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FFCP PHASE1:Mm9::chr8:13105431..13105484,-: Difference between revisions

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{{FFCP|EntrezGene=234069|HGNC=|MCL_coexpression_id=0|UniProt=Q8BFV2,E9Q5V9|association_with_transcript=0bp_to_ENSMUST00000164416,ENSMUST00000168164_5end|description=CAGE_peak_2_at_Pcid2_5end|id=chr8:13105431..13105484,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.73e-09!73;UBERON:0005743!8.73e-09!73;UBERON:0003056!2.71e-08!49;UBERON:0003080!5.95e-08!40;UBERON:0002780!7.26e-08!39;UBERON:0001890!7.26e-08!39;UBERON:0006240!7.26e-08!39;UBERON:0000073!7.82e-08!75;UBERON:0001016!7.82e-08!75;UBERON:0001049!1.55e-07!52;UBERON:0005068!1.55e-07!52;UBERON:0006241!1.55e-07!52;UBERON:0007135!1.55e-07!52;UBERON:0000955!1.70e-07!50;UBERON:0006238!1.70e-07!50;UBERON:0002616!1.71e-07!49;UBERON:0002346!2.11e-07!71;UBERON:0003075!2.11e-07!71;UBERON:0007284!2.11e-07!71;UBERON:0004121!2.20e-07!102;UBERON:0000924!2.20e-07!102;UBERON:0006601!2.20e-07!102;UBERON:0000956!2.39e-07!21;UBERON:0001869!2.39e-07!21;UBERON:0000203!2.39e-07!21;UBERON:0000033!2.42e-07!63;UBERON:0002791!5.84e-07!29;UBERON:0003528!5.84e-07!29;UBERON:0001893!5.84e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.71e-09,73;UBERON:0002616,1.55e-08,46;UBERON:0000955,1.59e-08,47;UBERON:0006238,1.59e-08,47;UBERON:0002346,1.67e-08,64;UBERON:0003075,1.67e-08,64;UBERON:0007284,1.67e-08,64;UBERON:0003056,2.71e-08,49;UBERON:0004121,3.55e-08,95;UBERON:0000924,3.55e-08,95;UBERON:0006601,3.55e-08,95;UBERON:0003080,5.94e-08,40;UBERON:0002780,7.24e-08,39;UBERON:0001890,7.24e-08,39;UBERON:0006240,7.24e-08,39;UBERON:0001016,7.80e-08,75;UBERON:0010371,1.20e-07,73;UBERON:0001049,1.55e-07,52;UBERON:0005068,1.55e-07,52;UBERON:0006241,1.55e-07,52;UBERON:0007135,1.55e-07,52;UBERON:0000956,2.38e-07,21;UBERON:0001869,2.38e-07,21;UBERON:0000203,2.38e-07,21;UBERON:0003528,5.83e-07,29;UBERON:0002791,5.83e-07,29;UBERON:0001893,5.83e-07,29|phase1_expression=2.7225304007815,1.74487703819681,5.45999087267443,4.53696316960245,3.50627010962443,1.6787927191189,2.33612640595526,3.09895976259783,2.111830832275,1.63845168425395,2.05461561870606,1.59544317990673,2.9104124088305,3.14713448708391,3.99731714178795,2.83465374345756,4.89693314689703,1.57731082679119,2.87940310572051,2.97072756258621,11.9911039113008,1.58865521921416,1.04479915655574,1.75991665072747,1.83527424853736,1.72269589234506,1.29228598847722,1.29282739611533,1.33016393619462,2.52030129759931,1.33038306393183,8.25539875497521,4.30545351309199,0,0.866554859253824,1.32987716286794,2.45003227514843,4.18531630736908,1.5626706890476,1.57057123192139,4.1176204162171,0.683045484958446,0.971020706062307,1.38486499773135,2.43304634926835,1.83546752161682,1.56478268869608,6.1047043786525,4.61340983742391,5.63846707315422,3.91961980551015,2.87505128729943,1.8456086666351,2.90144856804538,1.68046899571232,3.8588915405392,2.86533439938757,2.06268836910977,5.05791152148994,3.1739458756322,3.80298842103708,3.72728985276045,3.55717918444456,2.6996991518442,1.97773272513395,0.7104801149461,2.39680088414724,5.37905627450176,7.36196247390191,8.37036817656482,6.52007380189284,2.57085885963423,2.65042249141936,6.98197555525238,6.70918297127655,9.19218786610021,1.10115880999389,2.55374676170375,3.07213066512487,5.53922408466814,6.58711033937349,3.64639359389732,1.95428099300967,1.68828783009504,3.36156145108982,1.47314292736834,1.56608848879013,5.40558392893372,1.59025005999687,1.43585964202892,1.44932244350839,6.0229671388697,1.3599426674155,4.31762553310254,5.19821133958135,4.48026887097336,2.94933282276679,2.04516387093669,1.03914401841148,0.70667914902068,1.83096445709685,1.28326477414318,0,0,0.649473123033642,0.253359865475099,0,6.05174562511018,2.58937883647172,2.67195850316685,2.60227990149204,1.52232739156071,2.99800146432876,2.56228488939458,2.82212897125692,3.76999773989026,3.95511948374998,5.78397427679647,0.884610551949874,3.39710384889559,1.98757366614354,2.90925151881133,7.45567044872489,4.68449275218475,5.44561437714983,2.04365644166873,0.599075622529601,2.39961092397363,0.635351135365324,3.44518470631092,2.28750301409313,5.02617408451458,3.30266208365325,6.39288643325826,3.1168206683934,1.94689515681309,2.74966282395854,5.349499736234,3.0326731012041,2.10441855886474,3.3831315170303,3.44853156650209,3.42118046630164,2.41127708537144,3.60593445502038,3.71529788826064,4.40398105430725,4.13925393182425,3.44908788692548,2.64748512234947,5.63043597324636,5.91828477554452,3.89266148915837,5.2237824978325,3.08673204611915,3.18454826909589,0.702213187313235,0.51469581422943,0.852490498186778,3.31401236056803,3.28336483973535,2.70093092191522,5.91861838963026,5.1158700254325,2.31400669331067,2.32533944750408,2.41446061259657,1.98501082024188,0.16455984991348,3.77585167381919,2.83740833410495,1.75439984910399,1.09775057645525,3.08674763148855,3.57492912559016,5.24813523134351,3.63460661282178,3.17340679996253,2.55945900642281,1.62565670302307,3.60828891701861,3.02525286935014,2.66853652613844,3.0436100178009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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=234069
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q8BFV2,E9Q5V9
|association_with_transcript=0bp_to_ENSMUST00000164416,ENSMUST00000168164_5end
|cluster_id=chr8:13105431..13105484,-
|description=CAGE_peak_2_at_Pcid2_5end
|id=chr8:13105431..13105484,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.73e-09!73;UBERON:0005743!8.73e-09!73;UBERON:0003056!2.71e-08!49;UBERON:0003080!5.95e-08!40;UBERON:0002780!7.26e-08!39;UBERON:0001890!7.26e-08!39;UBERON:0006240!7.26e-08!39;UBERON:0000073!7.82e-08!75;UBERON:0001016!7.82e-08!75;UBERON:0001049!1.55e-07!52;UBERON:0005068!1.55e-07!52;UBERON:0006241!1.55e-07!52;UBERON:0007135!1.55e-07!52;UBERON:0000955!1.70e-07!50;UBERON:0006238!1.70e-07!50;UBERON:0002616!1.71e-07!49;UBERON:0002346!2.11e-07!71;UBERON:0003075!2.11e-07!71;UBERON:0007284!2.11e-07!71;UBERON:0004121!2.20e-07!102;UBERON:0000924!2.20e-07!102;UBERON:0006601!2.20e-07!102;UBERON:0000956!2.39e-07!21;UBERON:0001869!2.39e-07!21;UBERON:0000203!2.39e-07!21;UBERON:0000033!2.42e-07!63;UBERON:0002791!5.84e-07!29;UBERON:0003528!5.84e-07!29;UBERON:0001893!5.84e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.71e-09,73;UBERON:0002616,1.55e-08,46;UBERON:0000955,1.59e-08,47;UBERON:0006238,1.59e-08,47;UBERON:0002346,1.67e-08,64;UBERON:0003075,1.67e-08,64;UBERON:0007284,1.67e-08,64;UBERON:0003056,2.71e-08,49;UBERON:0004121,3.55e-08,95;UBERON:0000924,3.55e-08,95;UBERON:0006601,3.55e-08,95;UBERON:0003080,5.94e-08,40;UBERON:0002780,7.24e-08,39;UBERON:0001890,7.24e-08,39;UBERON:0006240,7.24e-08,39;UBERON:0001016,7.80e-08,75;UBERON:0010371,1.20e-07,73;UBERON:0001049,1.55e-07,52;UBERON:0005068,1.55e-07,52;UBERON:0006241,1.55e-07,52;UBERON:0007135,1.55e-07,52;UBERON:0000956,2.38e-07,21;UBERON:0001869,2.38e-07,21;UBERON:0000203,2.38e-07,21;UBERON:0003528,5.83e-07,29;UBERON:0002791,5.83e-07,29;UBERON:0001893,5.83e-07,29
|phase1_expression=2.7225304007815,1.74487703819681,5.45999087267443,4.53696316960245,3.50627010962443,1.6787927191189,2.33612640595526,3.09895976259783,2.111830832275,1.63845168425395,2.05461561870606,1.59544317990673,2.9104124088305,3.14713448708391,3.99731714178795,2.83465374345756,4.89693314689703,1.57731082679119,2.87940310572051,2.97072756258621,11.9911039113008,1.58865521921416,1.04479915655574,1.75991665072747,1.83527424853736,1.72269589234506,1.29228598847722,1.29282739611533,1.33016393619462,2.52030129759931,1.33038306393183,8.25539875497521,4.30545351309199,0,0.866554859253824,1.32987716286794,2.45003227514843,4.18531630736908,1.5626706890476,1.57057123192139,4.1176204162171,0.683045484958446,0.971020706062307,1.38486499773135,2.43304634926835,1.83546752161682,1.56478268869608,6.1047043786525,4.61340983742391,5.63846707315422,3.91961980551015,2.87505128729943,1.8456086666351,2.90144856804538,1.68046899571232,3.8588915405392,2.86533439938757,2.06268836910977,5.05791152148994,3.1739458756322,3.80298842103708,3.72728985276045,3.55717918444456,2.6996991518442,1.97773272513395,0.7104801149461,2.39680088414724,5.37905627450176,7.36196247390191,8.37036817656482,6.52007380189284,2.57085885963423,2.65042249141936,6.98197555525238,6.70918297127655,9.19218786610021,1.10115880999389,2.55374676170375,3.07213066512487,5.53922408466814,6.58711033937349,3.64639359389732,1.95428099300967,1.68828783009504,3.36156145108982,1.47314292736834,1.56608848879013,5.40558392893372,1.59025005999687,1.43585964202892,1.44932244350839,6.0229671388697,1.3599426674155,4.31762553310254,5.19821133958135,4.48026887097336,2.94933282276679,2.04516387093669,1.03914401841148,0.70667914902068,1.83096445709685,1.28326477414318,0,0,0.649473123033642,0.253359865475099,0,6.05174562511018,2.58937883647172,2.67195850316685,2.60227990149204,1.52232739156071,2.99800146432876,2.56228488939458,2.82212897125692,3.76999773989026,3.95511948374998,5.78397427679647,0.884610551949874,3.39710384889559,1.98757366614354,2.90925151881133,7.45567044872489,4.68449275218475,5.44561437714983,2.04365644166873,0.599075622529601,2.39961092397363,0.635351135365324,3.44518470631092,2.28750301409313,5.02617408451458,3.30266208365325,6.39288643325826,3.1168206683934,1.94689515681309,2.74966282395854,5.349499736234,3.0326731012041,2.10441855886474,3.3831315170303,3.44853156650209,3.42118046630164,2.41127708537144,3.60593445502038,3.71529788826064,4.40398105430725,4.13925393182425,3.44908788692548,2.64748512234947,5.63043597324636,5.91828477554452,3.89266148915837,5.2237824978325,3.08673204611915,3.18454826909589,0.702213187313235,0.51469581422943,0.852490498186778,3.31401236056803,3.28336483973535,2.70093092191522,5.91861838963026,5.1158700254325,2.31400669331067,2.32533944750408,2.41446061259657,1.98501082024188,0.16455984991348,3.77585167381919,2.83740833410495,1.75439984910399,1.09775057645525,3.08674763148855,3.57492912559016,5.24813523134351,3.63460661282178,3.17340679996253,2.55945900642281,1.62565670302307,3.60828891701861,3.02525286935014,2.66853652613844,3.04361001780095,2.37264530772256,1.4822905925161,3.01602250560323,1.98956472041151,2.53453313254856,1.79763881730844,2.37751854862164,3.18626037206988,1.70701110857774,3.08470984046268,3.38123207019241,3.46207257337034,3.87904974335251,3.08597607517402,3.16182685621286,1.47610147979602,2.04098346193787,2.46794327843601,3.26097889795864,3.17005700860579,3.14494392181125,3.59779379815766,2.02860121388503,1.92941727801933,2.03700681425136,3.16465751195892,2.10775794807546,2.19649130550465,5.75072826109418,2.23284568601102,2.80833905803104,3.03094653536534,3.40855085691633,5.30687873499704,2.40179147216586,3.7898282354097,2.11854469374634,2.20668611507745,3.28566347603903,3.35012514883632,3.57065461329021,2.53673742215138,2.83743259391144,4.20782910332672,3.18909537314974,4.7520361267564,3.9717545829156,4.19482269886384,1.50791283939272,0.54390568381871,3.44234991113325,3.03530420935206,2.24770825982909,4.92289083687253,1.3114795630134,3.28212205365685,4.41711507182759,2.73307121007647,4.95473814785438,1.91175038362042,4.45597348164788,3.67999490025482,6.07216052512342,3.79932615284705,5.13874111330481,3.21321316421807,4.82596289708113,3.20518086601059,2.44330439030364,2.96946221350564,1.32745138339963,2.42780636154981,2.41858845571801,1.50884063804718,3.2483208216885,2.45948118355142,2.84271122485043,3.27180356529755,0.356497378384721,3.47640433729398,1.05418608574999,2.06271086496374,2.38307724027652,3.42116078659489,4.39819524861365,5.78709994585299,3.01478397191865,5.17269571046005,5.26556865926787,5.78483403317739,1.87737366450968,1.90648863777438,2.8668691747145,4.28704257647848,2.09903754704677,2.35220407219808,2.74556391207214,3.77524069413641,1.45740418314925,4.07935664423121,3.2465467351592,3.09580301944834,4.07427960213366,3.39063222608444,3.00727300986255,4.34678529092393,0.679913719975421,1.81936888020755,1.24379976423981,1.90934123603023,3.47969592939249,3.04979200690273,3.24016022465404,2.50905955217362,1.9652630737156,2.56242258131159,3.14083131756277,4.4498510137285,3.49960427887841,3.10669656543463,76.6622396610499,4.48549638131936,2.64733584731356,2.91676782516071,3.22899558694328,3.04121025883401,4.10750335260139,3.1249052362548,3.8797957437513,35.2712816405969,47.5249510325478,4.4241556887945,2.43270258348197,1.74608627180206,1.55904987573354,2.68540043501222,4.37098980518783,2.40390899039938,2.80610101631697,3.93769154797776,3.35309949281999,3.52891647978942,3.41102582589133,3.75226182397285,4.55819918508119,3.17422537061296,1.33191572024439,2.15313255862742,1.34307693091263,5.02292944483695,3.37828455812128,2.93042598827624,3.64426244434412,8.52672576860118,3.3885110557024,4.60325236507177,6.30185064783336,4.46818274093588,4.11049511862385,3.7769694869485,1.35004500046361,4.95353323546643,4.07828168085784,3.10656187051092,3.42498247027783,5.58634822761443,4.26834014385335,3.16038732188782,5.24032906569956,3.67687016900028,2.66696073361938,2.26638562962784,3.53011130550997,3.28506375292937,5.57654459758527,2.64076877940507,3.37109426891577,2.04880487695582,2.29741875822453,2.38146845641537,2.31768651889711,2.31491064556446,1.64834360321323,3.53277408322554,1.71434626192708,2.48466128623072,1.90748951957857,2.90692833264657,3.19971893412124,3.13074049199203,2.56099162021882,1.57841826862706,3.53090695999241,4.48913817326191,2.72860541685601,2.36410757701352,3.27384834535751,4.02835787083512,3.08650577569826,3.99696924700713,3.74290573512653,3.00819475667618,3.63447830930802,2.42650561031467,2.08681052058379
|short_description=p2@Pcid2
}}

Latest revision as of 18:36, 1 October 2015

Short description:p2@Pcid2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pcid2_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000164416, ENSMUST00000168164_5end
EntrezGene:Pcid2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pcid2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.60
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.10
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.05
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H15.78
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F15.03
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G84.40
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E25.63
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G73.09
kidney, neonate N10.CNhs11206.758-6D53.16
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I74.83
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H32.35
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A93.14
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I13.50
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G576.66
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D93.88
testis, neonate N20.CNhs11110.839-18H335.27
testis, neonate N30.CNhs11130.1391-42E247.52
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G44.37
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D33.35
thymus, neonate N10.CNhs11194.748-24E43.53
thymus, neonate N20.CNhs11186.820-7A23.41
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F88.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I83.42
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system8.71e-0973
regional part of brain1.55e-0846
brain1.59e-0847
future brain1.59e-0847
neurectoderm1.67e-0864
neural plate1.67e-0864
presumptive neural plate1.67e-0864
pre-chordal neural plate2.71e-0849
ectoderm-derived structure3.55e-0895
ectoderm3.55e-0895
presumptive ectoderm3.55e-0895
anterior neural tube5.94e-0840
regional part of forebrain7.24e-0839
forebrain7.24e-0839
future forebrain7.24e-0839
nervous system7.80e-0875
ecto-epithelium1.20e-0773
neural tube1.55e-0752
neural rod1.55e-0752
future spinal cord1.55e-0752
neural keel1.55e-0752
cerebral cortex2.38e-0721
cerebral hemisphere2.38e-0721
pallium2.38e-0721
brain grey matter5.83e-0729
regional part of telencephalon5.83e-0729
telencephalon5.83e-0729
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