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FFCP PHASE1:Mm9::chr6:79968951..79968991,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=243499
|EntrezGene=243499
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q80XG9
|UniProt=Q80XG9
|association_with_transcript=-13bp_to_ENSMUST00000126399_5end
|association_with_transcript=-13bp_to_ENSMUST00000126399_5end
|cluster_id=chr6:79968951..79968991,+
|description=CAGE_peak_1_at_Lrrtm4_5end
|description=CAGE_peak_1_at_Lrrtm4_5end
|id=chr6:79968951..79968991,+
|id=chr6:79968951..79968991,+
|ontology_enrichment_celltype=CL:0000540!2.18e-15!33;CL:0000047!2.18e-15!33;CL:0000031!2.18e-15!33;CL:0000404!2.18e-15!33;CL:0000117!3.06e-13!23;CL:0000337!3.06e-13!23;CL:0000393!1.64e-10!39;CL:0000211!1.64e-10!39;CL:0000221!1.90e-10!44;CL:0000133!1.90e-10!44;CL:0002319!6.85e-10!43
|ontology_enrichment_celltype=CL:0000540!2.18e-15!33;CL:0000047!2.18e-15!33;CL:0000031!2.18e-15!33;CL:0000404!2.18e-15!33;CL:0000117!3.06e-13!23;CL:0000337!3.06e-13!23;CL:0000393!1.64e-10!39;CL:0000211!1.64e-10!39;CL:0000221!1.90e-10!44;CL:0000133!1.90e-10!44;CL:0002319!6.85e-10!43
|ontology_enrichment_celltype_v019_2=CL:0000540,7.17e-18,33;CL:0000047,7.17e-18,33;CL:0000031,7.17e-18,33;CL:0000404,7.17e-18,33;CL:0000117,1.71e-16,23;CL:0000337,1.71e-16,23;CL:0000393,2.56e-13,39;CL:0000211,2.56e-13,39;CL:0000221,1.86e-12,44;CL:0000133,1.86e-12,44;CL:0002319,9.36e-12,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.23e-28!102;UBERON:0000924!3.23e-28!102;UBERON:0006601!3.23e-28!102;UBERON:0000073!5.13e-28!75;UBERON:0001016!5.13e-28!75;UBERON:0001017!9.59e-28!73;UBERON:0005743!9.59e-28!73;UBERON:0002346!1.41e-26!71;UBERON:0003075!1.41e-26!71;UBERON:0007284!1.41e-26!71;UBERON:0000033!5.81e-25!63;UBERON:0001049!2.95e-23!52;UBERON:0005068!2.95e-23!52;UBERON:0006241!2.95e-23!52;UBERON:0007135!2.95e-23!52;UBERON:0000955!3.19e-22!50;UBERON:0006238!3.19e-22!50;UBERON:0002616!1.73e-21!49;UBERON:0003056!1.73e-21!49;UBERON:0003080!2.98e-19!40;UBERON:0002780!1.50e-18!39;UBERON:0001890!1.50e-18!39;UBERON:0006240!1.50e-18!39;UBERON:0002020!1.83e-18!34;UBERON:0002791!1.74e-15!29;UBERON:0003528!1.74e-15!29;UBERON:0001893!1.74e-15!29;UBERON:0000153!6.81e-12!94;UBERON:0007811!1.04e-11!86;UBERON:0000956!8.54e-11!21;UBERON:0001869!8.54e-11!21;UBERON:0000203!8.54e-11!21;UBERON:0002021!6.46e-09!10;UBERON:0000411!6.46e-09!10;UBERON:0001950!6.46e-09!10;UBERON:0002619!1.37e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.51e-33,73;UBERON:0001016,5.55e-33,75;UBERON:0002346,2.07e-32,64;UBERON:0003075,2.07e-32,64;UBERON:0007284,2.07e-32,64;UBERON:0000073,2.02e-30,54;UBERON:0004121,3.66e-30,95;UBERON:0000924,3.66e-30,95;UBERON:0006601,3.66e-30,95;UBERON:0010371,9.05e-29,73;UBERON:0001049,1.23e-28,52;UBERON:0005068,1.23e-28,52;UBERON:0006241,1.23e-28,52;UBERON:0007135,1.23e-28,52;UBERON:0003056,5.60e-25,49;UBERON:0000955,8.48e-25,47;UBERON:0006238,8.48e-25,47;UBERON:0002616,6.98e-24,46;UBERON:0002020,7.61e-24,34;UBERON:0003080,6.93e-23,40;UBERON:0002780,5.33e-22,39;UBERON:0001890,5.33e-22,39;UBERON:0006240,5.33e-22,39;UBERON:0003528,5.14e-20,29;UBERON:0002791,5.14e-20,29;UBERON:0001893,5.14e-20,29;UBERON:0010314,1.49e-19,92;UBERON:0000956,5.53e-14,21;UBERON:0001869,5.53e-14,21;UBERON:0000203,5.53e-14,21;UBERON:0002619,3.77e-11,17;UBERON:0002021,5.77e-11,10;UBERON:0000411,5.77e-11,10;UBERON:0001950,5.77e-11,10;UBERON:0002420,3.07e-07,8;UBERON:0007245,3.07e-07,8;UBERON:0010009,3.07e-07,8;UBERON:0010011,3.07e-07,8;UBERON:0000454,3.07e-07,8
|phase1_expression=26.9050063136054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,6.87875966922632,13.7537654610729,5.70448263155561,0,0,0,0,0.7104801149461,0,0,9.64313394468842,8.37036817656482,7.15104868594699,7.14127461009509,9.718215801871,4.40966877173835,2.01275489138296,3.67687514644008,15.4162233399144,15.0671058940522,15.2070467923681,7.78129097608144,10.6125666578795,8.85552729946492,9.77140496504833,19.6966913511088,15.8910177687883,17.6777151284201,20.3591503542717,10.0655700745662,1.28734528666413,0.982430281388212,0,0,0,0,0,0,0.561777680527007,0,0,0,23.802537942259,0,0,0,0,0,0,0.79928715803342,0,1.33597925158342,0.173485326766136,0.304465478312141,1.15307748628029,0.904335843315735,0.587943535678524,0.628332956648377,0,0,0,0.323533699894818,0,0,0,4.9772735491963,4.60782754989601,0,0,0,0,26.0635712564392,30.652540388848,11.8115090986093,45.889620530761,42.7044813741652,20.778804455956,24.6606719862992,0.509196819251581,0,0,3.57751155007006,0.650602214813519,2.5289231487682,1.80062129805349,2.26057226753573,2.31324097114515,2.17793324484245,2.15513966487376,10.3481348295606,0,1.13463648100692,1.05570674498369,1.09597866213787,1.11218899690239,1.74126083261083,1.64625709126355,1.19420560091096,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,42.2682796613896,11.8340304236177,0,0,0.853153002140936,1.39342003116263,0.38660238396628,0.403367049246685,0.22237804384487,0.380451252225118,0,0.494096864172033,0,0.596869416123452,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.456994050438915,0,0.610953983535943,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.788175720530955,0.8858587585951,0.159454768657487,0,0,0,0,0,0,0,11.0779907091576,13.4793439581034,0,0,2.2085575359138,2.34263246577983,4.95473814785438,0.238968797952552,0.668396022247182,1.41538265394416,1.61924280669958,4.67609372658099,6.7198922250909,32.7747742750243,0.709700426041343,1.78065603667255,0.488660878060728,0.989820737835213,0,0.485561272309963,0,0.377210159511796,0,0,0,0,0.356497378384721,0,1.05418608574999,0,2.04263763452273,0.900305470156551,2.45781499187234,3.85806663056866,6.91626911204867,2.67553226403106,2.13913726782757,0.913394847343798,0,0,0,0.16488625294148,0.645857706783622,0.361877549568935,0.238744688006273,0.492422699235184,0,10.7546675166096,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,0.86404272657441,0.418176592028937,1.09181281873089,0.674321731924103,0.743881101528023,0.26175594198403,0.259229946583586,0,0,0.598066184175915,0.330916980914195,1.55560950675238,3.61647505737647,2.87225413334323,2.34714477291508,0.2604087696879,0,0,0,0,0,0.308132871494482,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,57.0399361043237,60.3026059824402,49.2690141557881,54.1337524382616,54.8066015816514,52.1221789198893,53.3267775183127,61.243683638494,61.6273676218518,50.2227502399265,0.518936737920883,3.19219898720825,1.70733605754134,2.67417388775123,0.838452650511929,1.2869045591501,4.00044110042907,2.88449080134452,3.53011130550997,4.80124702351215,2.5347929989024,3.77252682772152,2.99652823903624,2.81710670581425,3.0440798546475,4.28664322154766,3.24476112645595,3.47236596834669,4.53294490883637,2.64958056241915,2.05721551431249,2.8396128985494,2.62279808942053,3.0522747492789,2.82328141245992,2.62305284464197,4.024415403201,2.10455769150274,2.58027816307137,2.24456908663095,3.32178050747688,2.26560309463796,2.45538625901814,3.25367366490529,1.54325288784913,3.49734809113124,3.97683734357194,3.65280791882107,0.956441660344217,2.64709702943419,2.08681052058379
|phase1_expression=26.9050063136054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,6.87875966922632,13.7537654610729,5.70448263155561,0,0,0,0,0.7104801149461,0,0,9.64313394468842,8.37036817656482,7.15104868594699,7.14127461009509,9.718215801871,4.40966877173835,2.01275489138296,3.67687514644008,15.4162233399144,15.0671058940522,15.2070467923681,7.78129097608144,10.6125666578795,8.85552729946492,9.77140496504833,19.6966913511088,15.8910177687883,17.6777151284201,20.3591503542717,10.0655700745662,1.28734528666413,0.982430281388212,0,0,0,0,0,0,0.561777680527007,0,0,0,23.802537942259,0,0,0,0,0,0,0.79928715803342,0,1.33597925158342,0.173485326766136,0.304465478312141,1.15307748628029,0.904335843315735,0.587943535678524,0.628332956648377,0,0,0,0.323533699894818,0,0,0,4.9772735491963,4.60782754989601,0,0,0,0,26.0635712564392,30.652540388848,11.8115090986093,45.889620530761,42.7044813741652,20.778804455956,24.6606719862992,0.509196819251581,0,0,3.57751155007006,0.650602214813519,2.5289231487682,1.80062129805349,2.26057226753573,2.31324097114515,2.17793324484245,2.15513966487376,10.3481348295606,0,1.13463648100692,1.05570674498369,1.09597866213787,1.11218899690239,1.74126083261083,1.64625709126355,1.19420560091096,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,42.2682796613896,11.8340304236177,0,0,0.853153002140936,1.39342003116263,0.38660238396628,0.403367049246685,0.22237804384487,0.380451252225118,0,0.494096864172033,0,0.596869416123452,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.456994050438915,0,0.610953983535943,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.788175720530955,0.8858587585951,0.159454768657487,0,0,0,0,0,0,0,11.0779907091576,13.4793439581034,0,0,2.2085575359138,2.34263246577983,4.95473814785438,0.238968797952552,0.668396022247182,1.41538265394416,1.61924280669958,4.67609372658099,6.7198922250909,32.7747742750243,0.709700426041343,1.78065603667255,0.488660878060728,0.989820737835213,0,0.485561272309963,0,0.377210159511796,0,0,0,0,0.356497378384721,0,1.05418608574999,0,2.04263763452273,0.900305470156551,2.45781499187234,3.85806663056866,6.91626911204867,2.67553226403106,2.13913726782757,0.913394847343798,0,0,0,0.16488625294148,0.645857706783622,0.361877549568935,0.238744688006273,0.492422699235184,0,10.7546675166096,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,0.86404272657441,0.418176592028937,1.09181281873089,0.674321731924103,0.743881101528023,0.26175594198403,0.259229946583586,0,0,0.598066184175915,0.330916980914195,1.55560950675238,3.61647505737647,2.87225413334323,2.34714477291508,0.2604087696879,0,0,0,0,0,0.308132871494482,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,57.0399361043237,60.3026059824402,49.2690141557881,54.1337524382616,54.8066015816514,52.1221789198893,53.3267775183127,61.243683638494,61.6273676218518,50.2227502399265,0.518936737920883,3.19219898720825,1.70733605754134,2.67417388775123,0.838452650511929,1.2869045591501,4.00044110042907,2.88449080134452,3.53011130550997,4.80124702351215,2.5347929989024,3.77252682772152,2.99652823903624,2.81710670581425,3.0440798546475,4.28664322154766,3.24476112645595,3.47236596834669,4.53294490883637,2.64958056241915,2.05721551431249,2.8396128985494,2.62279808942053,3.0522747492789,2.82328141245992,2.62305284464197,4.024415403201,2.10455769150274,2.58027816307137,2.24456908663095,3.32178050747688,2.26560309463796,2.45538625901814,3.25367366490529,1.54325288784913,3.49734809113124,3.97683734357194,3.65280791882107,0.956441660344217,2.64709702943419,2.08681052058379
|short_description=p1@Lrrtm4
|short_description=p1@Lrrtm4
}}
}}

Latest revision as of 18:26, 1 October 2015

Short description:p1@Lrrtm4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrtm4_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -13bp_to_ENSMUST00000126399_5end
EntrezGene:Lrrtm4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrrtm4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.88
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.07
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A426.06
corpus striatum, adult.CNhs10487.19-21D830.65
corpus striatum, neonate N00.CNhs11226.630-43F111.81
cortex, adult.CNhs10473.12-14D545.89
cortex, neonate N30.CNhs11107.1392-42F242.70
diencephalon, adult.CNhs10482.20-12F220.78
diencephalon, neonate N30.CNhs11201.1388-42B224.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E842.27
hippocampus, neonate N00.CNhs11228.627-43G111.83
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.08
medulla oblongata, neonate N30.CNhs11200.1396-42A313.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I932.77
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A157.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A260.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A349.27
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.13
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A454.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A552.12
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A653.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A761.24
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A861.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A950.22
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.17e-1833
neuronal stem cell7.17e-1833
neuroblast7.17e-1833
electrically signaling cell7.17e-1833
CNS neuron (sensu Vertebrata)1.71e-1623
neuroblast (sensu Vertebrata)1.71e-1623
electrically responsive cell2.56e-1339
electrically active cell2.56e-1339
ectodermal cell1.86e-1244
neurectodermal cell1.86e-1244
neural cell9.36e-1243

Uber anatomy
Ontology termp-valuen
central nervous system1.51e-3373
nervous system5.55e-3375
neurectoderm2.07e-3264
neural plate2.07e-3264
presumptive neural plate2.07e-3264
regional part of nervous system2.02e-3054
ectoderm-derived structure3.66e-3095
ectoderm3.66e-3095
presumptive ectoderm3.66e-3095
ecto-epithelium9.05e-2973
neural tube1.23e-2852
neural rod1.23e-2852
future spinal cord1.23e-2852
neural keel1.23e-2852
pre-chordal neural plate5.60e-2549
brain8.48e-2547
future brain8.48e-2547
regional part of brain6.98e-2446
gray matter7.61e-2434
anterior neural tube6.93e-2340
regional part of forebrain5.33e-2239
forebrain5.33e-2239
future forebrain5.33e-2239
brain grey matter5.14e-2029
regional part of telencephalon5.14e-2029
telencephalon5.14e-2029
structure with developmental contribution from neural crest1.49e-1992
cerebral cortex5.53e-1421
cerebral hemisphere5.53e-1421
pallium5.53e-1421
regional part of cerebral cortex3.77e-1117
occipital lobe5.77e-1110
visual cortex5.77e-1110
neocortex5.77e-1110
basal ganglion3.07e-078
nuclear complex of neuraxis3.07e-078
aggregate regional part of brain3.07e-078
collection of basal ganglia3.07e-078
cerebral subcortex3.07e-078
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