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FFCP PHASE1:Mm9::chr1:88051327..88051396,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=78795
|EntrezGene=78795
|HGNC=
|HGNC=
|MCL_coexpression_id=463
|TSSclassifier=NA
|UniProt=Q9D2I5
|UniProt=Q9D2I5
|association_with_transcript=0bp_to_ENSMUST00000027434,ENSMUST00000113309,ENSMUST00000123618,ENSMUST00000131412,ENSMUST00000134858,ENSMUST00000135973,ENSMUST00000153389,ENSMUST00000153653,ENSMUST00000155168,NM_027456,NM_030184,uc007bva.1,uc007bvb.1,uc007bvc.1,uc007bvd.1,uc007bve.1,uc007bvf.1,uc007bvg.1,uc007bvh.1,uc007bvi.1_5end
|association_with_transcript=0bp_to_ENSMUST00000027434,ENSMUST00000113309,ENSMUST00000123618,ENSMUST00000131412,ENSMUST00000134858,ENSMUST00000135973,ENSMUST00000153389,ENSMUST00000153653,ENSMUST00000155168,NM_027456,NM_030184,uc007bva.1,uc007bvb.1,uc007bvc.1,uc007bvd.1,uc007bve.1,uc007bvf.1,uc007bvg.1,uc007bvh.1,uc007bvi.1_5end
|cluster_id=chr1:88051327..88051396,+
|description=CAGE_peak_1_at_Armc9_5end
|description=CAGE_peak_1_at_Armc9_5end
|id=chr1:88051327..88051396,+
|id=chr1:88051327..88051396,+
|ontology_enrichment_celltype=CL:0000117!2.50e-09!23;CL:0000337!2.50e-09!23;CL:0000221!2.47e-08!44;CL:0000133!2.47e-08!44;CL:0000540!2.74e-08!33;CL:0000047!2.74e-08!33;CL:0000031!2.74e-08!33;CL:0000404!2.74e-08!33;CL:0002319!4.15e-08!43;CL:0000393!4.41e-07!39;CL:0000211!4.41e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-09,23;CL:0000337,2.49e-09,23;CL:0000221,2.47e-08,44;CL:0000133,2.47e-08,44;CL:0000540,2.73e-08,33;CL:0000047,2.73e-08,33;CL:0000031,2.73e-08,33;CL:0000404,2.73e-08,33;CL:0002319,4.15e-08,43;CL:0000393,4.41e-07,39;CL:0000211,4.41e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.71e-26!73;UBERON:0005743!2.71e-26!73;UBERON:0000073!8.82e-25!75;UBERON:0001016!8.82e-25!75;UBERON:0000033!7.12e-24!63;UBERON:0002346!8.34e-24!71;UBERON:0003075!8.34e-24!71;UBERON:0007284!8.34e-24!71;UBERON:0001049!1.45e-23!52;UBERON:0005068!1.45e-23!52;UBERON:0006241!1.45e-23!52;UBERON:0007135!1.45e-23!52;UBERON:0000955!7.87e-23!50;UBERON:0006238!7.87e-23!50;UBERON:0002616!3.72e-22!49;UBERON:0003056!7.27e-22!49;UBERON:0004121!8.41e-21!102;UBERON:0000924!8.41e-21!102;UBERON:0006601!8.41e-21!102;UBERON:0003080!1.73e-19!40;UBERON:0002780!7.39e-19!39;UBERON:0001890!7.39e-19!39;UBERON:0006240!7.39e-19!39;UBERON:0002020!1.02e-16!34;UBERON:0000153!6.71e-15!94;UBERON:0002791!7.06e-15!29;UBERON:0003528!7.06e-15!29;UBERON:0001893!7.06e-15!29;UBERON:0007811!9.47e-14!86;UBERON:0000956!1.24e-10!21;UBERON:0001869!1.24e-10!21;UBERON:0000203!1.24e-10!21;UBERON:0002619!5.23e-10!17;UBERON:0000475!9.38e-09!200;UBERON:0002021!2.14e-07!10;UBERON:0000411!2.14e-07!10;UBERON:0001950!2.14e-07!10;UBERON:0000025!3.79e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.26e-27,64;UBERON:0003075,9.26e-27,64;UBERON:0007284,9.26e-27,64;UBERON:0001017,2.70e-26,73;UBERON:0001016,8.79e-25,75;UBERON:0000073,3.10e-24,54;UBERON:0001049,1.45e-23,52;UBERON:0005068,1.45e-23,52;UBERON:0006241,1.45e-23,52;UBERON:0007135,1.45e-23,52;UBERON:0010371,7.63e-23,73;UBERON:0004121,1.44e-22,95;UBERON:0000924,1.44e-22,95;UBERON:0006601,1.44e-22,95;UBERON:0003056,7.25e-22,49;UBERON:0000955,1.44e-21,47;UBERON:0006238,1.44e-21,47;UBERON:0002616,6.66e-21,46;UBERON:0003080,1.73e-19,40;UBERON:0002780,7.37e-19,39;UBERON:0001890,7.37e-19,39;UBERON:0006240,7.37e-19,39;UBERON:0002020,1.01e-16,34;UBERON:0003528,7.04e-15,29;UBERON:0002791,7.04e-15,29;UBERON:0001893,7.04e-15,29;UBERON:0010314,5.39e-14,92;UBERON:0000956,1.24e-10,21;UBERON:0001869,1.24e-10,21;UBERON:0000203,1.24e-10,21;UBERON:0002619,5.22e-10,17;UBERON:0002021,2.14e-07,10;UBERON:0000411,2.14e-07,10;UBERON:0001950,2.14e-07,10;UBERON:0000025,3.92e-07,114
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|phase1_expression=12.1713123799643,0.697950815278722,0.454999239389536,1.51232105653415,0,2.35030980676646,3.73780224952841,4.77756296733832,0.281577444303333,0.468129052643987,1.71217968225505,2.31339261086476,4.45121897821135,3.84649770643589,14.3237197580735,15.1856450542369,20.2872944657163,5.0473946457318,3.97631857456642,3.81950686618227,31.5510606460469,5.06383851124515,9.40319240900167,1.59992422793407,0.68822784320151,0,1.7230479846363,2.15471232685889,1.33016393619462,0.504060259519861,1.99557459589774,6.35030673459631,6.1506478758457,15.8481681015439,6.06588401477677,4.3221007793208,4.69589519403449,1.25559489221072,0,0,0.588231488031014,0.683045484958446,0.485510353031154,13.3450627054112,12.4693625400003,15.9685674380663,3.9119567217402,18.7501634487184,16.2567775223509,16.5265414213141,12.8787507895334,25.8754615856949,2.68452169692378,4.35217285206807,7.05796978199174,3.8588915405392,4.87106847895886,6.70373719960675,19.4223802425214,22.7466121086974,16.4796164911607,12.5372476865579,6.22506357277798,4.94944844504769,1.97773272513395,7.104801149461,9.28760342607055,13.0634223809329,13.7907184370275,12.0155285115205,12.4091727197315,23.4233807211119,20.7616428494517,15.1888591026543,16.5812664861549,16.5459381589804,14.3150645299205,22.0899094887375,17.9719643909805,22.420668914133,21.7740591773735,20.8365348222704,17.3093459380856,24.1987922313622,23.2253336620751,12.6690291753677,22.9218406086556,14.7255562201987,6.28527404665428,6.2724394888632,16.232411367294,0.860423876981386,1.3599426674155,5.93673510801599,5.19821133958135,4.03224198387602,8.84799846830037,11.4188316127299,10.6512261887176,8.83348936275851,14.2251853974447,20.5322363862909,12.7402619853323,7.11066703153331,6.27824018932521,5.57391704045217,6.57181778519218,7.87868770061514,7.25026074212081,10.2425075954729,9.88866362566974,7.61163695780353,7.37969591219387,10.7013074792362,10.347806227942,8.67099480174761,6.42706916109372,5.63937491987655,7.96149496754887,7.44127509758082,11.9254419968613,11.1521308221101,3.72783522436244,21.6657789788545,21.154117388159,2.55457055208591,2.15667224110656,1.79970819298022,1.77898317902291,25.9137806170343,30.652540388848,26.0104508873629,29.0286614721102,29.407277592988,24.103413168909,26.120843353909,15.6832620329487,12.4406970610093,11.8779696463827,9.6803253707778,14.5734896118228,12.8745178482745,13.5046597354012,16.7282347797644,16.600905792924,17.4234659587396,17.4285207681096,25.8703370739016,14.4430555265004,13.615637772083,16.7153567955751,10.5213951565236,14.1804097105055,16.0195996600197,11.9353639116607,13.9323986772945,2.1066395619397,1.80143534980301,0.852490498186778,6.42089894860056,8.67746421930056,8.4629168886677,6.62885259638589,6.88674811115913,7.55908853148153,7.67362017676346,8.04820204198858,8.29033930806903,7.40519324610662,7.05920095540109,5.18840381093477,4.5321996101853,4.83010253640311,4.2946054003319,27.1274033647724,24.8000115834075,5.28670052774077,3.70230793328962,15.9966187901425,14.3986736553472,11.2114691350221,9.07575860805041,11.1189021922435,12.3646656973163,3.32170343081158,8.89374355509659,13.5721012752146,9.54991065797524,12.8676297498619,3.59527763461689,4.97117514711797,3.78368419183298,12.1387456609972,14.0525670509966,16.9061603509621,10.7935203758017,15.3222464862424,12.4841759404767,16.5047361894312,11.3659813944294,13.1878931386755,11.7227305725711,4.44678940630723,9.34332592010127,9.63139076054695,13.2668646307064,10.3458661908136,11.576503668116,10.9489116266011,4.89083433666378,5.5125977103512,5.76578967694971,8.62609239164127,5.58211421502755,3.74445207737473,3.78868316920668,4.4849353380478,3.37710464954357,9.23765950833023,14.2118558827864,11.2445833744998,13.0703716046895,12.6732734075791,11.2229192486017,10.7119638398706,7.80534591431195,11.1920952315396,9.30151696524855,12.2780171866265,11.1427054006702,11.7425787668809,10.4147322178688,6.03165135757089,4.89515115436839,2.45882136509518,5.79467167239938,22.6376331882787,22.504643825703,11.3115112309906,5.80683132570058,11.9893123378178,16.3984272604588,12.9254038639679,8.84184552424442,10.2487390077901,12.7384438854975,7.2865926301481,9.64444331107329,11.4633455604492,26.66966926301,14.9037089468682,10.8620018237026,14.1711654637611,19.7964147567043,6.63725691699814,11.1679092631291,9.06970670894253,9.05304382828311,10.0402643579463,11.6825356218692,11.1124166062335,10.9060118843252,9.9819265947722,6.95280867458795,7.37930260024991,11.3449097573006,26.8947288545492,14.5849486165361,15.6524007377133,16.0752776273694,15.6059405605201,13.0209236849512,20.5686275752651,19.1812917942198,6.33613611772018,7.20229040936989,7.05690873775878,10.5527201882547,6.94297034792394,9.71038091343309,8.23669173621642,9.19189038572343,4.37221254944776,24.1052892613663,11.2774781326583,11.3512777379772,11.4820606969221,16.1996873024034,21.734382207643,11.6676868335327,4.58941760983409,6.43776680688827,5.94259887359022,2.86401185404534,12.0207677560831,13.8257237646257,11.0165447638237,11.2907679847813,10.2630404960703,11.3286050963249,9.4224939526883,4.4498510137285,6.48074866458964,4.34937519160848,139.232155854995,13.4564891439581,12.7403037651965,11.8615224889869,13.432621641684,11.9958849098453,15.6085127398853,15.2339130267422,19.6086974076079,79.23959163093,86.9850618898754,8.84831137758899,9.93353554921804,7.29247795870273,7.27556608675652,9.13036147904155,5.36439657909415,8.17329056735788,9.15675068482379,10.7024436945036,9.98309167180498,7.66279007039988,8.67375138583797,8.94770127255064,11.4539364137938,6.80191150845634,6.21560669447381,6.10054224944435,7.89057696911169,11.0118068598349,9.75948872346146,11.5385523288377,7.07415650960917,6.01886524842436,26.5433366030021,31.302116082488,28.6447756719698,25.0905646221784,23.2928056722018,31.7265436903674,29.0259675099676,29.2708782095743,27.6416869480365,18.1216109113137,10.1711600632493,17.1580695562443,15.8782253351345,13.8570828728928,11.528723944539,6.25067928730048,9.77885602327107,11.3319281481392,10.5903339165299,9.34979683526051,11.660047794951,8.67681170375951,9.73871677686777,11.0763513660424,11.0850455084334,12.859929664643,9.38663040153329,10.0312794641127,13.1867488257058,11.3343168503486,12.0004238334895,8.16388708332953,10.0143199777875,11.9184061638509,12.0460006931623,10.7460552022429,8.59761472502031,12.3642764375786,9.64209208305619,13.4674145197857,12.1007718486658,9.65343927280522,7.36615877705441,11.9301367713194,10.8027702149439,11.7410971630835,9.82512755470715,5.58664740525576,5.7386499620653,7.27951683094401,7.41977073985349
|short_description=p1@Armc9
|short_description=p1@Armc9
}}
}}

Latest revision as of 17:31, 1 October 2015

Short description:p1@Armc9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Armc9_5end
Coexpression cluster:MCL_coexpression_mm9:463
Association with transcript: 0bp_to_ENSMUST00000027434, ENSMUST00000113309, ENSMUST00000123618, ENSMUST00000131412, ENSMUST00000134858, ENSMUST00000135973, ENSMUST00000153389, ENSMUST00000153653, ENSMUST00000155168, NM_027456, NM_030184, uc007bva.1, uc007bvb.1, uc007bvc.1, uc007bvd.1, uc007bve.1, uc007bvf.1, uc007bvg.1, uc007bvh.1, uc007bvi.1_5end
EntrezGene:Armc9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Armc9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.19
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.98
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.75
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.26
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C319.42
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.54
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E813.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.79
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.76
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.97
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.23
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.73
Mouse Schwann, donor1.CNhs12507.11728-123D96.29
Mouse Schwann, donor2.CNhs12573.11746-123F96.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.88
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D710.24
adrenal gland, embryo E14.CNhs11038.406-44C59.89
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F510.70
adrenal gland, neonate N00.CNhs11191.1311-23C110.35
adrenal gland, neonate N25.CNhs11223.1377-27I38.67
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H15.64
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A611.93
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I221.15
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A425.91
corpus striatum, adult.CNhs10487.19-21D830.65
corpus striatum, neonate N00.CNhs11226.630-43F126.01
cortex, adult.CNhs10473.12-14D529.03
cortex, neonate N30.CNhs11107.1392-42F229.41
diencephalon, adult.CNhs10482.20-12F224.10
diencephalon, neonate N30.CNhs11201.1388-42B226.12
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.44
epididymis, adult.CNhs10490.58-23B211.88
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C614.57
eyeball, embryo E14.CNhs10521.399-16E212.87
eyeball, embryo E15.CNhs10593.426-16C913.50
eyeball, embryo E17.CNhs11023.1261-18D416.73
eyeball, neonate N00.CNhs11207.633-15C616.60
eyeball, neonate N01.CNhs11140.1532-43E717.42
eyeball, neonate N02.CNhs11205.1551-44G817.43
eyeball, neonate N16.CNhs11188.777-19A225.87
forelimb, embryo E11.CNhs10596.335-25E214.44
forelimb, embryo E12.CNhs10600.359-14H213.62
forelimb, embryo E13.CNhs10589.384-1E216.72
forelimb, embryo E14.CNhs10577.413-26A810.52
forelimb, embryo E15.CNhs11007.437-20E714.18
forelimb, embryo E17.CNhs10598.1517-43C416.02
forelimb, embryo E18.CNhs11008.1520-43B511.94
gonad, embryo E13.CNhs11044.1564-45I613.93
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I98.46
heart, embryo E14.CNhs10597.403-26D46.63
heart, embryo E15.CNhs11017.431-16C86.89
heart, embryo E16.CNhs11021.457-17C67.56
heart, embryo E17.CNhs11025.479-18E57.67
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E38.29
heart, neonate N03.CNhs11221.1349-25I27.41
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G15.19
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E827.13
hippocampus, neonate N00.CNhs11228.627-43G124.80
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I516.00
intestine, embryo E13.CNhs11010.381-16D514.40
intestine, embryo E15.CNhs10602.976-16D811.21
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D311.12
intestine, embryo E18.CNhs10526.1289-20F712.36
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E98.89
intestine, neonate N06.CNhs11102.688-20B813.57
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A512.87
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I912.14
kidney, embryo E15.CNhs10997.434-16F814.05
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I210.79
kidney, embryo E18.CNhs11001.1288-20C715.32
kidney, neonate N00.CNhs11214.646-21G712.48
kidney, neonate N10.CNhs11206.758-6D516.50
kidney, neonate N20.CNhs11113.832-19I111.37
kidney, neonate N25.CNhs11122.1353-25F313.19
kidney, neonate N30.CNhs11203.1385-42H111.72
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F89.34
liver, embryo E13.CNhs10524.378-3H69.63
liver, embryo E14.CNhs10594.409-16E113.27
liver, embryo E15.CNhs10520.433-16D710.35
liver, embryo E16.CNhs10523.462-17F511.58
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H14.48
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B19.24
lung, embryo E12.CNhs10522.354-16G214.21
lung, embryo E14.CNhs10604.404-26F811.24
lung, embryo E15.CNhs11020.432-17C513.07
lung, embryo E16.CNhs10998.458-17B612.67
lung, embryo E17.CNhs10605.480-44A611.22
lung, embryo E18.CNhs10583.1287-20I610.71
lung, neonate N00.CNhs11224.640-42C67.81
lung, neonate N06.CNhs11212.683-20E511.19
lung, neonate N07.CNhs11111.715-19A39.30
lung, neonate N10.CNhs11219.750-23E612.28
lung, neonate N20.CNhs11109.822-18A411.14
lung, neonate N25.CNhs11119.1359-25C711.74
lung, neonate N30.CNhs11133.1394-42H210.41
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C222.64
medulla oblongata, neonate N30.CNhs11200.1396-42A322.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I926.67
ovary, adult.CNhs10507.91-2I714.90
ovary, embryo E18.CNhs11040.505-44H710.86
ovary, neonate N00.CNhs11217.1299-22I414.17
oviduct, adult pregnant day01.CNhs10500.988-6G619.80
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F411.17
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E59.05
pancreas, embryo E17.CNhs10599.1558-45G310.04
pancreas, embryo E18.CNhs10580.1535-43I711.68
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G826.89
pituitary gland, embryo E12.CNhs11018.346-16E614.58
pituitary gland, embryo E13.CNhs11009.370-44C715.65
pituitary gland, embryo E14.CNhs11037.398-44A516.08
pituitary gland, embryo E15.CNhs10592.427-16B915.61
pituitary gland, embryo E16.CNhs11036.449-43F613.02
pituitary gland, embryo E17.CNhs11039.1265-44F520.57
pituitary gland, neonate N00.CNhs11190.1308-22E919.18
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F87.06
skin, adult.CNhs10492.30-1C310.55
skin, neonate N00.CNhs11124.650-25G46.94
skin, neonate N03.CNhs11215.662-22H39.71
skin, neonate N06.CNhs11097.693-20I58.24
skin, neonate N10.CNhs11108.762-6C49.19
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C924.11
spleen, adult.CNhs10465.25-2G211.28
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F211.48
spleen, neonate N10.CNhs11116.752-24D116.20
spleen, neonate N20.CNhs11112.824-19H121.73
spleen, neonate N25.CNhs11099.1354-25G311.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.94
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E312.02
stomach, embryo E15.CNhs10603.1252-16G813.83
stomach, embryo E16.CNhs11022.459-17D411.02
stomach, embryo E17.CNhs11006.1035-18D511.29
stomach, embryo E18.CNhs10999.1286-20C610.26
stomach, neonate N03.CNhs11193.1340-24B811.33
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I16.48
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G5139.23
testis, embryo E13.CNhs11031.389-23F513.46
testis, embryo E15.CNhs11034.443-27C512.74
testis, embryo E16.CNhs11033.470-26G511.86
testis, embryo E17.CNhs11029.486-18I513.43
testis, embryo E18.CNhs11027.503-18G512.00
testis, neonate N00.CNhs11189.1300-22B715.61
testis, neonate N07.CNhs11222.726-26I415.23
testis, neonate N10.CNhs11204.763-44D919.61
testis, neonate N20.CNhs11110.839-18H379.24
testis, neonate N30.CNhs11130.1391-42E286.99
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I49.93
thymus, embryo E15.CNhs11005.430-45I27.29
thymus, embryo E16.CNhs11002.456-26C57.28
thymus, embryo E17.CNhs10581.478-18C19.13
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F88.17
thymus, neonate N03.CNhs11137.2104-43C79.16
thymus, neonate N06.CNhs11197.681-26C410.70
thymus, neonate N07.CNhs11211.713-19D39.98
thymus, neonate N10.CNhs11194.748-24E47.66
thymus, neonate N20.CNhs11186.820-7A28.67
thymus, neonate N25.CNhs11125.1362-25G78.95
thymus, neonate N30.CNhs11132.1393-42G211.45
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.10
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.89
urinary bladder, adult.CNhs10481.879-12E411.01
uterus, adult pregnant day19.CNhs10497.590-15F59.76
uterus, adult.CNhs10509.92-27E511.54
vagina, adult.CNhs10502.89-27D57.07
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A126.54
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.27
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A827.64
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I810.17
whole body, embryo E12.CNhs10587.857-27C917.16
whole body, embryo E13.CNhs10512.372-23H215.88
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B111.53
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.93
whole body, embryo E17.5.CNhs10513.490-9F910.80
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B39.83
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.49e-0923
neuroblast (sensu Vertebrata)2.49e-0923
ectodermal cell2.47e-0844
neurectodermal cell2.47e-0844
neuron2.73e-0833
neuronal stem cell2.73e-0833
neuroblast2.73e-0833
electrically signaling cell2.73e-0833
neural cell4.15e-0843
electrically responsive cell4.41e-0739
electrically active cell4.41e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm9.26e-2764
neural plate9.26e-2764
presumptive neural plate9.26e-2764
central nervous system2.70e-2673
nervous system8.79e-2575
regional part of nervous system3.10e-2454
neural tube1.45e-2352
neural rod1.45e-2352
future spinal cord1.45e-2352
neural keel1.45e-2352
ecto-epithelium7.63e-2373
ectoderm-derived structure1.44e-2295
ectoderm1.44e-2295
presumptive ectoderm1.44e-2295
pre-chordal neural plate7.25e-2249
brain1.44e-2147
future brain1.44e-2147
regional part of brain6.66e-2146
anterior neural tube1.73e-1940
regional part of forebrain7.37e-1939
forebrain7.37e-1939
future forebrain7.37e-1939
gray matter1.01e-1634
brain grey matter7.04e-1529
regional part of telencephalon7.04e-1529
telencephalon7.04e-1529
structure with developmental contribution from neural crest5.39e-1492
cerebral cortex1.24e-1021
cerebral hemisphere1.24e-1021
pallium1.24e-1021
regional part of cerebral cortex5.22e-1017
occipital lobe2.14e-0710
visual cortex2.14e-0710
neocortex2.14e-0710
tube3.92e-07114
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