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FFCP PHASE1:Mm9::chr13:49415588..49415658,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr13:49415588..49415658,-
|DHSsupport=NA
|short_description=p1@Fgd3
|DPIdataset=NA
|description=CAGE_peak_1_at_Fgd3_5end
|association_with_transcript=21bp_to_ENSMUST00000110086,uc007qje.1_5end
|EntrezGene=30938
|EntrezGene=30938
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=O88842
|UniProt=O88842
|association_with_transcript=21bp_to_ENSMUST00000110086,uc007qje.1_5end
|cluster_id=chr13:49415588..49415658,-
|description=CAGE_peak_1_at_Fgd3_5end
|id=chr13:49415588..49415658,-
|ontology_enrichment_celltype=CL:0002319!4.93e-18!43;CL:0000221!5.16e-18!44;CL:0000133!5.16e-18!44;CL:0000055!1.44e-17!50;CL:0000393!7.88e-14!39;CL:0000211!7.88e-14!39;CL:0000540!2.06e-13!33;CL:0000047!2.06e-13!33;CL:0000031!2.06e-13!33;CL:0000404!2.06e-13!33;CL:0000117!5.24e-13!23;CL:0000337!5.24e-13!23;CL:0002321!1.75e-11!70;CL:0000220!1.75e-11!70
|ontology_enrichment_celltype_v019_2=CL:0002319,8.58e-21,43;CL:0000221,9.05e-21,44;CL:0000133,9.05e-21,44;CL:0002321,3.03e-15,70;CL:0000393,3.20e-15,39;CL:0000211,3.20e-15,39;CL:0000540,3.90e-15,33;CL:0000047,3.90e-15,33;CL:0000031,3.90e-15,33;CL:0000404,3.90e-15,33;CL:0000117,5.97e-15,23;CL:0000337,5.97e-15,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.35e-32!75;UBERON:0001016!7.35e-32!75;UBERON:0004121!1.03e-30!102;UBERON:0000924!1.03e-30!102;UBERON:0006601!1.03e-30!102;UBERON:0001017!2.45e-30!73;UBERON:0005743!2.45e-30!73;UBERON:0002346!4.19e-25!71;UBERON:0003075!4.19e-25!71;UBERON:0007284!4.19e-25!71;UBERON:0000033!1.46e-22!63;UBERON:0001049!2.63e-22!52;UBERON:0005068!2.63e-22!52;UBERON:0006241!2.63e-22!52;UBERON:0007135!2.63e-22!52;UBERON:0000955!9.86e-22!50;UBERON:0006238!9.86e-22!50;UBERON:0002616!5.32e-21!49;UBERON:0003056!6.27e-19!49;UBERON:0002020!2.88e-17!34;UBERON:0003080!2.95e-17!40;UBERON:0002780!9.45e-17!39;UBERON:0001890!9.45e-17!39;UBERON:0006240!9.45e-17!39;UBERON:0002791!5.72e-15!29;UBERON:0003528!5.72e-15!29;UBERON:0001893!5.72e-15!29;UBERON:0007811!2.12e-11!86;UBERON:0000153!1.12e-10!94;UBERON:0000956!1.37e-10!21;UBERON:0001869!1.37e-10!21;UBERON:0000203!1.37e-10!21;UBERON:0002619!6.09e-09!17
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.85e-37,75;UBERON:0001017,1.75e-35,73;UBERON:0004121,2.43e-33,95;UBERON:0000924,2.43e-33,95;UBERON:0006601,2.43e-33,95;UBERON:0002346,1.26e-28,64;UBERON:0003075,1.26e-28,64;UBERON:0007284,1.26e-28,64;UBERON:0000073,8.45e-28,54;UBERON:0001049,2.20e-26,52;UBERON:0005068,2.20e-26,52;UBERON:0006241,2.20e-26,52;UBERON:0007135,2.20e-26,52;UBERON:0000955,1.45e-23,47;UBERON:0006238,1.45e-23,47;UBERON:0002616,1.02e-22,46;UBERON:0010371,1.45e-22,73;UBERON:0003056,3.88e-22,49;UBERON:0003080,3.45e-20,40;UBERON:0002020,6.17e-20,34;UBERON:0010314,1.26e-19,92;UBERON:0002780,1.35e-19,39;UBERON:0001890,1.35e-19,39;UBERON:0006240,1.35e-19,39;UBERON:0003528,3.02e-17,29;UBERON:0002791,3.02e-17,29;UBERON:0001893,3.02e-17,29;UBERON:0000956,4.01e-12,21;UBERON:0001869,4.01e-12,21;UBERON:0000203,4.01e-12,21;UBERON:0002619,3.39e-10,17
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,1.61582251287033,1.09220046320974,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,2.93993100536592,11.9305388905093,0,14.3896603211095,18.2339531669612,27.414615769474,3.91961980551015,11.5002051491977,0,0,0,1.02903774414379,0.286533439938757,1.03134418455488,5.66486090406874,5.28990979272033,8.87363964908651,0.677689064138264,0.889294796111139,2.2497492932035,1.97773272513395,2.1314403448383,10.7856039786626,7.30014780110954,5.49554945234932,6.75029691658453,4.83747411108179,4.85606673486466,6.40518768759679,12.8615339175702,9.58454710182364,23.8996884518605,9.91042928994498,6.63974158042976,7.83393319606842,10.1552441552249,9.97215315266265,9.37644067002168,6.70039197603314,4.50210088025344,7.18151764551008,5.89257170947335,5.12538050876771,5.77838282058432,7.95125029998433,24.9386148352392,0,0,0,0,0,0,0.983110940922263,12.1005529030421,8.05336614268893,7.77347063922748,1.69012103732017,25.6652954828636,10.1922095882658,35.5533351576666,2.81438353314578,5.06719730950197,3.53867111510348,0.11418387971906,0,4.30482203287992,1.04091196059682,1.21786191324856,2.07553947530453,1.95939432718409,1.64624189989987,2.51333182659351,0.247194967734374,0,0,1.94120219936891,1.54589062922275,1.93950101254089,0,7.31951992528868,7.33063473847093,0,0,0,0,5.99162557619291,5.49000723382352,15.9581027183338,4.51943232499919,5.8814555185976,8.51930982694196,6.48965052271031,0.407357455401265,1.49288364732112,0,1.26265113531884,2.86264974517948,2.98872735763515,1.98068342785884,2.41127708537144,3.6739709541717,3.07472928683639,2.99845518591132,1.81092359517311,1.5089759505299,2.45837904218165,1.75951124163949,0.657587197282725,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,1.03562886267751,0.703578179943289,0.36012412292203,0.710234206755631,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0.146199987425332,0,0,2.3131894342054,12.8630765474106,0,0,1.91959425481711,1.85789337488351,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0,0.379335801906163,0.685491075658373,0,0,0.193952487167626,0.140271639780637,0.379419222745544,0.885660887877613,0.784993639206874,0.740382983530803,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0.757965647081939,1.95557971730431,0.509235257325564,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,1.08781136763742,0,0,8.66973185934077,5.62616095642575,4.59017847054691,1.51482556322624,2.2085575359138,1.17131623288992,1.50796378412959,2.15071918157297,7.5751549188014,12.4553673547086,1.21443210502468,1.46127928955656,2.37172666767914,13.4954952897159,6.38730383437209,0.178065603667255,0.325773918707152,0.494910368917606,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0,0,0,0,0,4.32146625675145,5.56242340265844,3.85806663056866,2.30542303734956,1.78368817602071,3.29098041204242,2.74018454203139,0,0,0.220528398054962,0.8244312647074,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,9.27126510052548,0.512612642393558,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0.954670618015114,1.89801596148681,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,1.69107881605257,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.469428954583016,0.13020438484395,0.209718688851422,0.483168241652012,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,4.30787728868902,0,0.0897138566094757,0.335769232728157,0,0.563047426353546,0.73260649706906,0.428736758158132,0,3.95326289831947,5.52390283808612,4.58316410751517,5.15559547031063,8.90607275701835,5.2877572817279,4.72515750162264,1.80128481289688,7.25027854374727,3.10656187051092,1.3492355185943,3.99024873401031,3.24393850932855,1.94485373654635,2.93458427679175,3.12533964365024,1.33348036680969,2.47242068686673,2.24643446714271,2.77966932940177,2.5347929989024,1.88626341386076,2.62196220915671,2.30490548657529,1.83793500657962,4.28664322154766,2.0859178670074,0.964546102318525,0.824171801606613,2.06078488188156,3.08582327146874,1.4198064492747,1.43061713968393,2.61623549938191,1.31753132581463,2.36920902096694,2.0122077016005,2.36762740294059,2.8518863907631,3.36685362994643,1.89816028998679,1.18205378850676,2.45538625901814,1.85924209423159,2.70069255373598,3.99696924700713,2.33931608445408,2.36358159453128,0.956441660344217,0.220591419119515,3.01428186306548
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,1.61582251287033,1.09220046320974,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,2.93993100536592,11.9305388905093,0,14.3896603211095,18.2339531669612,27.414615769474,3.91961980551015,11.5002051491977,0,0,0,1.02903774414379,0.286533439938757,1.03134418455488,5.66486090406874,5.28990979272033,8.87363964908651,0.677689064138264,0.889294796111139,2.2497492932035,1.97773272513395,2.1314403448383,10.7856039786626,7.30014780110954,5.49554945234932,6.75029691658453,4.83747411108179,4.85606673486466,6.40518768759679,12.8615339175702,9.58454710182364,23.8996884518605,9.91042928994498,6.63974158042976,7.83393319606842,10.1552441552249,9.97215315266265,9.37644067002168,6.70039197603314,4.50210088025344,7.18151764551008,5.89257170947335,5.12538050876771,5.77838282058432,7.95125029998433,24.9386148352392,0,0,0,0,0,0,0.983110940922263,12.1005529030421,8.05336614268893,7.77347063922748,1.69012103732017,25.6652954828636,10.1922095882658,35.5533351576666,2.81438353314578,5.06719730950197,3.53867111510348,0.11418387971906,0,4.30482203287992,1.04091196059682,1.21786191324856,2.07553947530453,1.95939432718409,1.64624189989987,2.51333182659351,0.247194967734374,0,0,1.94120219936891,1.54589062922275,1.93950101254089,0,7.31951992528868,7.33063473847093,0,0,0,0,5.99162557619291,5.49000723382352,15.9581027183338,4.51943232499919,5.8814555185976,8.51930982694196,6.48965052271031,0.407357455401265,1.49288364732112,0,1.26265113531884,2.86264974517948,2.98872735763515,1.98068342785884,2.41127708537144,3.6739709541717,3.07472928683639,2.99845518591132,1.81092359517311,1.5089759505299,2.45837904218165,1.75951124163949,0.657587197282725,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,1.03562886267751,0.703578179943289,0.36012412292203,0.710234206755631,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0.146199987425332,0,0,2.3131894342054,12.8630765474106,0,0,1.91959425481711,1.85789337488351,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0,0.379335801906163,0.685491075658373,0,0,0.193952487167626,0.140271639780637,0.379419222745544,0.885660887877613,0.784993639206874,0.740382983530803,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0.757965647081939,1.95557971730431,0.509235257325564,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,1.08781136763742,0,0,8.66973185934077,5.62616095642575,4.59017847054691,1.51482556322624,2.2085575359138,1.17131623288992,1.50796378412959,2.15071918157297,7.5751549188014,12.4553673547086,1.21443210502468,1.46127928955656,2.37172666767914,13.4954952897159,6.38730383437209,0.178065603667255,0.325773918707152,0.494910368917606,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0,0,0,0,0,4.32146625675145,5.56242340265844,3.85806663056866,2.30542303734956,1.78368817602071,3.29098041204242,2.74018454203139,0,0,0.220528398054962,0.8244312647074,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,9.27126510052548,0.512612642393558,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0.954670618015114,1.89801596148681,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,1.69107881605257,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.469428954583016,0.13020438484395,0.209718688851422,0.483168241652012,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,4.30787728868902,0,0.0897138566094757,0.335769232728157,0,0.563047426353546,0.73260649706906,0.428736758158132,0,3.95326289831947,5.52390283808612,4.58316410751517,5.15559547031063,8.90607275701835,5.2877572817279,4.72515750162264,1.80128481289688,7.25027854374727,3.10656187051092,1.3492355185943,3.99024873401031,3.24393850932855,1.94485373654635,2.93458427679175,3.12533964365024,1.33348036680969,2.47242068686673,2.24643446714271,2.77966932940177,2.5347929989024,1.88626341386076,2.62196220915671,2.30490548657529,1.83793500657962,4.28664322154766,2.0859178670074,0.964546102318525,0.824171801606613,2.06078488188156,3.08582327146874,1.4198064492747,1.43061713968393,2.61623549938191,1.31753132581463,2.36920902096694,2.0122077016005,2.36762740294059,2.8518863907631,3.36685362994643,1.89816028998679,1.18205378850676,2.45538625901814,1.85924209423159,2.70069255373598,3.99696924700713,2.33931608445408,2.36358159453128,0.956441660344217,0.220591419119515,3.01428186306548
|short_description=p1@Fgd3
}}
}}

Latest revision as of 16:58, 1 October 2015

Short description:p1@Fgd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fgd3_5end
Coexpression cluster:NA
Association with transcript: 21bp_to_ENSMUST00000110086, uc007qje.1_5end
EntrezGene:Fgd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Fgd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.93
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.41
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C810.79
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D623.90
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D97.95
Mouse Schwann, donor2.CNhs12573.11746-123F924.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F115.96
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F28.52
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G83.00
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G112.86
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.67
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E64.32
pituitary gland, embryo E13.CNhs11009.370-44C75.56
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell8.58e-2143
ectodermal cell9.05e-2144
neurectodermal cell9.05e-2144
embryonic cell3.03e-1570
electrically responsive cell3.20e-1539
electrically active cell3.20e-1539
neuron3.90e-1533
neuronal stem cell3.90e-1533
neuroblast3.90e-1533
electrically signaling cell3.90e-1533
CNS neuron (sensu Vertebrata)5.97e-1523
neuroblast (sensu Vertebrata)5.97e-1523

Uber anatomy
Ontology termp-valuen
nervous system2.85e-3775
central nervous system1.75e-3573
ectoderm-derived structure2.43e-3395
ectoderm2.43e-3395
presumptive ectoderm2.43e-3395
neurectoderm1.26e-2864
neural plate1.26e-2864
presumptive neural plate1.26e-2864
regional part of nervous system8.45e-2854
neural tube2.20e-2652
neural rod2.20e-2652
future spinal cord2.20e-2652
neural keel2.20e-2652
brain1.45e-2347
future brain1.45e-2347
regional part of brain1.02e-2246
ecto-epithelium1.45e-2273
pre-chordal neural plate3.88e-2249
anterior neural tube3.45e-2040
gray matter6.17e-2034
structure with developmental contribution from neural crest1.26e-1992
regional part of forebrain1.35e-1939
forebrain1.35e-1939
future forebrain1.35e-1939
brain grey matter3.02e-1729
regional part of telencephalon3.02e-1729
telencephalon3.02e-1729
cerebral cortex4.01e-1221
cerebral hemisphere4.01e-1221
pallium4.01e-1221
regional part of cerebral cortex3.39e-1017
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