!6.53e-16!39;UBERON:0000955!7.26e-16!50;UBERON:0006238!7.26e-16!50;UBERON:0002616!1.37e-15!49;UBERON:0002020!1.75e-15!34;UBERON:0002791!3.00e-13!29;UBERON:0003528!3.00e-13!29;UBERON:0001893!3.00e-13!29;UBERON:0000956!6.33e-11!21;UBERON:0001869!6.33e-11!21;UBERON:0000203!6.33e-11!21;UBERON:0000468!5.11e-09!333;UBERON:0002619!1.47e-08!17;UBERON:0000153!1.10e-07!94;UBERON:0000922!6.41e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.50e-27,75;UBERON:0001017,1.28e-26,73;UBERON:0004121,2.11e-24,95;UBERON:0000924,2.11e-24,95;UBERON:0006601,2.11e-24,95;UBERON:0002346,5.93e-22,64;UBERON:0003075,5.93e-22,64;UBERON:0007284,5.93e-22,64;UBERON:0010371,1.42e-18,73;UBERON:0001049,3.46e-18,52;UBERON:0005068,3.46e-18,52;UBERON:0006241,3.46e-18,52;UBERON:0007135,3.46e-18,52;UBERON:0003056,6.23e-18,49;UBERON:0000073,6.24e-18,54;UBERON:0010314,1.34e-17,92;UBERON:0000955,3.84e-16,47;UBERON:0006238,3.84e-16,47;UBERON:0003080,4.76e-16,40;UBERON:0002780,6.28e-16,39;UBERON:0001890,6.28e-16,39;UBERON:0006240,6.28e-16,39;UBERON:0002616,7.19e-16,46;UBERON:0002020,1.68e-15,34;UBERON:0003528,2.91e-13,29;UBERON:0002791,2.91e-13,29;UBERON:0001893,2.91e-13,29;UBERON:0000956,6.17e-11,21;UBERON:0001869,6.17e-11,21;UBERON:0000203,6.17e-11,21;UBERON:0002619,1.44e-08,17;UBERON:0000922,2.02e-07,320
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0637778,12.7322406518239,11.6367352183863,8.74197961037565,4.92801343031872,4.72606486958647,3.02899349844443,2.362411006305,2.72230699869469,1.55932609183604,1.25075394132428,1.40252282617883,7.9355634265324,19.5347638969177,7.98453323824334,21.6571155109661,35.1605061138587,41.29014459926,49.8172418006961,25.7242054894879,9.02829787263654,175.637823053908,158.812206594976,163.275221330228,125.968382657923,152.088319389083,152.58956727272,155.930197553547,143.652463828526,130.051871378467,165.683299760582,123.091794234834,211.084158029145,201.636388395632,107.939382378323,120.946794836346,92.6571282588071,85.3427434758202,93.1278458719802,114.247238614686,92.4871795055499,105.70086805423,87.3339960617533,78.846149289641,87.5864084898612,83.4537363925061,80.4936338268395,101.862322505528,81.6006002561472,93.1314135815473,93.7657121256111,89.4888748725934,86.0757659872787,92.7516778895078,92.5856673947933,91.0037708616247,87.6607337757769,98.0493934598061,81.2885408342934,90.7171480490357,86.9770521069495,93.4843942818492,90.4271148207673,76.1169740295622,81.4967784638181,85.8434418866079,237.569859618987,95.2101646372812,74.7751268088078,74.0285845106424,54.7066719416398,49.1559811515294
|phase1_expression=63.5790923006032,0,0.454999239389536,0,0,1.51091344720701,3.27057696833736,0,0.281577444303333,0.234064526321993,0,0,0,0,2.33176833270964,1.01237633694913,0,0.788655413395594,0.274228867211478,0.42438965179803,31.2959307755937,13.8014422169231,16.7167865048919,0.799962113967033,0.45881856213434,0.57423196411502,0,0.646413698057667,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,70.6281148842989,75.1203060336603,127.197899248045,218.287185073103,122.530137885811,87.8744730937887,70.3836234648906,72.3729799803124,139.439987434022,0,0,0,147.409656848598,86.5330988615045,77.3508138416163,456.628252160112,522.114096541496,487.416349296252,209.067076286654,111.161849513892,17.0980946283466,19.7773272513395,28.419204597844,137.216850617429,129.481568893364,453.434674624973,510.322446893791,507.934781663588,125.40078215327,133.846335816678,448.316325126732,470.505417228522,536.823771380252,66.0695285996332,63.4606070283383,61.4426133024974,489.034354903559,457.804168586458,401.103295328705,54.1615018062679,51.7741601229146,73.9543519239761,160.277950497675,158.459680729402,315.574261782234,74.060217079854,103.835323586723,17.971598299504,12.0459342777394,0.679971333707751,2.15881276655127,2.59910566979068,0.448026887097336,8.84799846830037,38.6876832252191,22.8611684050525,23.6737514921928,49.5768837613915,44.9142670950112,28.028576367731,78.2173373468664,28.1438353314578,31.1632634534371,25.7817466957539,6.05174562511018,3.88406825470758,15.4379824627418,96.9782976622699,66.0690087937346,52.3497178771253,42.8052299169448,44.213353883025,17.8446559688139,11.8653584512499,11.8571472674328,2.65383165584962,58.2360659810673,16.1214308476087,13.091631834651,13.0474232852686,30.4492028892009,22.8296910426666,5.10914110417183,1.67741174308288,1.19980546198682,1.90605340609597,87.3279427730116,148.687695916054,392.041578592137,146.881550562474,174.142226441955,84.9853102248601,116.326985619582,88.7020859136255,12.067476149179,3.53811861807145,5.6819301089348,173.450550469284,177.714326727075,193.20666528114,140.456890222886,128.384873898556,147.971346929001,136.523412683525,24.0594134787285,228.28650451588,188.727868007484,179.470146647228,138.970094359082,100.097009721215,67.2126681387781,52.2686626476176,88.769283001048,0.702213187313235,0.51469581422943,2.27330799516474,67.7301276191091,70.3578179943289,55.8192390529146,67.4722496417849,43.6816594479236,41.6521204795921,37.6704990495661,45.8747516393349,29.4248662765267,34.3930086319174,39.4001913789829,22.8614042919313,20.1755982646959,20.4181607220677,16.5073895075257,216.388357072487,379.306401230042,0.660837565967596,3.43785736662608,145.036010363959,117.279519289521,73.8410553375595,54.2528681236791,43.5860965935946,40.8985096142002,9.96511029243474,28.4929191672539,23.6255096272253,27.0580801975965,28.6597208065107,7.19055526923377,11.2391785934841,9.16049856970089,120.059781303301,94.4835199282457,90.1661885384643,67.8158921724896,63.228510816646,58.773817068087,55.7113892064707,27.6030976721856,21.351826986427,20.8541207027843,1.48226313543574,23.6920050116854,22.9974024282448,8.09503604585473,9.94014594803664,8.92355491083942,9.93040821947537,11.7955416354832,7.94462611197673,7.4131581560782,15.814502718009,13.0249331683976,15.2898459826135,7.57736633841335,8.07288360848605,2.8946611281802,4.80358294433172,133.02297106288,114.564378438744,78.0827394565865,57.499110830683,44.2216519646394,32.6119788013839,41.9537342894267,74.8766934504407,77.9555707563688,83.7137535451807,18.0249646187312,20.0314578964439,13.8863096238251,0,0,4.91764273019036,9.10591262805617,73.2110690344331,63.9975808793429,17.0492343191742,29.5390984829116,169.743422045946,159.299007673028,178.155149925025,160.826001022068,165.093817495054,149.181331725715,167.591630493406,192.304354505643,193.691011193797,103.786785204244,40.16904411394,115.564576780049,78.3486274490701,50.6458277525684,2.65490276679926,86.9154677434834,61.3716820638445,28.4793670431406,59.6509823619161,43.3483558600938,47.2923776497845,38.5345753246156,36.7192299736263,14.2216541071117,16.8669773719998,7.21948802737308,31.3204437293485,170.877978235713,211.113371933455,163.539157729105,142.75888808203,140.911365905636,116.171608545097,84.6412558538586,20.4164386015428,9.95610733059955,7.93902232997863,16.488625294148,41.3348932341518,32.2071019116352,31.1561817848186,30.6943482523265,16.6144076879015,73.7992702001828,3.07567585436135,79.6653310338039,33.7054039812875,7.34636982318295,3.96413260390973,7.32090154260872,1.35982743995084,2.37917468950219,2.07299960706636,38.1868247206045,167.499908601211,82.7510231206274,57.2428306355547,37.4268049865899,42.1439748030123,39.5152534907525,36.2022136076971,48.4248492670455,13.8688021422218,21.1255366449555,1.12738587736838,69.2261608183622,73.6290282534084,74.2803539474262,79.4332914388046,56.0934336629384,55.9794028340246,45.1809215408507,24.3273679067649,7.24752362478018,8.3528701814781,2.8441000856536,65.2775193234329,31.0187090637778,12.7322406518239,11.6367352183863,8.74197961037565,4.92801343031872,4.72606486958647,3.02899349844443,2.362411006305,2.72230699869469,1.55932609183604,1.25075394132428,1.40252282617883,7.9355634265324,19.5347638969177,7.98453323824334,21.6571155109661,35.1605061138587,41.29014459926,49.8172418006961,25.7242054894879,9.02829787263654,175.637823053908,158.812206594976,163.275221330228,125.968382657923,152.088319389083,152.58956727272,155.930197553547,143.652463828526,130.051871378467,165.683299760582,123.091794234834,211.084158029145,201.636388395632,107.939382378323,120.946794836346,92.6571282588071,85.3427434758202,93.1278458719802,114.247238614686,92.4871795055499,105.70086805423,87.3339960617533,78.846149289641,87.5864084898612,83.4537363925061,80.4936338268395,101.862322505528,81.6006002561472,93.1314135815473,93.7657121256111,89.4888748725934,86.0757659872787,92.7516778895078,92.5856673947933,91.0037708616247,87.6607337757769,98.0493934598061,81.2885408342934,90.7171480490357,86.9770521069495,93.4843942818492,90.4271148207673,76.1169740295622,81.4967784638181,85.8434418866079,237.569859618987,95.2101646372812,74.7751268088078,74.0285845106424,54.7066719416398,49.1559811515294
|short_description=p1@Dbn1
}}
}}

Latest revision as of 18:50, 1 October 2015

Short description:p1@Dbn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dbn1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000021950, ENSMUST00000109925, ENSMUST00000135705, NM_001177371, NM_001177372, NM_019813, uc007qrc.2, uc007qrd.2, uc011yzu.1_5end
EntrezGene:Dbn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dbn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G763.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.72
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D870.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D975.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3127.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7218.29
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2122.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B887.87
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C370.38
Mouse Astrocytes, donor2.CNhs12078.11552-120C472.37
Mouse Astrocytes, donor3.CNhs12107.11633-122C4139.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1147.41
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E186.53
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C577.35
Mouse Granule cells, donor1.CNhs12131.11713-123C3456.63
Mouse Granule cells, donor2.CNhs12357.11731-123E3522.11
Mouse Granule cells, donor3.CNhs12108.11636-122C7487.42
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6209.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1111.16
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C717.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E719.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D228.42
Mouse Microglia, donor1.CNhs12629.11718-123C8137.22
Mouse Microglia, donor2.CNhs12634.11736-123E8129.48
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5453.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5510.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9507.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1125.40
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5133.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2448.32
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2470.51
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6536.82
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D366.07
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F363.46
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D761.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4489.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4457.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8401.10
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E454.16
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E551.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I673.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6160.28
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6158.46
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1315.57
Mouse Schwann, donor1.CNhs12507.11728-123D974.06
Mouse Schwann, donor2.CNhs12573.11746-123F9103.84
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I738.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E322.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I823.67
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G649.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H144.91
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B678.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G128.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G231.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G325.78
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.05
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D715.44
adrenal gland, embryo E14.CNhs11038.406-44C596.98
adrenal gland, embryo E16.CNhs11004.1254-43D666.07
adrenal gland, embryo E17.CNhs11043.1263-45I152.35
adrenal gland, embryo E18.CNhs11026.1262-18F542.81
adrenal gland, neonate N00.CNhs11191.1311-23C144.21
adrenal gland, neonate N25.CNhs11223.1377-27I317.84
amnion, adult pregnant day17.5.CNhs10488.583-22A811.87
aorta, adult.CNhs10498.46-23H111.86
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F558.24
bone (os femoris), neonate N16.CNhs11225.1525-43A616.12
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B230.45
cerebellum, neonate N30.CNhs11135.1395-42I222.83
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A487.33
corpus striatum, adult.CNhs10487.19-21D8148.69
corpus striatum, neonate N00.CNhs11226.630-43F1392.04
cortex, adult.CNhs10473.12-14D5146.88
cortex, neonate N30.CNhs11107.1392-42F2174.14
diencephalon, adult.CNhs10482.20-12F284.99
diencephalon, neonate N30.CNhs11201.1388-42B2116.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B188.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.07
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C6173.45
eyeball, embryo E14.CNhs10521.399-16E2177.71
eyeball, embryo E15.CNhs10593.426-16C9193.21
eyeball, embryo E17.CNhs11023.1261-18D4140.46
eyeball, neonate N00.CNhs11207.633-15C6128.38
eyeball, neonate N01.CNhs11140.1532-43E7147.97
eyeball, neonate N02.CNhs11205.1551-44G8136.52
eyeball, neonate N16.CNhs11188.777-19A224.06
forelimb, embryo E11.CNhs10596.335-25E2228.29
forelimb, embryo E12.CNhs10600.359-14H2188.73
forelimb, embryo E13.CNhs10589.384-1E2179.47
forelimb, embryo E14.CNhs10577.413-26A8138.97
forelimb, embryo E15.CNhs11007.437-20E7100.10
forelimb, embryo E17.CNhs10598.1517-43C467.21
forelimb, embryo E18.CNhs11008.1520-43B552.27
gonad, embryo E13.CNhs11044.1564-45I688.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E967.73
heart, embryo E12.CNhs11015.353-12F570.36
heart, embryo E13.CNhs11013.376-3I955.82
heart, embryo E14.CNhs10597.403-26D467.47
heart, embryo E15.CNhs11017.431-16C843.68
heart, embryo E16.CNhs11021.457-17C641.65
heart, embryo E17.CNhs11025.479-18E537.67
heart, embryo E18.CNhs11030.1283-20G345.87
heart, neonate N00.CNhs11213.639-21E329.42
heart, neonate N03.CNhs11221.1349-25I234.39
heart, neonate N10.CNhs11118.749-24G139.40
heart, neonate N16.CNhs11209.782-15G122.86
heart, neonate N20.CNhs11127.821-26I620.18
heart, neonate N25.CNhs11196.1351-25D320.42
heart, neonate N30.CNhs11202.1390-42D216.51
hippocampus, adult.CNhs10478.13-16E8216.39
hippocampus, neonate N00.CNhs11228.627-43G1379.31
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I5145.04
intestine, embryo E13.CNhs11010.381-16D5117.28
intestine, embryo E15.CNhs10602.976-16D873.84
intestine, embryo E16.CNhs10585.463-22H454.25
intestine, embryo E17.CNhs10582.482-18D343.59
intestine, embryo E18.CNhs10526.1289-20F740.90
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E928.49
intestine, neonate N06.CNhs11102.688-20B823.63
intestine, neonate N07.CNhs11095.720-20F227.06
intestine, neonate N10.CNhs11098.755-23A528.66
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E311.24
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I9120.06
kidney, embryo E15.CNhs10997.434-16F894.48
kidney, embryo E16.CNhs10584.464-22A590.17
kidney, embryo E17.CNhs11028.483-18I267.82
kidney, embryo E18.CNhs11001.1288-20C763.23
kidney, neonate N00.CNhs11214.646-21G758.77
kidney, neonate N10.CNhs11206.758-6D555.71
kidney, neonate N20.CNhs11113.832-19I127.60
kidney, neonate N25.CNhs11122.1353-25F321.35
kidney, neonate N30.CNhs11203.1385-42H120.85
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F823.69
liver, embryo E13.CNhs10524.378-3H623.00
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D79.94
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A39.93
liver, embryo E18.CNhs10579.499-43G411.80
liver, neonate N00.CNhs11117.641-24F47.94
liver, neonate N03.CNhs11123.1345-25G27.41
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H213.02
liver, neonate N10.CNhs11115.751-24B915.29
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H18.07
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G2133.02
lung, embryo E14.CNhs10604.404-26F8114.56
lung, embryo E15.CNhs11020.432-17C578.08
lung, embryo E16.CNhs10998.458-17B657.50
lung, embryo E17.CNhs10605.480-44A644.22
lung, embryo E18.CNhs10583.1287-20I632.61
lung, neonate N00.CNhs11224.640-42C641.95
lung, neonate N06.CNhs11212.683-20E574.88
lung, neonate N07.CNhs11111.715-19A377.96
lung, neonate N10.CNhs11219.750-23E683.71
lung, neonate N20.CNhs11109.822-18A418.02
lung, neonate N25.CNhs11119.1359-25C720.03
lung, neonate N30.CNhs11133.1394-42H213.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C273.21
medulla oblongata, neonate N30.CNhs11200.1396-42A364.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C229.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1169.74
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2159.30
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3178.16
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7160.83
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8165.09
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9149.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4167.59
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5192.30
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6193.69
olfactory brain, adult.CNhs10489.18-22I9103.79
ovary, adult.CNhs10507.91-2I740.17
ovary, embryo E18.CNhs11040.505-44H7115.56
ovary, neonate N00.CNhs11217.1299-22I478.35
oviduct, adult pregnant day01.CNhs10500.988-6G650.65
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F486.92
pancreas, embryo E15.CNhs11042.1556-45F261.37
pancreas, embryo E16.CNhs11003.460-26E528.48
pancreas, embryo E17.CNhs10599.1558-45G359.65
pancreas, embryo E18.CNhs10580.1535-43I743.35
pancreas, neonate N00.CNhs11105.645-26G947.29
pancreas, neonate N01.CNhs11138.1531-43D738.53
pancreas, neonate N02.CNhs11139.1539-43D836.72
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G831.32
pituitary gland, embryo E12.CNhs11018.346-16E6170.88
pituitary gland, embryo E13.CNhs11009.370-44C7211.11
pituitary gland, embryo E14.CNhs11037.398-44A5163.54
pituitary gland, embryo E15.CNhs10592.427-16B9142.76
pituitary gland, embryo E16.CNhs11036.449-43F6140.91
pituitary gland, embryo E17.CNhs11039.1265-44F5116.17
pituitary gland, neonate N00.CNhs11190.1308-22E984.64
placenta, adult pregnant day10.CNhs10472.539-13I720.42
placenta, adult pregnant day17.CNhs10464.577-18G39.96
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C316.49
skin, neonate N00.CNhs11124.650-25G441.33
skin, neonate N03.CNhs11215.662-22H332.21
skin, neonate N06.CNhs11097.693-20I531.16
skin, neonate N10.CNhs11108.762-6C430.69
small intestine, neonate N16.CNhs11114.790-21I116.61
spinal cord, adult.CNhs10505.24-13C973.80
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C179.67
spleen, embryo E18.CNhs11011.1271-21F233.71
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H638.19
stomach, embryo E12.CNhs10588.356-43E3167.50
stomach, embryo E15.CNhs10603.1252-16G882.75
stomach, embryo E16.CNhs11022.459-17D457.24
stomach, embryo E17.CNhs11006.1035-18D537.43
stomach, embryo E18.CNhs10999.1286-20C642.14
stomach, neonate N03.CNhs11193.1340-24B839.52
stomach, neonate N07.CNhs11210.718-18A936.20
stomach, neonate N25.CNhs11104.1355-25E448.42
stomach, neonate N30.CNhs11134.1386-42I113.87
submandibular gland, adult.CNhs10469.59-29C121.13
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F569.23
testis, embryo E15.CNhs11034.443-27C573.63
testis, embryo E16.CNhs11033.470-26G574.28
testis, embryo E17.CNhs11029.486-18I579.43
testis, embryo E18.CNhs11027.503-18G556.09
testis, neonate N00.CNhs11189.1300-22B755.98
testis, neonate N07.CNhs11222.726-26I445.18
testis, neonate N10.CNhs11204.763-44D924.33
testis, neonate N20.CNhs11110.839-18H37.25
testis, neonate N30.CNhs11130.1391-42E28.35
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I465.28
thymus, embryo E15.CNhs11005.430-45I231.02
thymus, embryo E16.CNhs11002.456-26C512.73
thymus, embryo E17.CNhs10581.478-18C111.64
thymus, embryo E18.CNhs10595.1273-19G48.74
thymus, neonate N02.CNhs11181.1541-43F84.93
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.66
urinary bladder, adult.CNhs10481.879-12E435.16
uterus, adult pregnant day19.CNhs10497.590-15F541.29
uterus, adult.CNhs10509.92-27E549.82
vagina, adult.CNhs10502.89-27D525.72
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1175.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2158.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3163.28
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7125.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4152.09
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5152.59
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6155.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7143.65
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8130.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9165.68
whole body, embryo E11.CNhs11014.324-5I8123.09
whole body, embryo E12.CNhs10587.857-27C9211.08
whole body, embryo E13.CNhs10512.372-23H2201.64
whole body, embryo E14.5.CNhs10578.420-27D2107.94
whole body, embryo E14.CNhs10519.395-14B1120.95
whole body, embryo E16.CNhs10514.453-14F292.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G585.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G593.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5114.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G592.49
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5105.70
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G587.33
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G578.85
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G587.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G583.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G580.49
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5101.86
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G581.60
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G593.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G593.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G589.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G586.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G592.75
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G592.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G591.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G587.66
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G598.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G581.29
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G590.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G586.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G593.48
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G590.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G576.12
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G581.50
whole body, embryo E17.5.CNhs10513.490-9F985.84
whole body, embryo E17.CNhs10517.475-3I5237.57
whole body, embryo E18.CNhs10516.493-3B395.21
whole body, neonate N00.CNhs10525.657-19C274.78
whole body, neonate N01.CNhs10576.659-23C674.03
whole body, neonate N06.CNhs10515.692-21D154.71
whole body, neonate N10.CNhs10518.761-6B449.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.37e-1643
ectodermal cell2.34e-1644
neurectodermal cell2.34e-1644
electrically responsive cell4.46e-1539
electrically active cell4.46e-1539
neuron2.56e-1433
neuronal stem cell2.56e-1433
neuroblast2.56e-1433
electrically signaling cell2.56e-1433
CNS neuron (sensu Vertebrata)5.54e-1023
neuroblast (sensu Vertebrata)5.54e-1023

Uber anatomy
Ontology termp-valuen
nervous system5.50e-2775
central nervous system1.28e-2673
ectoderm-derived structure2.11e-2495
ectoderm2.11e-2495
presumptive ectoderm2.11e-2495
neurectoderm5.93e-2264
neural plate5.93e-2264
presumptive neural plate5.93e-2264
ecto-epithelium1.42e-1873
neural tube3.46e-1852
neural rod3.46e-1852
future spinal cord3.46e-1852
neural keel3.46e-1852
pre-chordal neural plate6.23e-1849
regional part of nervous system6.24e-1854
structure with developmental contribution from neural crest1.34e-1792
brain3.84e-1647
future brain3.84e-1647
anterior neural tube4.76e-1640
regional part of forebrain6.28e-1639
forebrain6.28e-1639
future forebrain6.28e-1639
regional part of brain7.19e-1646
gray matter1.68e-1534
brain grey matter2.91e-1329
regional part of telencephalon2.91e-1329
telencephalon2.91e-1329
cerebral cortex6.17e-1121
cerebral hemisphere6.17e-1121
pallium6.17e-1121
regional part of cerebral cortex1.44e-0817
embryo2.02e-07320
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