Personal tools

FFCP PHASE1:Mm9::chr1:90967014..90967032,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=98402
|EntrezGene=98402
|HGNC=
|HGNC=
|MCL_coexpression_id=3285
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000123745_5end
|association_with_transcript=0bp_to_ENSMUST00000123745_5end
|cluster_id=chr1:90967014..90967032,+
|description=CAGE_peak_1_at_Sh3bp4_5end
|description=CAGE_peak_1_at_Sh3bp4_5end
|id=chr1:90967014..90967032,+
|id=chr1:90967014..90967032,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005153!2.34e-08!17;UBERON:0002048!6.08e-08!14;UBERON:0000117!6.08e-08!14;UBERON:0000171!6.08e-08!14;UBERON:0000170!6.08e-08!14;UBERON:0005597!6.08e-08!14;UBERON:0000118!6.08e-08!14;UBERON:0000468!8.67e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0005157,2.50e-09,20;UBERON:0005153,2.31e-08,17;UBERON:0002048,6.01e-08,14;UBERON:0000117,6.01e-08,14;UBERON:0000171,6.01e-08,14;UBERON:0000170,6.01e-08,14;UBERON:0005597,6.01e-08,14;UBERON:0000118,6.01e-08,14
|phase1_expression=16.6554800988986,2.79180326111489,6.82498859084304,1.20985684522732,0.500895729946347,13.4303417529512,12.8486952327539,0.387369970324729,3.66050677594334,4.68129052643987,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,11.3107575900923,0.496454756004426,1.30599894569468,6.07971206614945,4.35877634027623,2.8711598205751,7.32295393470427,6.89507944594845,5.51067916423484,2.26827116783938,5.98672378769323,0,0,0,6.06588401477677,5.81821258754723,6.53341940039581,0.418531630736908,0.7813353445238,0,0,0,0,18.2550386064587,18.5519784131712,30.4687608588391,4.69434806608824,46.4393583090351,38.2253957957981,31.1087838518853,19.3181261843,35.9381410912429,0,1.45072428402269,0,3.34437266846731,4.58453503902011,7.21940929188419,9.71119012126069,9.52183762689659,11.4089652631112,13.8926258148344,11.5608323494448,6.74924787961049,8.89979726310277,3.5524005747305,36.251613372727,55.7116542716254,14.7239249478038,14.7156472781543,11.567872874326,21.9951257990929,24.7372765865807,9.92175473641128,9.29701068876893,14.7075005857603,12.1127469099328,9.44886301830389,8.90917892886212,11.2103344570665,10.2466160834699,9.89735404057844,7.53794097303729,6.19038871034848,10.3902808488231,13.8475435172624,15.6608848879013,9.31997229126503,1.06016670666458,1.20914496170857,36.2330610877097,0.860423876981386,0.679971333707751,0,0.649776417447669,0,5.47733238513832,37.1538103220166,33.7721805983729,33.213920003972,12.3942209403479,35.931413676009,78.9896243090602,56.8853362522665,9.30911476348221,8.86759529162845,8.08839112023653,5.25245846707676,6.99132285847364,10.6878340126674,8.84775166507293,9.13396434936424,5.76538743140146,6.48107354376277,8.46638691377075,4.27266410520897,7.91023896749996,12.5801440520323,5.30766331169925,11.1619126463712,7.06692859073259,9.69750506270444,5.59175283654366,3.51336956413857,4.1889341362691,7.40825460104915,1.07833612055328,1.19980546198682,0.635351135365324,7.63932260964596,6.40500843946077,12.4397808591736,8.51739168942155,10.4843337505436,11.8439185398949,11.8436122039463,20.8770695893148,9.57933673697716,7.83440551144392,26.7261156975822,15.7445735984871,14.7137346837423,17.4660265911189,20.7972648613287,22.5200812190895,22.2917873295639,24.8309570083281,12.6764651662118,15.3053274982318,15.8849107340968,16.3634545472472,12.9325482132269,17.5169767012127,15.3230953269753,25.311202778177,16.9179126795719,0,0.51469581422943,0.284163499395593,18.8484453007307,18.7620847984877,18.1862682075625,26.2786656499583,25.3825858954151,22.831532707332,23.0208605302904,28.16870714696,28.1404475104878,21.3927804887525,18.0584210487005,16.3758995282629,9.9415991449226,15.5880581856646,17.312628020088,10.9350773253346,13.4805042216863,0.330418782983798,1.85115396664481,18.3427895460301,19.2756437644164,14.5620231293965,9.27744213267376,10.0070119730192,11.7939888189787,7.59246498471219,7.74085087202851,8.04272668160862,7.16243299348143,10.1381325301942,8.08937467788799,4.75503709724327,3.18626037206988,17.6391147886366,17.9370164797274,28.1769339182701,18.7359221617689,20.1710586654331,23.0045489240245,24.7887225527089,25.0937251565324,22.2938193534752,27.5175675545615,1.77871576252289,2.8363667971736,3.34150291692445,0.674586337154561,1.01430060694251,1.4470629585145,2.5462585178142,1.43848068725405,0.324270453550071,2.47105271869273,2.87536413054709,1.86070473834252,2.18426371180192,1.26289438973556,1.97337154874103,0.482443521363367,34.1793401808219,14.0223644710159,26.4003261836082,19.3509397783714,20.8874320976767,29.3135950523178,36.1826334146741,34.1483883751148,35.9408128562115,32.1123799990724,31.8909537314974,28.3483534458227,26.2481172436161,26.6154267789981,1.50791283939272,3.80733978673097,41.7999632066181,39.4589547215767,8.99083303931635,9.96299336033727,4.09837363441689,7.82659874333556,19.8770178232242,17.5697434933487,26.2816545234015,7.16906393857656,11.1399337041197,15.0030561318081,23.4790206971439,23.0882127749936,29.6465833459893,21.5285282002611,23.8459343149891,12.2865266530406,13.5196176263468,25.570369060743,9.2921596837974,17.9657670754686,11.7906187216253,13.013750503157,15.651000322681,10.4527950300935,20.1574068671212,19.9943551212628,22.1028374598527,12.9575070753685,4.21674434299995,9.28219889233682,6.46835250932197,17.6459872150684,18.2395744133684,13.0745591369271,9.93105308396732,9.45354733290974,10.2020392773315,10.9607381681256,6.8054795338476,8.68511490541663,5.95426674748397,10.8824926941377,44.5641817680699,25.0298638451847,20.0545537925269,21.1741760671129,7.28702091574627,8.90041449650446,1.19609616558497,13.6215332855727,5.74103034846106,1.50694765603753,2.05041341581538,3.43167259809784,3.90950388985867,2.09927178485487,2.76399947608848,1.90934123603023,18.8219916180776,20.3319467126849,17.7128758947754,11.0816796887668,9.82631536857799,16.1837215661785,17.3572257023205,11.7790173892813,6.48074866458964,18.6401793926078,1.69107881605257,11.6622905914303,14.2294301793104,7.00024278038572,8.26622870257479,11.8269287843545,12.6745817737414,7.16124116641726,5.45268591013696,3.14059357073808,3.16833006883652,3.79213344753814,6.89265731986558,5.54639168690067,2.5984164595559,3.22248052201467,1.98681354781265,3.4856680360791,2.51072196196781,2.22126189885925,1.5241361331,2.52065462842101,3.31356794515158,3.17499077413087,1.63627663054197,6.57518112484113,17.7588762699252,21.2621840164457,11.4161539127573,11.3981860478992,8.82107634620555,15.3847364384503,10.2896821957952,43.6367730510766,10.7302850097243,16.1113832777512,13.1765968091061,14.6075204992134,6.85082519770642,6.0431511791176,14.1754725048679,6.75481804836331,10.4222754066367,7.24864436452548,16.7097629610524,9.97562183502578,12.1220860085435,10.2104821168684,13.4152424081909,14.7074806760011,14.8905307627082,17.512979865306,14.4413644316317,11.8767689528985,14.9552786935241,16.0332390178165,14.0462261204824,14.8538353579297,14.8757864595038,10.4784612082276,16.5714586101143,14.6611007552416,12.7746629249025,13.5423006523646,13.7147700954166,13.4881612681096,15.2599161566285,17.4415699958794,16.6573603335135,16.0767754994185,16.2805895856768,16.3103221091463,16.4322977753493,15.7119836064167,17.2020776280052,14.9726813210856,18.0061658994663,14.8739367538527,17.5545015992839,23.232383748229,20.1181183263051,16.545071161719,15.4943548975763,16.5443564339637,11.3615239454007
|phase1_expression=16.6554800988986,2.79180326111489,6.82498859084304,1.20985684522732,0.500895729946347,13.4303417529512,12.8486952327539,0.387369970324729,3.66050677594334,4.68129052643987,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,11.3107575900923,0.496454756004426,1.30599894569468,6.07971206614945,4.35877634027623,2.8711598205751,7.32295393470427,6.89507944594845,5.51067916423484,2.26827116783938,5.98672378769323,0,0,0,6.06588401477677,5.81821258754723,6.53341940039581,0.418531630736908,0.7813353445238,0,0,0,0,18.2550386064587,18.5519784131712,30.4687608588391,4.69434806608824,46.4393583090351,38.2253957957981,31.1087838518853,19.3181261843,35.9381410912429,0,1.45072428402269,0,3.34437266846731,4.58453503902011,7.21940929188419,9.71119012126069,9.52183762689659,11.4089652631112,13.8926258148344,11.5608323494448,6.74924787961049,8.89979726310277,3.5524005747305,36.251613372727,55.7116542716254,14.7239249478038,14.7156472781543,11.567872874326,21.9951257990929,24.7372765865807,9.92175473641128,9.29701068876893,14.7075005857603,12.1127469099328,9.44886301830389,8.90917892886212,11.2103344570665,10.2466160834699,9.89735404057844,7.53794097303729,6.19038871034848,10.3902808488231,13.8475435172624,15.6608848879013,9.31997229126503,1.06016670666458,1.20914496170857,36.2330610877097,0.860423876981386,0.679971333707751,0,0.649776417447669,0,5.47733238513832,37.1538103220166,33.7721805983729,33.213920003972,12.3942209403479,35.931413676009,78.9896243090602,56.8853362522665,9.30911476348221,8.86759529162845,8.08839112023653,5.25245846707676,6.99132285847364,10.6878340126674,8.84775166507293,9.13396434936424,5.76538743140146,6.48107354376277,8.46638691377075,4.27266410520897,7.91023896749996,12.5801440520323,5.30766331169925,11.1619126463712,7.06692859073259,9.69750506270444,5.59175283654366,3.51336956413857,4.1889341362691,7.40825460104915,1.07833612055328,1.19980546198682,0.635351135365324,7.63932260964596,6.40500843946077,12.4397808591736,8.51739168942155,10.4843337505436,11.8439185398949,11.8436122039463,20.8770695893148,9.57933673697716,7.83440551144392,26.7261156975822,15.7445735984871,14.7137346837423,17.4660265911189,20.7972648613287,22.5200812190895,22.2917873295639,24.8309570083281,12.6764651662118,15.3053274982318,15.8849107340968,16.3634545472472,12.9325482132269,17.5169767012127,15.3230953269753,25.311202778177,16.9179126795719,0,0.51469581422943,0.284163499395593,18.8484453007307,18.7620847984877,18.1862682075625,26.2786656499583,25.3825858954151,22.831532707332,23.0208605302904,28.16870714696,28.1404475104878,21.3927804887525,18.0584210487005,16.3758995282629,9.9415991449226,15.5880581856646,17.312628020088,10.9350773253346,13.4805042216863,0.330418782983798,1.85115396664481,18.3427895460301,19.2756437644164,14.5620231293965,9.27744213267376,10.0070119730192,11.7939888189787,7.59246498471219,7.74085087202851,8.04272668160862,7.16243299348143,10.1381325301942,8.08937467788799,4.75503709724327,3.18626037206988,17.6391147886366,17.9370164797274,28.1769339182701,18.7359221617689,20.1710586654331,23.0045489240245,24.7887225527089,25.0937251565324,22.2938193534752,27.5175675545615,1.77871576252289,2.8363667971736,3.34150291692445,0.674586337154561,1.01430060694251,1.4470629585145,2.5462585178142,1.43848068725405,0.324270453550071,2.47105271869273,2.87536413054709,1.86070473834252,2.18426371180192,1.26289438973556,1.97337154874103,0.482443521363367,34.1793401808219,14.0223644710159,26.4003261836082,19.3509397783714,20.8874320976767,29.3135950523178,36.1826334146741,34.1483883751148,35.9408128562115,32.1123799990724,31.8909537314974,28.3483534458227,26.2481172436161,26.6154267789981,1.50791283939272,3.80733978673097,41.7999632066181,39.4589547215767,8.99083303931635,9.96299336033727,4.09837363441689,7.82659874333556,19.8770178232242,17.5697434933487,26.2816545234015,7.16906393857656,11.1399337041197,15.0030561318081,23.4790206971439,23.0882127749936,29.6465833459893,21.5285282002611,23.8459343149891,12.2865266530406,13.5196176263468,25.570369060743,9.2921596837974,17.9657670754686,11.7906187216253,13.013750503157,15.651000322681,10.4527950300935,20.1574068671212,19.9943551212628,22.1028374598527,12.9575070753685,4.21674434299995,9.28219889233682,6.46835250932197,17.6459872150684,18.2395744133684,13.0745591369271,9.93105308396732,9.45354733290974,10.2020392773315,10.9607381681256,6.8054795338476,8.68511490541663,5.95426674748397,10.8824926941377,44.5641817680699,25.0298638451847,20.0545537925269,21.1741760671129,7.28702091574627,8.90041449650446,1.19609616558497,13.6215332855727,5.74103034846106,1.50694765603753,2.05041341581538,3.43167259809784,3.90950388985867,2.09927178485487,2.76399947608848,1.90934123603023,18.8219916180776,20.3319467126849,17.7128758947754,11.0816796887668,9.82631536857799,16.1837215661785,17.3572257023205,11.7790173892813,6.48074866458964,18.6401793926078,1.69107881605257,11.6622905914303,14.2294301793104,7.00024278038572,8.26622870257479,11.8269287843545,12.6745817737414,7.16124116641726,5.45268591013696,3.14059357073808,3.16833006883652,3.79213344753814,6.89265731986558,5.54639168690067,2.5984164595559,3.22248052201467,1.98681354781265,3.4856680360791,2.51072196196781,2.22126189885925,1.5241361331,2.52065462842101,3.31356794515158,3.17499077413087,1.63627663054197,6.57518112484113,17.7588762699252,21.2621840164457,11.4161539127573,11.3981860478992,8.82107634620555,15.3847364384503,10.2896821957952,43.6367730510766,10.7302850097243,16.1113832777512,13.1765968091061,14.6075204992134,6.85082519770642,6.0431511791176,14.1754725048679,6.75481804836331,10.4222754066367,7.24864436452548,16.7097629610524,9.97562183502578,12.1220860085435,10.2104821168684,13.4152424081909,14.7074806760011,14.8905307627082,17.512979865306,14.4413644316317,11.8767689528985,14.9552786935241,16.0332390178165,14.0462261204824,14.8538353579297,14.8757864595038,10.4784612082276,16.5714586101143,14.6611007552416,12.7746629249025,13.5423006523646,13.7147700954166,13.4881612681096,15.2599161566285,17.4415699958794,16.6573603335135,16.0767754994185,16.2805895856768,16.3103221091463,16.4322977753493,15.7119836064167,17.2020776280052,14.9726813210856,18.0061658994663,14.8739367538527,17.5545015992839,23.232383748229,20.1181183263051,16.545071161719,15.4943548975763,16.5443564339637,11.3615239454007
|short_description=p1@Sh3bp4
|short_description=p1@Sh3bp4
}}
}}

Latest revision as of 18:50, 1 October 2015

Short description:p1@Sh3bp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sh3bp4_5end
Coexpression cluster:MCL_coexpression_mm9:3285
Association with transcript: 0bp_to_ENSMUST00000123745_5end
EntrezGene:Sh3bp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sh3bp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.43
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.85
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B95.51
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B330.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C246.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B838.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C331.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C419.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C435.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C39.71
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.89
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C836.25
Mouse Microglia, donor2.CNhs12634.11736-123E855.71
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.32
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G336.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I737.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E333.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I833.21
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H135.93
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I878.99
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.25
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D710.69
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D69.13
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F56.48
adrenal gland, neonate N00.CNhs11191.1311-23C18.47
adrenal gland, neonate N25.CNhs11223.1377-27I34.27
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H112.58
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F511.16
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C39.70
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F112.44
cortex, adult.CNhs10473.12-14D58.52
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F211.84
diencephalon, neonate N30.CNhs11201.1388-42B211.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.88
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.58
epididymis, adult.CNhs10490.58-23B27.83
eyeball, adult.CNhs10484.31-12G426.73
eyeball, embryo E12.CNhs11016.345-16C615.74
eyeball, embryo E14.CNhs10521.399-16E214.71
eyeball, embryo E15.CNhs10593.426-16C917.47
eyeball, embryo E17.CNhs11023.1261-18D420.80
eyeball, neonate N00.CNhs11207.633-15C622.52
eyeball, neonate N01.CNhs11140.1532-43E722.29
eyeball, neonate N02.CNhs11205.1551-44G824.83
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H215.88
forelimb, embryo E13.CNhs10589.384-1E216.36
forelimb, embryo E14.CNhs10577.413-26A812.93
forelimb, embryo E15.CNhs11007.437-20E717.52
forelimb, embryo E17.CNhs10598.1517-43C415.32
forelimb, embryo E18.CNhs11008.1520-43B525.31
gonad, embryo E13.CNhs11044.1564-45I616.92
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E918.85
heart, embryo E12.CNhs11015.353-12F518.76
heart, embryo E13.CNhs11013.376-3I918.19
heart, embryo E14.CNhs10597.403-26D426.28
heart, embryo E15.CNhs11017.431-16C825.38
heart, embryo E16.CNhs11021.457-17C622.83
heart, embryo E17.CNhs11025.479-18E523.02
heart, embryo E18.CNhs11030.1283-20G328.17
heart, neonate N00.CNhs11213.639-21E328.14
heart, neonate N03.CNhs11221.1349-25I221.39
heart, neonate N10.CNhs11118.749-24G118.06
heart, neonate N16.CNhs11209.782-15G116.38
heart, neonate N20.CNhs11127.821-26I69.94
heart, neonate N25.CNhs11196.1351-25D315.59
heart, neonate N30.CNhs11202.1390-42D217.31
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G113.48
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I518.34
intestine, embryo E13.CNhs11010.381-16D519.28
intestine, embryo E15.CNhs10602.976-16D814.56
intestine, embryo E16.CNhs10585.463-22H49.28
intestine, embryo E17.CNhs10582.482-18D310.01
intestine, embryo E18.CNhs10526.1289-20F711.79
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B88.04
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A510.14
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I917.64
kidney, embryo E15.CNhs10997.434-16F817.94
kidney, embryo E16.CNhs10584.464-22A528.18
kidney, embryo E17.CNhs11028.483-18I218.74
kidney, embryo E18.CNhs11001.1288-20C720.17
kidney, neonate N00.CNhs11214.646-21G723.00
kidney, neonate N10.CNhs11206.758-6D524.79
kidney, neonate N20.CNhs11113.832-19I125.09
kidney, neonate N25.CNhs11122.1353-25F322.29
kidney, neonate N30.CNhs11203.1385-42H127.52
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B134.18
lung, embryo E12.CNhs10522.354-16G214.02
lung, embryo E14.CNhs10604.404-26F826.40
lung, embryo E15.CNhs11020.432-17C519.35
lung, embryo E16.CNhs10998.458-17B620.89
lung, embryo E17.CNhs10605.480-44A629.31
lung, embryo E18.CNhs10583.1287-20I636.18
lung, neonate N00.CNhs11224.640-42C634.15
lung, neonate N06.CNhs11212.683-20E535.94
lung, neonate N07.CNhs11111.715-19A332.11
lung, neonate N10.CNhs11219.750-23E631.89
lung, neonate N20.CNhs11109.822-18A428.35
lung, neonate N25.CNhs11119.1359-25C726.25
lung, neonate N30.CNhs11133.1394-42H226.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B641.80
mammary gland, adult pregnant day19.CNhs10476.588-5H239.46
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A39.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D629.65
olfactory brain, adult.CNhs10489.18-22I921.53
ovary, adult.CNhs10507.91-2I723.85
ovary, embryo E18.CNhs11040.505-44H712.29
ovary, neonate N00.CNhs11217.1299-22I413.52
oviduct, adult pregnant day01.CNhs10500.988-6G625.57
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F417.97
pancreas, embryo E15.CNhs11042.1556-45F211.79
pancreas, embryo E16.CNhs11003.460-26E513.01
pancreas, embryo E17.CNhs10599.1558-45G315.65
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G920.16
pancreas, neonate N01.CNhs11138.1531-43D719.99
pancreas, neonate N02.CNhs11139.1539-43D822.10
pancreas, neonate N16.CNhs11136.787-43B612.96
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E617.65
pituitary gland, embryo E13.CNhs11009.370-44C718.24
pituitary gland, embryo E14.CNhs11037.398-44A513.07
pituitary gland, embryo E15.CNhs10592.427-16B99.93
pituitary gland, embryo E16.CNhs11036.449-43F69.45
pituitary gland, embryo E17.CNhs11039.1265-44F510.20
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I76.81
placenta, adult pregnant day17.CNhs10464.577-18G38.69
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C310.88
skin, neonate N00.CNhs11124.650-25G444.56
skin, neonate N03.CNhs11215.662-22H325.03
skin, neonate N06.CNhs11097.693-20I520.05
skin, neonate N10.CNhs11108.762-6C421.17
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C113.62
spleen, embryo E18.CNhs11011.1271-21F25.74
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E318.82
stomach, embryo E15.CNhs10603.1252-16G820.33
stomach, embryo E16.CNhs11022.459-17D417.71
stomach, embryo E17.CNhs11006.1035-18D511.08
stomach, embryo E18.CNhs10999.1286-20C69.83
stomach, neonate N03.CNhs11193.1340-24B816.18
stomach, neonate N07.CNhs11210.718-18A917.36
stomach, neonate N25.CNhs11104.1355-25E411.78
stomach, neonate N30.CNhs11134.1386-42I16.48
submandibular gland, adult.CNhs10469.59-29C118.64
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F511.66
testis, embryo E15.CNhs11034.443-27C514.23
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I58.27
testis, embryo E18.CNhs11027.503-18G511.83
testis, neonate N00.CNhs11189.1300-22B712.67
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D95.45
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I46.89
thymus, embryo E15.CNhs11005.430-45I25.55
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A23.31
thymus, neonate N25.CNhs11125.1362-25G73.17
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F721.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.42
urinary bladder, adult.CNhs10481.879-12E411.40
uterus, adult pregnant day19.CNhs10497.590-15F58.82
uterus, adult.CNhs10509.92-27E515.38
vagina, adult.CNhs10502.89-27D510.29
vesicular gland, adult.CNhs10491.51-27F843.64
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I816.71
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H212.12
whole body, embryo E14.5.CNhs10578.420-27D210.21
whole body, embryo E14.CNhs10519.395-14B113.42
whole body, embryo E16.CNhs10514.453-14F214.71
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.49
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.87
whole body, embryo E17.5.CNhs10513.490-9F917.55
whole body, embryo E17.CNhs10517.475-3I523.23
whole body, embryo E18.CNhs10516.493-3B320.12
whole body, neonate N00.CNhs10525.657-19C216.55
whole body, neonate N01.CNhs10576.659-23C615.49
whole body, neonate N06.CNhs10515.692-21D116.54
whole body, neonate N10.CNhs10518.761-6B411.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial fold2.50e-0920
epithelial bud2.31e-0817
lung6.01e-0814
respiratory tube6.01e-0814
respiration organ6.01e-0814
pair of lungs6.01e-0814
lung primordium6.01e-0814
lung bud6.01e-0814
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:90967014..90967032,%2B&oldid=4317099"