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FFCP PHASE1:Mm9::chrX:149204143..149204192,-: Difference between revisions

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{{FFCP|EntrezGene=110380|HGNC=|UniProt=A2ALU4|association_with_transcript=-135bp_to_ENSMUST00000062317_5end|description=CAGE_peak_1_at_Shroom2_5end|id=chrX:149204143..149204192,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!8.29e-14!85;UBERON:0000466!5.96e-12!79;UBERON:0009569!9.62e-12!66;UBERON:0002100!4.16e-11!98;UBERON:0000160!2.58e-09!43;UBERON:0005153!4.73e-09!17;UBERON:0002048!9.58e-09!14;UBERON:0000117!9.58e-09!14;UBERON:0000171!9.58e-09!14;UBERON:0000170!9.58e-09!14;UBERON:0005597!9.58e-09!14;UBERON:0000118!9.58e-09!14;UBERON:0005409!2.68e-08!59;UBERON:0004119!2.96e-08!130;UBERON:0000925!2.96e-08!130;UBERON:0006595!2.96e-08!130;UBERON:0000468!4.70e-08!333;UBERON:0000464!8.31e-08!57;UBERON:0004921!9.64e-08!126;UBERON:0004185!9.64e-08!126;UBERON:0000922!1.09e-07!328;UBERON:0001007!1.37e-07!128;UBERON:0001555!1.37e-07!128;UBERON:0007026!1.37e-07!128;UBERON:0005178!7.76e-07!17;UBERON:0005181!7.76e-07!17;UBERON:0002224!7.76e-07!17;UBERON:0000915!7.76e-07!17;UBERON:0008947!7.76e-07!17;UBERON:0003258!7.76e-07!17;UBERON:0005157!8.28e-07!27;UBERON:0000481!8.37e-07!230|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.08e-15,79;UBERON:0002100,7.32e-12,90;UBERON:0009569,1.16e-11,66;UBERON:0005153,4.68e-09,17;UBERON:0002048,9.50e-09,14;UBERON:0000117,9.50e-09,14;UBERON:0000171,9.50e-09,14;UBERON:0000170,9.50e-09,14;UBERON:0005597,9.50e-09,14;UBERON:0000118,9.50e-09,14;UBERON:0005157,2.49e-07,20;UBERON:0005178,7.71e-07,17;UBERON:0005181,7.71e-07,17;UBERON:0002224,7.71e-07,17;UBERON:0000915,7.71e-07,17;UBERON:0008947,7.71e-07,17;UBERON:0003258,7.71e-07,17|phase1_expression=22.5809874417759,16.0528687514106,18.1999695755814,19.660173734944,13.023288978605,23.6709773395765,17.0537227634734,0,0,0,0,0,0,0,1.99865857089398,0.404950534779652,0,0,0,0,10.6304112688837,0,0,9.91953021319121,6.65286915094793,17.8011908875656,15.9381938578858,12.2818602630957,8.55105387553682,10.837295579677,11.0865255327652,0,0,0,10.3986583110459,10.472782657585,16.7418872135143,0,0,0,0,0,0,3.27331726736501,2.63580021170738,4.58866880404204,7.04152209913235,9.81113203712009,13.8402295122717,17.6931208157598,6.43937539476668,5.75010257459886,0,0,0,6.43148590089868,6.5902691185914,17.532851137433,2.63011399117477,3.70293685490423,3.1691570175309,7.11573517345177,10.6715375533337,0,0,0,10.4860038681442,11.5265491596466,6.53244557543409,5.94026128659439,3.78584930432488,6.56997264128748,5.30084498283872,5.26710436624302,4.60058260887535,1.83843757322004,7.70811166995721,4.72443150915195,5.68344173048101,3.29715719325485,3.47653045689157,6.77187381723788,4.4669279840221,8.4414391504752,7.94550888439413,10.3120004915784,6.54909731675874,4.10078780815661,0.908714319998209,1.28471652181535,75.6546315511379,26.673140186423,4.0798280022465,12.9528765993076,29.8897152025928,19.7131830322828,9.83110940922263,0,0,0,13.8026551381147,0,0,0,6.71122227134764,7.85415582972806,6.57181778519218,15.8715592809493,2.58937883647172,7.12522267511159,9.02123699183906,13.0920155674221,12.6838523490832,13.1128697280782,17.1679512418129,5.6549966098354,39.7983898052342,5.49477556295664,2.65383165584962,6.30890714794896,5.30019644304944,4.363877278217,20.5030937339934,4.09893115816166,3.77004072264219,13.2837668708468,0,0,0,5.69204429738326,5.03250663100489,3.8952849154988,4.69325664519146,6.64860189058859,8.10373373782284,6.16516799657479,12.0170449343373,9.82815067819735,17.6905930903572,9.89076722666428,12.4915625244196,8.04657365517155,7.38254732201932,8.59017461663576,11.6342413548771,6.91814089538189,6.55912071918102,13.9699820199068,6.68260778091811,9.07709184805532,10.0292140773451,8.54863356467542,13.0682207136031,8.00979983000983,11.9353639116607,20.5005294823048,0,0,0,15.1201813950916,16.4168241986767,11.1638478105829,16.8088762265499,17.1184881620241,14.6553757243009,16.0448421877781,15.0233104783787,17.5148013550754,7.89887279584706,8.53670813211295,9.72825714550269,7.60239934611728,5.92785311285837,9.12603647570528,6.09840850835969,6.89460902941206,15.8601015832223,14.5447811664949,10.6644125267617,13.4697269679054,13.2733485161756,13.5127961497639,11.3412802360884,15.978952593455,14.7104009078799,9.55253937399263,16.0854533632172,12.9321706826748,13.2575579241002,7.19055526923377,13.1844210423563,10.5544874824815,7.58671603812327,13.481324487948,16.9061603509621,18.3286195060783,16.8738663835834,22.3031907251213,25.6107975353242,27.6030976721856,22.2938193534752,18.8797660800355,24.9020206753205,10.0107063429656,6.2898878436225,7.42044970870017,6.49152388443209,8.44120059133459,8.14802725700543,12.6586300478357,16.2135226775035,10.9824565275233,35.9420516318386,28.2827120228063,29.3315412727687,37.3816739361725,26.7302146147649,15.4381926836277,16.0735275444946,16.6752442358027,18.2520773615069,18.1627241779451,23.9384053254272,32.9987327160377,37.8489389008762,39.2218632194176,20.4925687338048,18.8244986201459,25.8316725225129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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=110380
|HGNC=
|TSSclassifier=NA
|UniProt=A2ALU4
|association_with_transcript=-135bp_to_ENSMUST00000062317_5end
|cluster_id=chrX:149204143..149204192,-
|description=CAGE_peak_1_at_Shroom2_5end
|id=chrX:149204143..149204192,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.08e-15,79;UBERON:0002100,7.32e-12,90;UBERON:0009569,1.16e-11,66;UBERON:0005153,4.68e-09,17;UBERON:0002048,9.50e-09,14;UBERON:0000117,9.50e-09,14;UBERON:0000171,9.50e-09,14;UBERON:0000170,9.50e-09,14;UBERON:0005597,9.50e-09,14;UBERON:0000118,9.50e-09,14;UBERON:0005157,2.49e-07,20;UBERON:0005178,7.71e-07,17;UBERON:0005181,7.71e-07,17;UBERON:0002224,7.71e-07,17;UBERON:0000915,7.71e-07,17;UBERON:0008947,7.71e-07,17;UBERON:0003258,7.71e-07,17
|phase1_expression=22.5809874417759,16.0528687514106,18.1999695755814,19.660173734944,13.023288978605,23.6709773395765,17.0537227634734,0,0,0,0,0,0,0,1.99865857089398,0.404950534779652,0,0,0,0,10.6304112688837,0,0,9.91953021319121,6.65286915094793,17.8011908875656,15.9381938578858,12.2818602630957,8.55105387553682,10.837295579677,11.0865255327652,0,0,0,10.3986583110459,10.472782657585,16.7418872135143,0,0,0,0,0,0,3.27331726736501,2.63580021170738,4.58866880404204,7.04152209913235,9.81113203712009,13.8402295122717,17.6931208157598,6.43937539476668,5.75010257459886,0,0,0,6.43148590089868,6.5902691185914,17.532851137433,2.63011399117477,3.70293685490423,3.1691570175309,7.11573517345177,10.6715375533337,0,0,0,10.4860038681442,11.5265491596466,6.53244557543409,5.94026128659439,3.78584930432488,6.56997264128748,5.30084498283872,5.26710436624302,4.60058260887535,1.83843757322004,7.70811166995721,4.72443150915195,5.68344173048101,3.29715719325485,3.47653045689157,6.77187381723788,4.4669279840221,8.4414391504752,7.94550888439413,10.3120004915784,6.54909731675874,4.10078780815661,0.908714319998209,1.28471652181535,75.6546315511379,26.673140186423,4.0798280022465,12.9528765993076,29.8897152025928,19.7131830322828,9.83110940922263,0,0,0,13.8026551381147,0,0,0,6.71122227134764,7.85415582972806,6.57181778519218,15.8715592809493,2.58937883647172,7.12522267511159,9.02123699183906,13.0920155674221,12.6838523490832,13.1128697280782,17.1679512418129,5.6549966098354,39.7983898052342,5.49477556295664,2.65383165584962,6.30890714794896,5.30019644304944,4.363877278217,20.5030937339934,4.09893115816166,3.77004072264219,13.2837668708468,0,0,0,5.69204429738326,5.03250663100489,3.8952849154988,4.69325664519146,6.64860189058859,8.10373373782284,6.16516799657479,12.0170449343373,9.82815067819735,17.6905930903572,9.89076722666428,12.4915625244196,8.04657365517155,7.38254732201932,8.59017461663576,11.6342413548771,6.91814089538189,6.55912071918102,13.9699820199068,6.68260778091811,9.07709184805532,10.0292140773451,8.54863356467542,13.0682207136031,8.00979983000983,11.9353639116607,20.5005294823048,0,0,0,15.1201813950916,16.4168241986767,11.1638478105829,16.8088762265499,17.1184881620241,14.6553757243009,16.0448421877781,15.0233104783787,17.5148013550754,7.89887279584706,8.53670813211295,9.72825714550269,7.60239934611728,5.92785311285837,9.12603647570528,6.09840850835969,6.89460902941206,15.8601015832223,14.5447811664949,10.6644125267617,13.4697269679054,13.2733485161756,13.5127961497639,11.3412802360884,15.978952593455,14.7104009078799,9.55253937399263,16.0854533632172,12.9321706826748,13.2575579241002,7.19055526923377,13.1844210423563,10.5544874824815,7.58671603812327,13.481324487948,16.9061603509621,18.3286195060783,16.8738663835834,22.3031907251213,25.6107975353242,27.6030976721856,22.2938193534752,18.8797660800355,24.9020206753205,10.0107063429656,6.2898878436225,7.42044970870017,6.49152388443209,8.44120059133459,8.14802725700543,12.6586300478357,16.2135226775035,10.9824565275233,35.9420516318386,28.2827120228063,29.3315412727687,37.3816739361725,26.7302146147649,15.4381926836277,16.0735275444946,16.6752442358027,18.2520773615069,18.1627241779451,23.9384053254272,32.9987327160377,37.8489389008762,39.2218632194176,20.4925687338048,18.8244986201459,25.8316725225129,24.0879072632135,20.0314578964439,29.6530570092099,0,0,14.2611639175521,11.8652800911035,9.47248480927973,8.20481806145422,0,4.03953483526997,9.14973836307144,7.41833614163613,4.30846795465598,5.4962823529087,6.90675889655422,5.37845408498782,8.90583543684768,7.59865230569411,5.13874111330481,5.46246237917072,17.7425106510336,15.8478387263857,21.0124177566113,27.5500105364134,21.2392221343941,15.0523994416088,11.4882951646605,17.9174825768103,15.3556984298002,15.6791925451403,18.3484088149437,17.4496190149203,13.9033977570041,17.3820216864699,18.9753495434998,17.5330423521918,10.2131881726136,12.4242154881604,12.0303575917962,10.7168517515796,17.0246624296583,15.161349496176,13.3284706687718,14.6143175575008,18.7737366450968,19.2767184486076,16.5396298541221,9.39851641766436,12.5942252822806,8.14224486530104,9.66915986425405,12.3105674808796,14.5740418314925,7.04616147639937,1.87957968877638,12.7959858137198,12.5932278611404,2.63715839806567,0.956859594047176,1.83022538565218,0.169978429993855,0.139951452323658,0,10.5013767981662,10.597255784968,18.5020715085432,10.5845234005365,12.3362094648537,14.1935666435015,10.9240120571705,14.4643547519338,15.7053565190418,10.628427809927,27.9602690889117,2.25477175473676,19.1381178936293,10.2584264083401,8.94475466382619,7.62042958518613,9.2925869019928,11.9704383418669,7.16124116641726,7.65473214307689,4.83168241652012,4.60848010012585,2.21207784439725,9.12263468805739,6.47079030138412,3.63778304337826,3.75956060901711,3.57626438606277,2.28371354087941,1.03382669022204,1.9183625490148,2.13379058634,1.41156659191577,1.75424185331554,2.79014340756955,1.63627663054197,3.62768613784338,9.98936790183291,6.2799699626633,6.71538465456314,8.69353173144857,21.0204372505324,17.5825559296574,6.85978813053011,13.5424468089548,3.3885110557024,5.52390283808612,3.43737308063638,2.92150409984269,2.05524755931193,5.2877572817279,2.02506750069542,1.80128481289688,4.07828168085784,3.10656187051092,4.98179268404048,7.58147259461959,7.85374586469017,8.75184181445858,6.91723436672342,8.82448840560068,9.11211583986622,11.743998262617,12.5158491740808,11.8767689528985,11.1530891951705,11.5062068245506,11.7051884337353,13.1251562429982,12.2337548875456,9.0495801343784,10.7772423128716,11.1887347868949,11.5384052224926,14.4254941731709,10.9718160763333,12.7782580434723,8.82213902805088,10.3195955808953,12.3283288344083,13.1998788311015,13.9025259383307,11.5750673032651,12.0865661322817,11.7839877048125,13.9989321386525,11.9190423674432,10.6400071224119,14.4091262302948,13.696369379661,7.74412791607632,11.6965804222704,11.1732948105115,10.3295699317175,6.83833399270498,5.33296021926969
|short_description=p1@Shroom2
}}

Latest revision as of 16:55, 1 October 2015

Short description:p1@Shroom2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shroom2_5end
Coexpression cluster:NA
Association with transcript: -135bp_to_ENSMUST00000062317_5end
EntrezGene:Shroom2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Shroom2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.66
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I115.94
GP2+ M cell, pool3.CNhs13240.11847-124I212.28
Ileum epithelium, pool1.CNhs13199.10252-104B98.55
Ileum epithelium, pool2.CNhs13232.10253-104C110.84
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.84
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.43
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.53
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G375.65
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F726.67
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F429.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.87
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D77.13
adrenal gland, embryo E14.CNhs11038.406-44C59.02
adrenal gland, embryo E16.CNhs11004.1254-43D613.09
adrenal gland, embryo E17.CNhs11043.1263-45I112.68
adrenal gland, embryo E18.CNhs11026.1262-18F513.11
adrenal gland, neonate N00.CNhs11191.1311-23C117.17
adrenal gland, neonate N25.CNhs11223.1377-27I35.65
amnion, adult pregnant day17.5.CNhs10488.583-22A839.80
aorta, adult.CNhs10498.46-23H15.49
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F56.31
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H713.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.83
epididymis, adult.CNhs10490.58-23B217.69
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C612.49
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D48.59
eyeball, neonate N00.CNhs11207.633-15C611.63
eyeball, neonate N01.CNhs11140.1532-43E76.92
eyeball, neonate N02.CNhs11205.1551-44G86.56
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E26.68
forelimb, embryo E12.CNhs10600.359-14H29.08
forelimb, embryo E13.CNhs10589.384-1E210.03
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E713.07
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B511.94
gonad, embryo E13.CNhs11044.1564-45I620.50
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E915.12
heart, embryo E12.CNhs11015.353-12F516.42
heart, embryo E13.CNhs11013.376-3I911.16
heart, embryo E14.CNhs10597.403-26D416.81
heart, embryo E15.CNhs11017.431-16C817.12
heart, embryo E16.CNhs11021.457-17C614.66
heart, embryo E17.CNhs11025.479-18E516.04
heart, embryo E18.CNhs11030.1283-20G315.02
heart, neonate N00.CNhs11213.639-21E317.51
heart, neonate N03.CNhs11221.1349-25I27.90
heart, neonate N10.CNhs11118.749-24G18.54
heart, neonate N16.CNhs11209.782-15G19.73
heart, neonate N20.CNhs11127.821-26I67.60
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D29.13
hippocampus, adult.CNhs10478.13-16E86.10
hippocampus, neonate N00.CNhs11228.627-43G16.89
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A314.54
intestine, embryo E12.CNhs11019.1251-16I510.66
intestine, embryo E13.CNhs11010.381-16D513.47
intestine, embryo E15.CNhs10602.976-16D813.27
intestine, embryo E16.CNhs10585.463-22H413.51
intestine, embryo E17.CNhs10582.482-18D311.34
intestine, embryo E18.CNhs10526.1289-20F715.98
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E99.55
intestine, neonate N06.CNhs11102.688-20B816.09
intestine, neonate N07.CNhs11095.720-20F212.93
intestine, neonate N10.CNhs11098.755-23A513.26
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E313.18
intestine, neonate N30.CNhs11131.1384-42G110.55
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F813.48
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I218.33
kidney, embryo E18.CNhs11001.1288-20C716.87
kidney, neonate N00.CNhs11214.646-21G722.30
kidney, neonate N10.CNhs11206.758-6D525.61
kidney, neonate N20.CNhs11113.832-19I127.60
kidney, neonate N25.CNhs11122.1353-25F322.29
kidney, neonate N30.CNhs11203.1385-42H118.88
liver, adult pregnant day01.CNhs10466.508-5B224.90
liver, embryo E12.CNhs10601.355-15F810.01
liver, embryo E13.CNhs10524.378-3H66.29
liver, embryo E14.CNhs10594.409-16E17.42
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F58.44
liver, embryo E17.CNhs10510.481-18A38.15
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F416.21
liver, neonate N03.CNhs11123.1345-25G210.98
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H228.28
liver, neonate N10.CNhs11115.751-24B929.33
liver, neonate N20.CNhs11220.823-25A337.38
liver, neonate N25.CNhs11198.1368-26H126.73
liver, neonate N30.CNhs11106.1382-42D115.44
lung, adult.CNhs10474.28-22B116.07
lung, embryo E12.CNhs10522.354-16G216.68
lung, embryo E14.CNhs10604.404-26F818.25
lung, embryo E15.CNhs11020.432-17C518.16
lung, embryo E16.CNhs10998.458-17B623.94
lung, embryo E17.CNhs10605.480-44A633.00
lung, embryo E18.CNhs10583.1287-20I637.85
lung, neonate N00.CNhs11224.640-42C639.22
lung, neonate N06.CNhs11212.683-20E520.49
lung, neonate N07.CNhs11111.715-19A318.82
lung, neonate N10.CNhs11219.750-23E625.83
lung, neonate N20.CNhs11109.822-18A424.09
lung, neonate N25.CNhs11119.1359-25C720.03
lung, neonate N30.CNhs11133.1394-42H229.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H211.87
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A38.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.15
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I717.74
ovary, embryo E18.CNhs11040.505-44H715.85
ovary, neonate N00.CNhs11217.1299-22I421.01
oviduct, adult pregnant day01.CNhs10500.988-6G627.55
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F415.05
pancreas, embryo E15.CNhs11042.1556-45F211.49
pancreas, embryo E16.CNhs11003.460-26E517.92
pancreas, embryo E17.CNhs10599.1558-45G315.36
pancreas, embryo E18.CNhs10580.1535-43I715.68
pancreas, neonate N00.CNhs11105.645-26G918.35
pancreas, neonate N01.CNhs11138.1531-43D717.45
pancreas, neonate N02.CNhs11139.1539-43D813.90
pancreas, neonate N16.CNhs11136.787-43B617.38
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H517.53
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E612.42
pituitary gland, embryo E13.CNhs11009.370-44C712.03
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B917.02
pituitary gland, embryo E16.CNhs11036.449-43F615.16
pituitary gland, embryo E17.CNhs11039.1265-44F513.33
pituitary gland, neonate N00.CNhs11190.1308-22E914.61
placenta, adult pregnant day10.CNhs10472.539-13I718.77
placenta, adult pregnant day17.CNhs10464.577-18G319.28
prostate, adult.CNhs10470.859-1F816.54
skin, adult.CNhs10492.30-1C39.40
skin, neonate N00.CNhs11124.650-25G412.59
skin, neonate N03.CNhs11215.662-22H38.14
skin, neonate N06.CNhs11097.693-20I59.67
skin, neonate N10.CNhs11108.762-6C412.31
small intestine, neonate N16.CNhs11114.790-21I114.57
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C112.80
spleen, embryo E18.CNhs11011.1271-21F212.59
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E310.60
stomach, embryo E15.CNhs10603.1252-16G818.50
stomach, embryo E16.CNhs11022.459-17D410.58
stomach, embryo E17.CNhs11006.1035-18D512.34
stomach, embryo E18.CNhs10999.1286-20C614.19
stomach, neonate N03.CNhs11193.1340-24B810.92
stomach, neonate N07.CNhs11210.718-18A914.46
stomach, neonate N25.CNhs11104.1355-25E415.71
stomach, neonate N30.CNhs11134.1386-42I110.63
submandibular gland, adult.CNhs10469.59-29C127.96
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F519.14
testis, embryo E15.CNhs11034.443-27C510.26
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I57.62
testis, embryo E18.CNhs11027.503-18G59.29
testis, neonate N00.CNhs11189.1300-22B711.97
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D97.65
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I49.12
thymus, embryo E15.CNhs11005.430-45I26.47
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G72.79
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.28
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.72
urinary bladder, adult.CNhs10481.879-12E48.69
uterus, adult pregnant day19.CNhs10497.590-15F521.02
uterus, adult.CNhs10509.92-27E517.58
vagina, adult.CNhs10502.89-27D56.86
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I84.98
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H27.85
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.41
whole body, embryo E17.5.CNhs10513.490-9F913.70
whole body, embryo E17.CNhs10517.475-3I57.74
whole body, embryo E18.CNhs10516.493-3B311.70
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C610.33
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B45.33





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element1.08e-1579
trunk7.32e-1290
subdivision of trunk1.16e-1166
epithelial bud4.68e-0917
lung9.50e-0914
respiratory tube9.50e-0914
respiration organ9.50e-0914
pair of lungs9.50e-0914
lung primordium9.50e-0914
lung bud9.50e-0914
epithelial fold2.49e-0720
thoracic cavity element7.71e-0717
thoracic segment organ7.71e-0717
thoracic cavity7.71e-0717
thoracic segment of trunk7.71e-0717
respiratory primordium7.71e-0717
endoderm of foregut7.71e-0717
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