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FFCP PHASE1:Mm9::chr18:77424554..77424618,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:77424554..77424618,+
|DHSsupport=NA
|short_description=p1@St8sia5
|DPIdataset=NA
|description=CAGE_peak_1_at_St8sia5_5end
|association_with_transcript=0bp_to_ENSMUST00000079618,ENSMUST00000170756,NM_013666,NM_153124,uc008frg.2,uc008frh.2_5end
|EntrezGene=225742
|EntrezGene=225742
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=P70126,Q3TRR3,E9Q2X4
|UniProt=P70126,Q3TRR3,E9Q2X4
|association_with_transcript=0bp_to_ENSMUST00000079618,ENSMUST00000170756,NM_013666,NM_153124,uc008frg.2,uc008frh.2_5end
|cluster_id=chr18:77424554..77424618,+
|description=CAGE_peak_1_at_St8sia5_5end
|id=chr18:77424554..77424618,+
|ontology_enrichment_celltype=CL:0000221!8.32e-13!44;CL:0000133!8.32e-13!44;CL:0000540!1.23e-12!33;CL:0000047!1.23e-12!33;CL:0000031!1.23e-12!33;CL:0000404!1.23e-12!33;CL:0002319!2.08e-12!43;CL:0000117!4.28e-09!23;CL:0000337!4.28e-09!23;CL:0000393!2.70e-08!39;CL:0000211!2.70e-08!39;CL:0000055!3.67e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,7.82e-14,33;CL:0000047,7.82e-14,33;CL:0000031,7.82e-14,33;CL:0000404,7.82e-14,33;CL:0000221,1.09e-13,44;CL:0000133,1.09e-13,44;CL:0002319,3.27e-13,43;CL:0000117,3.08e-10,23;CL:0000337,3.08e-10,23;CL:0000393,5.33e-10,39;CL:0000211,5.33e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.16e-34!102;UBERON:0000924!4.16e-34!102;UBERON:0006601!4.16e-34!102;UBERON:0000073!1.75e-29!75;UBERON:0001016!1.75e-29!75;UBERON:0001017!1.64e-28!73;UBERON:0005743!1.64e-28!73;UBERON:0002346!6.99e-25!71;UBERON:0003075!6.99e-25!71;UBERON:0007284!6.99e-25!71;UBERON:0000033!2.51e-21!63;UBERON:0001049!3.90e-20!52;UBERON:0005068!3.90e-20!52;UBERON:0006241!3.90e-20!52;UBERON:0007135!3.90e-20!52;UBERON:0000955!2.17e-19!50;UBERON:0006238!2.17e-19!50;UBERON:0002616!1.06e-18!49;UBERON:0003056!1.93e-15!49;UBERON:0002020!6.23e-15!34;UBERON:0003080!1.51e-14!40;UBERON:0002780!5.61e-14!39;UBERON:0001890!5.61e-14!39;UBERON:0006240!5.61e-14!39;UBERON:0002791!2.33e-12!29;UBERON:0003528!2.33e-12!29;UBERON:0001893!2.33e-12!29;UBERON:0000956!5.07e-10!21;UBERON:0001869!5.07e-10!21;UBERON:0000203!5.07e-10!21;UBERON:0002619!7.33e-09!17;UBERON:0002021!1.52e-08!10;UBERON:0000411!1.52e-08!10;UBERON:0001950!1.52e-08!10;UBERON:0007811!1.68e-08!86;UBERON:0000153!3.15e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.64e-32,75;UBERON:0001017,5.38e-31,73;UBERON:0004121,1.97e-30,95;UBERON:0000924,1.97e-30,95;UBERON:0006601,1.97e-30,95;UBERON:0002346,2.01e-24,64;UBERON:0003075,2.01e-24,64;UBERON:0007284,2.01e-24,64;UBERON:0000073,5.94e-24,54;UBERON:0001049,2.39e-22,52;UBERON:0005068,2.39e-22,52;UBERON:0006241,2.39e-22,52;UBERON:0007135,2.39e-22,52;UBERON:0010371,8.36e-21,73;UBERON:0000955,4.24e-19,47;UBERON:0006238,4.24e-19,47;UBERON:0002616,2.66e-18,46;UBERON:0010314,1.07e-17,92;UBERON:0002020,3.47e-17,34;UBERON:0003056,9.96e-16,49;UBERON:0003080,2.36e-15,40;UBERON:0002780,1.11e-14,39;UBERON:0001890,1.11e-14,39;UBERON:0006240,1.11e-14,39;UBERON:0003528,4.82e-14,29;UBERON:0002791,4.82e-14,29;UBERON:0001893,4.82e-14,29;UBERON:0000956,8.32e-12,21;UBERON:0001869,8.32e-12,21;UBERON:0000203,8.32e-12,21;UBERON:0002619,2.25e-10,17;UBERON:0002021,3.64e-10,10;UBERON:0000411,3.64e-10,10;UBERON:0001950,3.64e-10,10;UBERON:0003076,8.26e-08,12;UBERON:0003057,8.26e-08,12
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3928355173436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57852828398938,0.219686182734472,0,0.699932108126813,1.43752564364972,0,0,0,0,0,0,2.22548106945558,2.11596391708813,2.53532561402472,0,0,0,0,0,2.39680088414724,3.07374644257244,1.97010263386108,2.43010688997043,3.15487442027073,23.7090317055157,17.6694832761291,4.89963196859816,4.12135525378416,5.51531271966013,37.4393995397922,40.7322608491749,35.7903222487047,1.05509030184155,1.18933936683133,0.52091337055676,54.1615018062679,18.5711661310454,27.8092810953794,14.7314292736834,12.1015928679237,4.84638559145781,4.24066682665831,6.19686792875641,0,0,0,1.07940638327563,0,0,11.3759980306719,0,0,0,5.21120653173718,0,0,0,0,0,0,2.74041311325744,0,7.71899123137089,0.693941307064543,2.43572382649713,6.91846491768175,6.63179618431539,6.23220147819235,1.13099932196708,2.96633961281249,0,3.5384422077995,9.05894359705491,8.17113618303456,5.33362778448744,0,258.818224558208,255.315535605602,0,0,0,0,20.3715269590559,24.7050325522058,3.39266750704734,82.2189034509468,71.6003280524925,29.7136903720171,33.2594589288903,0.101839363850316,4.97627882440372,12.1306924048164,8.20723237957248,0,0.689706313300419,0.360124259610698,1.35634336052144,3.26575195926374,2.562274405697,4.2165776051878,11.3829483125167,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.324275238183423,0.438599962275997,1.09775057645525,0.671032093801859,50.4695876553905,8.64398743985989,0,0,0.853153002140936,0.928946687441754,0.902072229254653,0.605050573870028,0.444756087689741,0.190225626112559,0,0.494096864172033,0,0.198956472041151,0,0,0.432276099749388,1.1948476395262,0.189667900953082,0,0,0.203651327845314,0.775809948670503,0.49095073923223,0.189709611372772,0.442830443938806,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,1.07638448113147,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.551873492609465,47.6835252263742,34.8118709178843,0,30.8014531189335,6.94118082715765,5.46614242015294,5.17016154558717,9.79772071605463,7.79795359288379,12.4553673547086,4.85772842009873,4.38383786866968,2.37172666767914,59.4444435380343,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0,0,0.188605079755898,0,1.22974059177571,0.516856586336442,0,1.06949213515416,0,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.857348140126369,3.54680467284547,6.77801506887868,5.43011767986999,1.8267896946876,0,15.0400770313312,0.220528398054962,3.46261131177108,0.322928853391811,0.965006798850494,0.238744688006273,0.328281799490123,0,39.4955893282386,0.170870880797853,0,0,0,0,0,0,0,0,0.954670618015114,0.949007980743406,0.406638934253697,0.540026704109006,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0.523511883968059,0,0.621339313086926,0.56369293868419,1.34564891439581,2.31641886639937,3.69457257853691,3.87479470433193,3.04121025883401,1.17357238645754,0.651021924219751,1.8874681996628,0.483168241652012,0.864090018773596,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,20.1790041417538,0,0,0,0,0.187682475451182,0,0.214368379079066,0,84.1480245499429,96.20797443,103.694087932531,123.390584922768,77.4143247340826,90.6472676867641,86.4028800296712,99.0706647093285,82.9250608441094,77.664046762773,0.103787347584177,1.59609949360412,0.170733605754134,1.45864030240976,1.04806581313991,0.551530525350042,1.33348036680969,0.824140228955577,3.85103051510178,4.04315538822076,2.02783439912192,1.50901073108861,2.06011316433741,2.04880487695582,1.49332219284595,0.952587382566147,2.66533949673168,2.31491064556446,1.64834360321323,2.06078488188156,1.37147700954166,2.30718548007139,2.62279808942053,3.0522747492789,1.50575008664529,2.79228206042532,1.64635175585495,2.36762740294059,2.58027816307137,1.12228454331548,1.77952527186261,2.9551344712669,2.86461730218783,2.16911577660352,1.92906610981141,2.74791635731741,2.10538447600868,2.57845264857958,4.3996316375834,8.16188250742207,10.2021847672985
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3928355173436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57852828398938,0.219686182734472,0,0.699932108126813,1.43752564364972,0,0,0,0,0,0,2.22548106945558,2.11596391708813,2.53532561402472,0,0,0,0,0,2.39680088414724,3.07374644257244,1.97010263386108,2.43010688997043,3.15487442027073,23.7090317055157,17.6694832761291,4.89963196859816,4.12135525378416,5.51531271966013,37.4393995397922,40.7322608491749,35.7903222487047,1.05509030184155,1.18933936683133,0.52091337055676,54.1615018062679,18.5711661310454,27.8092810953794,14.7314292736834,12.1015928679237,4.84638559145781,4.24066682665831,6.19686792875641,0,0,0,1.07940638327563,0,0,11.3759980306719,0,0,0,5.21120653173718,0,0,0,0,0,0,2.74041311325744,0,7.71899123137089,0.693941307064543,2.43572382649713,6.91846491768175,6.63179618431539,6.23220147819235,1.13099932196708,2.96633961281249,0,3.5384422077995,9.05894359705491,8.17113618303456,5.33362778448744,0,258.818224558208,255.315535605602,0,0,0,0,20.3715269590559,24.7050325522058,3.39266750704734,82.2189034509468,71.6003280524925,29.7136903720171,33.2594589288903,0.101839363850316,4.97627882440372,12.1306924048164,8.20723237957248,0,0.689706313300419,0.360124259610698,1.35634336052144,3.26575195926374,2.562274405697,4.2165776051878,11.3829483125167,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.324275238183423,0.438599962275997,1.09775057645525,0.671032093801859,50.4695876553905,8.64398743985989,0,0,0.853153002140936,0.928946687441754,0.902072229254653,0.605050573870028,0.444756087689741,0.190225626112559,0,0.494096864172033,0,0.198956472041151,0,0,0.432276099749388,1.1948476395262,0.189667900953082,0,0,0.203651327845314,0.775809948670503,0.49095073923223,0.189709611372772,0.442830443938806,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,1.07638448113147,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.551873492609465,47.6835252263742,34.8118709178843,0,30.8014531189335,6.94118082715765,5.46614242015294,5.17016154558717,9.79772071605463,7.79795359288379,12.4553673547086,4.85772842009873,4.38383786866968,2.37172666767914,59.4444435380343,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0,0,0.188605079755898,0,1.22974059177571,0.516856586336442,0,1.06949213515416,0,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.857348140126369,3.54680467284547,6.77801506887868,5.43011767986999,1.8267896946876,0,15.0400770313312,0.220528398054962,3.46261131177108,0.322928853391811,0.965006798850494,0.238744688006273,0.328281799490123,0,39.4955893282386,0.170870880797853,0,0,0,0,0,0,0,0,0.954670618015114,0.949007980743406,0.406638934253697,0.540026704109006,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0.523511883968059,0,0.621339313086926,0.56369293868419,1.34564891439581,2.31641886639937,3.69457257853691,3.87479470433193,3.04121025883401,1.17357238645754,0.651021924219751,1.8874681996628,0.483168241652012,0.864090018773596,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,20.1790041417538,0,0,0,0,0.187682475451182,0,0.214368379079066,0,84.1480245499429,96.20797443,103.694087932531,123.390584922768,77.4143247340826,90.6472676867641,86.4028800296712,99.0706647093285,82.9250608441094,77.664046762773,0.103787347584177,1.59609949360412,0.170733605754134,1.45864030240976,1.04806581313991,0.551530525350042,1.33348036680969,0.824140228955577,3.85103051510178,4.04315538822076,2.02783439912192,1.50901073108861,2.06011316433741,2.04880487695582,1.49332219284595,0.952587382566147,2.66533949673168,2.31491064556446,1.64834360321323,2.06078488188156,1.37147700954166,2.30718548007139,2.62279808942053,3.0522747492789,1.50575008664529,2.79228206042532,1.64635175585495,2.36762740294059,2.58027816307137,1.12228454331548,1.77952527186261,2.9551344712669,2.86461730218783,2.16911577660352,1.92906610981141,2.74791635731741,2.10538447600868,2.57845264857958,4.3996316375834,8.16188250742207,10.2021847672985
|short_description=p1@St8sia5
}}
}}

Latest revision as of 18:00, 1 October 2015

Short description:p1@St8sia5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_St8sia5_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_ENSMUST00000079618, ENSMUST00000170756, NM_013666, NM_153124, uc008frg.2, uc008frh.2_5end
EntrezGene:St8sia5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@St8sia5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.79
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E454.16
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D94.24
Mouse Schwann, donor2.CNhs12573.11746-123F96.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D77.72
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F56.63
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F59.06
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2258.82
cerebellum, neonate N30.CNhs11135.1395-42I2255.32
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A420.37
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D582.22
cortex, neonate N30.CNhs11107.1392-42F271.60
diencephalon, adult.CNhs10482.20-12F229.71
diencephalon, neonate N30.CNhs11201.1388-42B233.26
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B212.13
eyeball, adult.CNhs10484.31-12G48.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E850.47
hippocampus, neonate N00.CNhs11228.627-43G18.64
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C247.68
medulla oblongata, neonate N30.CNhs11200.1396-42A334.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C230.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.80
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I959.44
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G315.04
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C939.50
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B420.18
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A184.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A296.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3103.69
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7123.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A477.41
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A590.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A686.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A799.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A882.93
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A977.66
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D18.16
whole body, neonate N10.CNhs10518.761-6B410.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.82e-1433
neuronal stem cell7.82e-1433
neuroblast7.82e-1433
electrically signaling cell7.82e-1433
ectodermal cell1.09e-1344
neurectodermal cell1.09e-1344
neural cell3.27e-1343
CNS neuron (sensu Vertebrata)3.08e-1023
neuroblast (sensu Vertebrata)3.08e-1023
electrically responsive cell5.33e-1039
electrically active cell5.33e-1039

Uber anatomy
Ontology termp-valuen
nervous system3.64e-3275
central nervous system5.38e-3173
ectoderm-derived structure1.97e-3095
ectoderm1.97e-3095
presumptive ectoderm1.97e-3095
neurectoderm2.01e-2464
neural plate2.01e-2464
presumptive neural plate2.01e-2464
regional part of nervous system5.94e-2454
neural tube2.39e-2252
neural rod2.39e-2252
future spinal cord2.39e-2252
neural keel2.39e-2252
ecto-epithelium8.36e-2173
brain4.24e-1947
future brain4.24e-1947
regional part of brain2.66e-1846
structure with developmental contribution from neural crest1.07e-1792
gray matter3.47e-1734
pre-chordal neural plate9.96e-1649
anterior neural tube2.36e-1540
regional part of forebrain1.11e-1439
forebrain1.11e-1439
future forebrain1.11e-1439
brain grey matter4.82e-1429
regional part of telencephalon4.82e-1429
telencephalon4.82e-1429
cerebral cortex8.32e-1221
cerebral hemisphere8.32e-1221
pallium8.32e-1221
regional part of cerebral cortex2.25e-1017
occipital lobe3.64e-1010
visual cortex3.64e-1010
neocortex3.64e-1010
posterior neural tube8.26e-0812
chordal neural plate8.26e-0812
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