Personal tools

FFCP PHASE1:Mm9::chr6:72047725..72047745,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20454
|EntrezGene=20454
|HGNC=
|HGNC=
|MCL_coexpression_id=3574
|TSSclassifier=NA
|UniProt=O88829
|UniProt=O88829
|association_with_transcript=118bp_to_ENSMUST00000114112,NM_011375,uc009chz.1_5end
|association_with_transcript=118bp_to_ENSMUST00000114112,NM_011375,uc009chz.1_5end
|cluster_id=chr6:72047725..72047745,+
|description=CAGE_peak_2_at_St3gal5_5end
|description=CAGE_peak_2_at_St3gal5_5end
|id=chr6:72047725..72047745,+
|id=chr6:72047725..72047745,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!1.32e-08!114;UBERON:0004111!1.16e-07!122;UBERON:0002021!1.73e-07!10;UBERON:0000411!1.73e-07!10;UBERON:0001950!1.73e-07!10;UBERON:0000468!3.49e-07!333;UBERON:0005172!6.52e-07!49;UBERON:0005173!6.52e-07!49;UBERON:0002417!6.52e-07!49;UBERON:0000916!6.52e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.42e-08,114;UBERON:0002021,1.50e-07,10;UBERON:0000411,1.50e-07,10;UBERON:0001950,1.50e-07,10;UBERON:0004111,1.63e-07,122;UBERON:0010314,4.29e-07,92;UBERON:0005172,8.04e-07,49;UBERON:0005173,8.04e-07,49;UBERON:0002417,8.04e-07,49;UBERON:0000916,8.04e-07,49
|phase1_expression=16.335182404689,0,0.454999239389536,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0,9.32707333083856,10.9336644390506,13.2916756844348,0.157731082679119,0.137114433605739,0.84877930359606,4.5072943780067,0.595745707205312,0.261199789138935,0,0,0,0,0,0,0,0,8.25539875497521,4.30545351309199,0,0,0,0,0,1.5626706890476,0.523523743973798,1.17646297606203,3.41522742479223,0.971020706062307,1.88845226963366,2.73717714292689,10.4621648732158,1.56478268869608,5.01457859675027,12.0827400503959,7.97162586204562,6.7193482380174,11.5002051491977,0,0,0,2.57259436035947,5.15760191889762,20.1112115988203,3.23706337375356,0.528990979272033,1.90149421051854,2.03306719241479,4.4464739805557,4.04954872776629,0.988866362566974,5.6838409195688,2.69640099466564,5.76327457982332,3.83651565541367,3.91517221161903,3.99617426567626,6.85562362569129,8.1721360152097,1.22490799214954,1.53352753629178,0,2.20231761998777,3.57524546638526,1.84327839907492,2.1101806036831,1.73826522844578,4.68822033501084,1.67509799400829,1.68828783009504,3.36156145108982,9.72274332063103,8.11518580554887,5.21918448310842,1.28734528666413,1.66257432234928,38.8418414860248,7.74381489283248,5.439770669662,1.07940638327563,3.89865850468601,4.03224198387602,4.21333260395256,1.87473354835864,1.29893002301434,0.35333957451034,16.9012103732017,0,0,7.11066703153331,0.865964164044856,0.760079596425296,1.01104889002957,5.1382745873577,0.517875767294343,74.3695116714772,11.9704875468634,19.1813251336649,15.2206228188999,18.2374395068673,22.694620477191,39.8363094515071,4.44950941921873,1.3013942122792,11.4999371753484,5.82360659810673,4.85851340612866,5.33362778448744,7.45567044872489,6.14839673724249,8.79676168616511,0,0.239630249011841,0,0.127070227073065,1.49790639404823,10.980014467647,0.879580464790051,28.3333641913411,25.8272611903634,3.1168206683934,8.76102820565891,6.41587992256993,4.72746488318353,0.505445516867349,2.94618598241064,1.56144531555244,5.28774840196988,2.88099407688559,4.67184935290717,5.78310242786287,5.25266253167884,4.8724896771059,3.10444044886819,2.80238390812695,3.21480336285293,5.27853372491847,6.35667624039967,4.17070873838397,5.57203466435466,3.49829631893504,11.9420560091096,0,0,0,11.5990432619881,12.4298811789981,11.523971933505,9.46978942340841,7.47704080640135,8.33042409591843,7.20855228726264,5.633741429392,4.90414437942112,4.44311594766397,2.46251196118643,3.08061476274252,1.90059983652932,2.63460138349261,6.97873377553933,9.67333763394985,5.35103984372279,0,0.264450566663544,4.26576501070468,5.34144345279009,3.99489130098489,2.62188582010345,4.66993892074228,5.70676878337677,1.42358718463353,3.95277491337626,11.3100843960121,12.5342577385925,15.0122347081723,0,0.432276099749388,0,4.74169752382704,4.56994050438915,3.38123207019241,2.8511185898344,3.49114476901726,2.03393877681924,2.15004226222475,1.18088118383682,1.56998727841375,1.48076596706161,11.5616524563988,3.83743743147016,7.07612382407531,10.5685192820881,12.5773275260872,14.9529839046498,22.1524491049835,40.2774592431135,30.8056930872567,15.1008777253445,11.5014565221884,11.9085103253921,11.8574315783533,7.07220858251913,5.74071723270119,8.68398338454061,2.03228509183265,5.87423376488503,6.19266910479698,6.62005834523234,7.51008794523207,4.69017520837084,6.18913466303636,5.26860849216057,7.72412206120336,5.75808193086815,3.34855014180723,2.45794972073607,2.76295970985433,1.88043776155965,1.50791283939272,2.71952841909355,0,0.275936746304732,1.12385412991454,1.64096361229084,8.19674726883377,10.856249869788,4.10160685241134,2.73307121007647,7.53981892064796,8.60287672629187,8.46634961513098,10.7569081699756,6.07216052512342,7.01414058987149,6.32460444714438,5.14114106274891,49.8209699081023,11.0400674273698,8.63300884573953,2.96946221350564,0,5.09839335925461,2.41858845571801,3.39489143560617,4.13422650033082,2.76691633149535,6.20227903603731,4.36240475373007,4.9909632973861,3.47640433729398,0,1.03135543248187,3.74483566329167,3.78128297465751,8.27895576209629,9.85950361145325,10.2857335512519,5.70780216326626,6.58196082408484,3.34911444026059,0.469343416127421,1.27099242518292,0,1.81374878235628,2.42196640043858,1.14594557363496,0.835606408021955,4.26766339337159,0.874442509889552,2.03967832211561,8.03093139749908,9.90656966223468,12.7784223885101,15.822950388394,11.072232445403,7.77845788902177,0.679913719975421,0.69975726161829,1.10559979043539,0,3.95419991976419,6.70954241518601,3.88819226958485,4.18176592028937,3.9305261474312,3.50647300600534,3.47144514046411,1.83229159388821,7.90651337079936,0.621339313086926,1.12738587736838,21.6798991763769,22.5023547021653,23.1396914129417,23.1196084025139,26.5261117020522,28.5178089909182,26.9523076626977,18.5601039633508,5.31485065817213,4.89651010638371,0,1.62180172232131,1.64337531463724,0.649604114888975,0.895133478337407,0.39736270956253,0,0.295379054349154,0.302899349844443,0.15241361331,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,0.453460767230423,0.887943813496259,0.0897138566094757,0.503653849092235,5.21611903886914,1.68914227906064,5.12824547948342,1.2862102744744,0.501572104035363,18.6368108063632,22.5559365888517,20.0513429703789,20.4505286988988,35.6242910280734,30.215755895588,26.3258775090404,31.9728054289197,35.7982503097522,27.4412965228465,2.07574695168353,7.58147259461959,6.14640980714883,5.59145449257076,5.44994222832754,5.51530525350042,6.44515510624684,8.24140228955577,11.8740107548972,8.33900798820532,9.12525479604863,7.73367999682912,5.99305647807247,5.8262888688431,7.69635284005218,5.71552429539688,7.06894388263618,4.82273051159263,7.41754621445952,8.83193520806384,8.9146005620208,5.6792257970988,5.7224685587357,9.01147783120437,7.0582035311498,7.78454392603424,6.40247905054704,6.05060336307039,7.4692262615224,10.661703161497,7.11810108745045,5.81176446015824,6.95692773388472,8.2116525828562,6.94463799532109,4.74640098082097,5.6143586026898,6.23126056740065,8.22539827896026,5.07360263974886,4.17362104116759
|phase1_expression=16.335182404689,0,0.454999239389536,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0,9.32707333083856,10.9336644390506,13.2916756844348,0.157731082679119,0.137114433605739,0.84877930359606,4.5072943780067,0.595745707205312,0.261199789138935,0,0,0,0,0,0,0,0,8.25539875497521,4.30545351309199,0,0,0,0,0,1.5626706890476,0.523523743973798,1.17646297606203,3.41522742479223,0.971020706062307,1.88845226963366,2.73717714292689,10.4621648732158,1.56478268869608,5.01457859675027,12.0827400503959,7.97162586204562,6.7193482380174,11.5002051491977,0,0,0,2.57259436035947,5.15760191889762,20.1112115988203,3.23706337375356,0.528990979272033,1.90149421051854,2.03306719241479,4.4464739805557,4.04954872776629,0.988866362566974,5.6838409195688,2.69640099466564,5.76327457982332,3.83651565541367,3.91517221161903,3.99617426567626,6.85562362569129,8.1721360152097,1.22490799214954,1.53352753629178,0,2.20231761998777,3.57524546638526,1.84327839907492,2.1101806036831,1.73826522844578,4.68822033501084,1.67509799400829,1.68828783009504,3.36156145108982,9.72274332063103,8.11518580554887,5.21918448310842,1.28734528666413,1.66257432234928,38.8418414860248,7.74381489283248,5.439770669662,1.07940638327563,3.89865850468601,4.03224198387602,4.21333260395256,1.87473354835864,1.29893002301434,0.35333957451034,16.9012103732017,0,0,7.11066703153331,0.865964164044856,0.760079596425296,1.01104889002957,5.1382745873577,0.517875767294343,74.3695116714772,11.9704875468634,19.1813251336649,15.2206228188999,18.2374395068673,22.694620477191,39.8363094515071,4.44950941921873,1.3013942122792,11.4999371753484,5.82360659810673,4.85851340612866,5.33362778448744,7.45567044872489,6.14839673724249,8.79676168616511,0,0.239630249011841,0,0.127070227073065,1.49790639404823,10.980014467647,0.879580464790051,28.3333641913411,25.8272611903634,3.1168206683934,8.76102820565891,6.41587992256993,4.72746488318353,0.505445516867349,2.94618598241064,1.56144531555244,5.28774840196988,2.88099407688559,4.67184935290717,5.78310242786287,5.25266253167884,4.8724896771059,3.10444044886819,2.80238390812695,3.21480336285293,5.27853372491847,6.35667624039967,4.17070873838397,5.57203466435466,3.49829631893504,11.9420560091096,0,0,0,11.5990432619881,12.4298811789981,11.523971933505,9.46978942340841,7.47704080640135,8.33042409591843,7.20855228726264,5.633741429392,4.90414437942112,4.44311594766397,2.46251196118643,3.08061476274252,1.90059983652932,2.63460138349261,6.97873377553933,9.67333763394985,5.35103984372279,0,0.264450566663544,4.26576501070468,5.34144345279009,3.99489130098489,2.62188582010345,4.66993892074228,5.70676878337677,1.42358718463353,3.95277491337626,11.3100843960121,12.5342577385925,15.0122347081723,0,0.432276099749388,0,4.74169752382704,4.56994050438915,3.38123207019241,2.8511185898344,3.49114476901726,2.03393877681924,2.15004226222475,1.18088118383682,1.56998727841375,1.48076596706161,11.5616524563988,3.83743743147016,7.07612382407531,10.5685192820881,12.5773275260872,14.9529839046498,22.1524491049835,40.2774592431135,30.8056930872567,15.1008777253445,11.5014565221884,11.9085103253921,11.8574315783533,7.07220858251913,5.74071723270119,8.68398338454061,2.03228509183265,5.87423376488503,6.19266910479698,6.62005834523234,7.51008794523207,4.69017520837084,6.18913466303636,5.26860849216057,7.72412206120336,5.75808193086815,3.34855014180723,2.45794972073607,2.76295970985433,1.88043776155965,1.50791283939272,2.71952841909355,0,0.275936746304732,1.12385412991454,1.64096361229084,8.19674726883377,10.856249869788,4.10160685241134,2.73307121007647,7.53981892064796,8.60287672629187,8.46634961513098,10.7569081699756,6.07216052512342,7.01414058987149,6.32460444714438,5.14114106274891,49.8209699081023,11.0400674273698,8.63300884573953,2.96946221350564,0,5.09839335925461,2.41858845571801,3.39489143560617,4.13422650033082,2.76691633149535,6.20227903603731,4.36240475373007,4.9909632973861,3.47640433729398,0,1.03135543248187,3.74483566329167,3.78128297465751,8.27895576209629,9.85950361145325,10.2857335512519,5.70780216326626,6.58196082408484,3.34911444026059,0.469343416127421,1.27099242518292,0,1.81374878235628,2.42196640043858,1.14594557363496,0.835606408021955,4.26766339337159,0.874442509889552,2.03967832211561,8.03093139749908,9.90656966223468,12.7784223885101,15.822950388394,11.072232445403,7.77845788902177,0.679913719975421,0.69975726161829,1.10559979043539,0,3.95419991976419,6.70954241518601,3.88819226958485,4.18176592028937,3.9305261474312,3.50647300600534,3.47144514046411,1.83229159388821,7.90651337079936,0.621339313086926,1.12738587736838,21.6798991763769,22.5023547021653,23.1396914129417,23.1196084025139,26.5261117020522,28.5178089909182,26.9523076626977,18.5601039633508,5.31485065817213,4.89651010638371,0,1.62180172232131,1.64337531463724,0.649604114888975,0.895133478337407,0.39736270956253,0,0.295379054349154,0.302899349844443,0.15241361331,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,0.453460767230423,0.887943813496259,0.0897138566094757,0.503653849092235,5.21611903886914,1.68914227906064,5.12824547948342,1.2862102744744,0.501572104035363,18.6368108063632,22.5559365888517,20.0513429703789,20.4505286988988,35.6242910280734,30.215755895588,26.3258775090404,31.9728054289197,35.7982503097522,27.4412965228465,2.07574695168353,7.58147259461959,6.14640980714883,5.59145449257076,5.44994222832754,5.51530525350042,6.44515510624684,8.24140228955577,11.8740107548972,8.33900798820532,9.12525479604863,7.73367999682912,5.99305647807247,5.8262888688431,7.69635284005218,5.71552429539688,7.06894388263618,4.82273051159263,7.41754621445952,8.83193520806384,8.9146005620208,5.6792257970988,5.7224685587357,9.01147783120437,7.0582035311498,7.78454392603424,6.40247905054704,6.05060336307039,7.4692262615224,10.661703161497,7.11810108745045,5.81176446015824,6.95692773388472,8.2116525828562,6.94463799532109,4.74640098082097,5.6143586026898,6.23126056740065,8.22539827896026,5.07360263974886,4.17362104116759
|short_description=p2@St3gal5
|short_description=p2@St3gal5
}}
}}

Latest revision as of 17:04, 1 October 2015

Short description:p2@St3gal5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_St3gal5_5end
Coexpression cluster:MCL_coexpression_mm9:3574
Association with transcript: 118bp_to_ENSMUST00000114112, NM_011375, uc009chz.1_5end
EntrezGene:St3gal5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@St3gal5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.93
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.46
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.72
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.11
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D774.37
adrenal gland, embryo E14.CNhs11038.406-44C511.97
adrenal gland, embryo E16.CNhs11004.1254-43D619.18
adrenal gland, embryo E17.CNhs11043.1263-45I115.22
adrenal gland, embryo E18.CNhs11026.1262-18F518.24
adrenal gland, neonate N00.CNhs11191.1311-23C122.69
adrenal gland, neonate N25.CNhs11223.1377-27I339.84
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I28.80
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D528.33
cortex, neonate N30.CNhs11107.1392-42F225.83
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.42
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C65.78
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A86.36
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I611.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E911.60
heart, embryo E12.CNhs11015.353-12F512.43
heart, embryo E13.CNhs11013.376-3I911.52
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C87.48
heart, embryo E16.CNhs11021.457-17C68.33
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E34.90
heart, neonate N03.CNhs11221.1349-25I24.44
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D26.98
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F212.53
intestine, neonate N10.CNhs11098.755-23A515.01
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F84.57
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G72.03
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B211.56
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H67.08
liver, embryo E14.CNhs10594.409-16E110.57
liver, embryo E15.CNhs10520.433-16D712.58
liver, embryo E16.CNhs10523.462-17F514.95
liver, embryo E17.CNhs10510.481-18A322.15
liver, embryo E18.CNhs10579.499-43G440.28
liver, neonate N00.CNhs11117.641-24F430.81
liver, neonate N03.CNhs11123.1345-25G215.10
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B911.86
liver, neonate N20.CNhs11220.823-25A37.07
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C56.62
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E57.72
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.20
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.76
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I749.82
ovary, embryo E18.CNhs11040.505-44H711.04
ovary, neonate N00.CNhs11217.1299-22I48.63
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C78.28
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B910.29
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C19.91
spleen, embryo E18.CNhs11011.1271-21F212.78
spleen, neonate N10.CNhs11116.752-24D115.82
spleen, neonate N20.CNhs11112.824-19H111.07
spleen, neonate N25.CNhs11099.1354-25G37.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A93.47
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I17.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F521.68
testis, embryo E15.CNhs11034.443-27C522.50
testis, embryo E16.CNhs11033.470-26G523.14
testis, embryo E17.CNhs11029.486-18I523.12
testis, embryo E18.CNhs11027.503-18G526.53
testis, neonate N00.CNhs11189.1300-22B728.52
testis, neonate N07.CNhs11222.726-26I426.95
testis, neonate N10.CNhs11204.763-44D918.56
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A435.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.21
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C68.23
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube1.42e-08114
occipital lobe1.50e-0710
visual cortex1.50e-0710
neocortex1.50e-0710
anatomical conduit1.63e-07122
structure with developmental contribution from neural crest4.29e-0792
abdomen element8.04e-0749
abdominal segment element8.04e-0749
abdominal segment of trunk8.04e-0749
abdomen8.04e-0749
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:72047725..72047745,%2B&oldid=4313092"