Personal tools

FFCP PHASE1:Mm9::chr5:115644292..115644336,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=29867
|EntrezGene=29867
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=D3Z1M4
|UniProt=D3Z1M4
|association_with_transcript=53bp_to_ENSMUST00000112113_5end
|association_with_transcript=53bp_to_ENSMUST00000112113_5end
|cluster_id=chr5:115644292..115644336,-
|description=CAGE_peak_1_at_Cabp1_5end
|description=CAGE_peak_1_at_Cabp1_5end
|id=chr5:115644292..115644336,-
|id=chr5:115644292..115644336,-
|ontology_enrichment_celltype=CL:0000117!5.89e-13!23;CL:0000337!5.89e-13!23;CL:0000540!3.38e-09!33;CL:0000047!3.38e-09!33;CL:0000031!3.38e-09!33;CL:0000404!3.38e-09!33;CL:0000221!4.78e-07!44;CL:0000133!4.78e-07!44;CL:0002319!6.15e-07!43
|ontology_enrichment_celltype=CL:0000117!5.89e-13!23;CL:0000337!5.89e-13!23;CL:0000540!3.38e-09!33;CL:0000047!3.38e-09!33;CL:0000031!3.38e-09!33;CL:0000404!3.38e-09!33;CL:0000221!4.78e-07!44;CL:0000133!4.78e-07!44;CL:0002319!6.15e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.29e-18,23;CL:0000337,2.29e-18,23;CL:0000540,2.66e-11,33;CL:0000047,2.66e-11,33;CL:0000031,2.66e-11,33;CL:0000404,2.66e-11,33;CL:0000393,2.14e-08,39;CL:0000211,2.14e-08,39;CL:0002319,1.18e-07,43;CL:0000221,2.57e-07,44;CL:0000133,2.57e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.09e-28!71;UBERON:0003075!2.09e-28!71;UBERON:0007284!2.09e-28!71;UBERON:0000033!5.72e-24!63;UBERON:0001049!8.60e-24!52;UBERON:0005068!8.60e-24!52;UBERON:0006241!8.60e-24!52;UBERON:0007135!8.60e-24!52;UBERON:0004121!2.76e-22!102;UBERON:0000924!2.76e-22!102;UBERON:0006601!2.76e-22!102;UBERON:0000073!3.49e-22!75;UBERON:0001016!3.49e-22!75;UBERON:0000955!4.76e-22!50;UBERON:0006238!4.76e-22!50;UBERON:0001017!1.08e-21!73;UBERON:0005743!1.08e-21!73;UBERON:0002616!2.02e-21!49;UBERON:0003056!4.50e-21!49;UBERON:0002020!3.39e-19!34;UBERON:0003080!6.81e-18!40;UBERON:0002780!2.82e-17!39;UBERON:0001890!2.82e-17!39;UBERON:0006240!2.82e-17!39;UBERON:0002791!5.70e-16!29;UBERON:0003528!5.70e-16!29;UBERON:0001893!5.70e-16!29;UBERON:0000956!5.33e-12!21;UBERON:0001869!5.33e-12!21;UBERON:0000203!5.33e-12!21;UBERON:0007811!6.09e-12!86;UBERON:0000153!4.34e-10!94;UBERON:0002619!1.44e-09!17;UBERON:0002021!9.18e-09!10;UBERON:0000411!9.18e-09!10;UBERON:0001950!9.18e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.59e-33,64;UBERON:0003075,3.59e-33,64;UBERON:0007284,3.59e-33,64;UBERON:0000073,1.85e-31,54;UBERON:0001049,5.51e-30,52;UBERON:0005068,5.51e-30,52;UBERON:0006241,5.51e-30,52;UBERON:0007135,5.51e-30,52;UBERON:0002020,2.62e-27,34;UBERON:0010371,1.00e-26,73;UBERON:0001017,2.50e-26,73;UBERON:0001016,2.98e-26,75;UBERON:0003056,3.69e-26,49;UBERON:0000955,4.35e-25,47;UBERON:0006238,4.35e-25,47;UBERON:0004121,6.58e-25,95;UBERON:0000924,6.58e-25,95;UBERON:0006601,6.58e-25,95;UBERON:0002616,3.26e-24,46;UBERON:0003528,1.52e-22,29;UBERON:0002791,1.52e-22,29;UBERON:0001893,1.52e-22,29;UBERON:0003080,4.74e-22,40;UBERON:0002780,3.60e-21,39;UBERON:0001890,3.60e-21,39;UBERON:0006240,3.60e-21,39;UBERON:0010314,2.52e-19,92;UBERON:0000956,1.11e-16,21;UBERON:0001869,1.11e-16,21;UBERON:0000203,1.11e-16,21;UBERON:0002619,4.20e-13,17;UBERON:0002021,3.49e-12,10;UBERON:0000411,3.49e-12,10;UBERON:0001950,3.49e-12,10;UBERON:0003076,2.73e-08,12;UBERON:0003057,2.73e-08,12;UBERON:0002420,5.41e-07,8;UBERON:0007245,5.41e-07,8;UBERON:0010009,5.41e-07,8;UBERON:0010011,5.41e-07,8;UBERON:0000454,5.41e-07,8;UBERON:0002240,7.09e-07,6;UBERON:0005174,7.09e-07,6;UBERON:0001137,7.09e-07,6
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0.281577444303333,1.17032263160997,0,0,0,0,0,0,0,0,0,0,7.14363637268986,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.388859798148567,0,0,0,0,0,0,0,0,2.42779753031517,5.28990979272033,6.33831403506179,0,0,0.449949858640699,0,0,0.599200221036809,0,19.0788886647599,12.2855403881839,17.4569717921647,21.1381728458815,17.4486147351775,5.63457676388789,4.60058260887535,2.75765635983006,4.40463523997555,9.83192503255945,13.0565553267807,2.63772575460388,2.47016637726506,3.12548022334056,18.4260779340911,9.00420176050688,13.7518422999129,19.7401152267357,21.3557521198654,15.6575534493252,0.681535739998656,1.66257432234928,0,0,0,0,0,0,1.12355536105401,0,0,0,0.704217098883403,0,0,0,0,0,0,0.5709193985953,0,4.89859058913922,0.693941307064543,0.304465478312141,0.691846491768175,0.452167921657868,0.587943535678524,1.75933227861546,0,0,0,0.647067399789637,0,0,0,21.0802173848314,30.1603257811375,0,0,0,0,17.2259235315546,30.652540388848,4.39790232395025,63.2720525499886,96.9161583281953,15.1685272528479,22.8760180925538,0.509196819251581,0,0,2.52530227063769,0.260240885925407,1.14951052216736,2.16074555766419,2.71268672104287,4.08218994907967,4.22775276940004,4.59138450342671,7.76110112217047,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0.536546802799238,0,0,0.656669856316381,0,0.146199987425332,0.439100230582101,0.268412837520744,32.3846520788756,5.86556290561921,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0,0.380451252225118,0,0.658795818896044,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,0,0,1.13800740571849,0.342745537829186,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,27.6147014779002,22.504643825703,0,0,0.315508219416257,0.780877488593277,1.29254038639679,0,0,0,0.404810701674894,0,0.790575555893047,13.8168166061377,0.99358059645788,1.24645922567079,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,0.922305443831782,0.516856586336442,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,2.06271086496374,5.44703369206061,0.18006109403131,0.129358683782755,0.428674070063185,0.532020700926821,0.891844088010353,1.97458824722545,1.8267896946876,0,0,0.220528398054962,0,0.484393280087717,0.180938774784468,0,0,0,28.9263471136395,0,0,0,0,0,0.228778173206523,0.679913719975421,0.139951452323658,0.138199973804424,0,0.158167996790568,0.406638934253697,0.756037385752609,0.418176592028937,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0,2.25477175473676,0.747582730219894,3.97100377097034,4.27792614356905,2.71235629303235,6.08242051766801,3.40335992072686,13.4110516389269,9.54220034273969,4.1069300540421,0.576060012515731,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,12.0377304968487,73.9824913828357,63.9852078744976,71.6119391799246,66.1634752023197,100.022047886514,96.6904188658817,86.4028800296712,101.772591928674,95.6130482956672,104.587582973868,1.45302286617847,1.19707462020309,3.07320490357441,0.729320151204882,1.88651846365184,1.65459157605013,1.33348036680969,1.03017528619447,1.60459604795908,2.02157769411038,0.50695859978048,1.13175804831646,0.842773567228942,1.34452820050225,0.918967503289812,1.42888107384922,1.0429589335037,1.15745532278223,0.824171801606613,0.735994600671987,2.74295401908332,0.70990322463735,0.953744759789284,1.45346416632329,1.41164070622996,1.26921911837515,1.64635175585495,1.05227884575137,0.679020569229309,0.561142271657738,1.66089025373844,0.788035859004508,0.818462086339379,1.54936841185966,1.35034627686799,3.2475375131933,2.10538447600868,0.214871054048298,0.956441660344217,0.441182838239031,0.927471342481686
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0.281577444303333,1.17032263160997,0,0,0,0,0,0,0,0,0,0,7.14363637268986,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.388859798148567,0,0,0,0,0,0,0,0,2.42779753031517,5.28990979272033,6.33831403506179,0,0,0.449949858640699,0,0,0.599200221036809,0,19.0788886647599,12.2855403881839,17.4569717921647,21.1381728458815,17.4486147351775,5.63457676388789,4.60058260887535,2.75765635983006,4.40463523997555,9.83192503255945,13.0565553267807,2.63772575460388,2.47016637726506,3.12548022334056,18.4260779340911,9.00420176050688,13.7518422999129,19.7401152267357,21.3557521198654,15.6575534493252,0.681535739998656,1.66257432234928,0,0,0,0,0,0,1.12355536105401,0,0,0,0.704217098883403,0,0,0,0,0,0,0.5709193985953,0,4.89859058913922,0.693941307064543,0.304465478312141,0.691846491768175,0.452167921657868,0.587943535678524,1.75933227861546,0,0,0,0.647067399789637,0,0,0,21.0802173848314,30.1603257811375,0,0,0,0,17.2259235315546,30.652540388848,4.39790232395025,63.2720525499886,96.9161583281953,15.1685272528479,22.8760180925538,0.509196819251581,0,0,2.52530227063769,0.260240885925407,1.14951052216736,2.16074555766419,2.71268672104287,4.08218994907967,4.22775276940004,4.59138450342671,7.76110112217047,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0.536546802799238,0,0,0.656669856316381,0,0.146199987425332,0.439100230582101,0.268412837520744,32.3846520788756,5.86556290561921,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0,0.380451252225118,0,0.658795818896044,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,0,0,1.13800740571849,0.342745537829186,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,27.6147014779002,22.504643825703,0,0,0.315508219416257,0.780877488593277,1.29254038639679,0,0,0,0.404810701674894,0,0.790575555893047,13.8168166061377,0.99358059645788,1.24645922567079,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,0.922305443831782,0.516856586336442,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,2.06271086496374,5.44703369206061,0.18006109403131,0.129358683782755,0.428674070063185,0.532020700926821,0.891844088010353,1.97458824722545,1.8267896946876,0,0,0.220528398054962,0,0.484393280087717,0.180938774784468,0,0,0,28.9263471136395,0,0,0,0,0,0.228778173206523,0.679913719975421,0.139951452323658,0.138199973804424,0,0.158167996790568,0.406638934253697,0.756037385752609,0.418176592028937,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0,2.25477175473676,0.747582730219894,3.97100377097034,4.27792614356905,2.71235629303235,6.08242051766801,3.40335992072686,13.4110516389269,9.54220034273969,4.1069300540421,0.576060012515731,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,12.0377304968487,73.9824913828357,63.9852078744976,71.6119391799246,66.1634752023197,100.022047886514,96.6904188658817,86.4028800296712,101.772591928674,95.6130482956672,104.587582973868,1.45302286617847,1.19707462020309,3.07320490357441,0.729320151204882,1.88651846365184,1.65459157605013,1.33348036680969,1.03017528619447,1.60459604795908,2.02157769411038,0.50695859978048,1.13175804831646,0.842773567228942,1.34452820050225,0.918967503289812,1.42888107384922,1.0429589335037,1.15745532278223,0.824171801606613,0.735994600671987,2.74295401908332,0.70990322463735,0.953744759789284,1.45346416632329,1.41164070622996,1.26921911837515,1.64635175585495,1.05227884575137,0.679020569229309,0.561142271657738,1.66089025373844,0.788035859004508,0.818462086339379,1.54936841185966,1.35034627686799,3.2475375131933,2.10538447600868,0.214871054048298,0.956441660344217,0.441182838239031,0.927471342481686
|short_description=p1@Cabp1
|short_description=p1@Cabp1
}}
}}

Latest revision as of 17:12, 1 October 2015

Short description:p1@Cabp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cabp1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 53bp_to_ENSMUST00000112113_5end
EntrezGene:Cabp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cabp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.45
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.08
cerebellum, neonate N30.CNhs11135.1395-42I230.16
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.23
corpus striatum, adult.CNhs10487.19-21D830.65
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D563.27
cortex, neonate N30.CNhs11107.1392-42F296.92
diencephalon, adult.CNhs10482.20-12F215.17
diencephalon, neonate N30.CNhs11201.1388-42B222.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C64.08
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E832.38
hippocampus, neonate N00.CNhs11228.627-43G15.87
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C227.61
medulla oblongata, neonate N30.CNhs11200.1396-42A322.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I913.82
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C928.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I413.41
testis, neonate N10.CNhs11204.763-44D99.54
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A173.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A263.99
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A371.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D766.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4100.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A596.69
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A686.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7101.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A895.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9104.59
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.29e-1823
neuroblast (sensu Vertebrata)2.29e-1823
neuron2.66e-1133
neuronal stem cell2.66e-1133
neuroblast2.66e-1133
electrically signaling cell2.66e-1133
electrically responsive cell2.14e-0839
electrically active cell2.14e-0839
neural cell1.18e-0743
ectodermal cell2.57e-0744
neurectodermal cell2.57e-0744

Uber anatomy
Ontology termp-valuen
neurectoderm3.59e-3364
neural plate3.59e-3364
presumptive neural plate3.59e-3364
regional part of nervous system1.85e-3154
neural tube5.51e-3052
neural rod5.51e-3052
future spinal cord5.51e-3052
neural keel5.51e-3052
gray matter2.62e-2734
ecto-epithelium1.00e-2673
central nervous system2.50e-2673
nervous system2.98e-2675
pre-chordal neural plate3.69e-2649
brain4.35e-2547
future brain4.35e-2547
ectoderm-derived structure6.58e-2595
ectoderm6.58e-2595
presumptive ectoderm6.58e-2595
regional part of brain3.26e-2446
brain grey matter1.52e-2229
regional part of telencephalon1.52e-2229
telencephalon1.52e-2229
anterior neural tube4.74e-2240
regional part of forebrain3.60e-2139
forebrain3.60e-2139
future forebrain3.60e-2139
structure with developmental contribution from neural crest2.52e-1992
cerebral cortex1.11e-1621
cerebral hemisphere1.11e-1621
pallium1.11e-1621
regional part of cerebral cortex4.20e-1317
occipital lobe3.49e-1210
visual cortex3.49e-1210
neocortex3.49e-1210
posterior neural tube2.73e-0812
chordal neural plate2.73e-0812
basal ganglion5.41e-078
nuclear complex of neuraxis5.41e-078
aggregate regional part of brain5.41e-078
collection of basal ganglia5.41e-078
cerebral subcortex5.41e-078
spinal cord7.09e-076
dorsal region element7.09e-076
dorsum7.09e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:115644292..115644336,-&oldid=4313418"