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FFCP PHASE1:Mm9::chrX:149078974..149079013,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=110380
|EntrezGene=110380
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=A2ALU4
|UniProt=A2ALU4
|association_with_transcript=7bp_to_uc009uqj.1,uc009uqk.1_5end
|association_with_transcript=7bp_to_uc009uqj.1,uc009uqk.1_5end
|cluster_id=chrX:149078974..149079013,-
|description=CAGE_peak_2_at_Shroom2_5end
|description=CAGE_peak_2_at_Shroom2_5end
|id=chrX:149078974..149079013,-
|id=chrX:149078974..149079013,-
|ontology_enrichment_celltype=CL:0000540!3.80e-17!33;CL:0000047!3.80e-17!33;CL:0000031!3.80e-17!33;CL:0000404!3.80e-17!33;CL:0000117!4.08e-15!23;CL:0000337!4.08e-15!23;CL:0000393!1.16e-14!39;CL:0000211!1.16e-14!39;CL:0000221!4.74e-13!44;CL:0000133!4.74e-13!44;CL:0002319!7.62e-13!43;CL:0000055!7.28e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.84e-19,33;CL:0000047,1.84e-19,33;CL:0000031,1.84e-19,33;CL:0000404,1.84e-19,33;CL:0000117,5.03e-19,23;CL:0000337,5.03e-19,23;CL:0000393,7.75e-15,39;CL:0000211,7.75e-15,39;CL:0002319,1.63e-12,43;CL:0000221,5.27e-12,44;CL:0000133,5.27e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.89e-30!75;UBERON:0001016!1.89e-30!75;UBERON:0001017!3.88e-30!73;UBERON:0005743!3.88e-30!73;UBERON:0004121!2.89e-29!102;UBERON:0000924!2.89e-29!102;UBERON:0006601!2.89e-29!102;UBERON:0002346!4.95e-26!71;UBERON:0003075!4.95e-26!71;UBERON:0007284!4.95e-26!71;UBERON:0000033!6.81e-25!63;UBERON:0001049!5.31e-24!52;UBERON:0005068!5.31e-24!52;UBERON:0006241!5.31e-24!52;UBERON:0007135!5.31e-24!52;UBERON:0000955!3.27e-22!50;UBERON:0006238!3.27e-22!50;UBERON:0003056!6.32e-22!49;UBERON:0002020!2.00e-21!34;UBERON:0002616!2.14e-21!49;UBERON:0003080!4.57e-19!40;UBERON:0002780!2.63e-18!39;UBERON:0001890!2.63e-18!39;UBERON:0006240!2.63e-18!39;UBERON:0002791!2.29e-17!29;UBERON:0003528!2.29e-17!29;UBERON:0001893!2.29e-17!29;UBERON:0007811!6.70e-14!86;UBERON:0000956!2.52e-12!21;UBERON:0001869!2.52e-12!21;UBERON:0000203!2.52e-12!21;UBERON:0002619!6.32e-11!17;UBERON:0000153!7.46e-11!94;UBERON:0002021!1.50e-09!10;UBERON:0000411!1.50e-09!10;UBERON:0001950!1.50e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.05e-31,73;UBERON:0001016,9.56e-30,75;UBERON:0002346,1.31e-27,64;UBERON:0003075,1.31e-27,64;UBERON:0007284,1.31e-27,64;UBERON:0000073,2.14e-27,54;UBERON:0002020,2.19e-26,34;UBERON:0004121,4.63e-26,95;UBERON:0000924,4.63e-26,95;UBERON:0006601,4.63e-26,95;UBERON:0001049,1.50e-25,52;UBERON:0005068,1.50e-25,52;UBERON:0006241,1.50e-25,52;UBERON:0007135,1.50e-25,52;UBERON:0010371,5.44e-22,73;UBERON:0003528,3.53e-21,29;UBERON:0002791,3.53e-21,29;UBERON:0001893,3.53e-21,29;UBERON:0003056,9.57e-21,49;UBERON:0000955,1.03e-20,47;UBERON:0006238,1.03e-20,47;UBERON:0002616,9.40e-20,46;UBERON:0003080,6.99e-19,40;UBERON:0002780,5.72e-18,39;UBERON:0001890,5.72e-18,39;UBERON:0006240,5.72e-18,39;UBERON:0000956,1.04e-14,21;UBERON:0001869,1.04e-14,21;UBERON:0000203,1.04e-14,21;UBERON:0010314,6.21e-14,92;UBERON:0002619,6.94e-13,17;UBERON:0002021,7.48e-12,10;UBERON:0000411,7.48e-12,10;UBERON:0001950,7.48e-12,10;UBERON:0002420,1.17e-07,8;UBERON:0007245,1.17e-07,8;UBERON:0010009,1.17e-07,8;UBERON:0010011,1.17e-07,8;UBERON:0000454,1.17e-07,8;UBERON:0002240,2.43e-07,6;UBERON:0005174,2.43e-07,6;UBERON:0001137,2.43e-07,6;UBERON:0003076,3.22e-07,12;UBERON:0003057,3.22e-07,12
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,23.4687094597133,41.7902873624906,27.8885817542719,0.677689064138264,0,0,0,0,0,0.768436610643109,1.97010263386108,2.43010688997043,3.36519938162211,38.5628828945135,41.0815486170001,11.2691535277758,7.09256485534949,6.43453150627015,46.2486700197433,26.3035916455487,24.1162257212302,21.4974649000216,19.5783557309157,17.7110545989298,21.7762739221077,17.4456409109821,16.1966142643419,86.6208041292583,89.1246721802384,42.4990736481685,0.302904773332736,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.985903938436763,0,0,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0.608930956624282,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,2.09446706813455,0,0,0,0,42.8401228697793,36.6000482254901,16.8376831831238,45.889620530761,46.2844977767898,23.8956251243494,25.1473957755024,0,0,0,1.26265113531884,0.520481771850815,0.459804208866946,2.52086981727489,1.80845781402858,4.08218994907967,5.89323113310309,5.62210347358373,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,29.6508827475419,15.3327872445134,0,0,0,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,35.3211297973142,32.5848488726325,0,0,0.631016438832513,1.17131623288992,2.15423397732799,4.30143836314594,3.7875774594007,2.54768877709949,1.61924280669958,2.92255857911312,1.58115111178609,52.3753745767545,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.388076051348264,0.428674070063185,0,0.535106452806212,1.31639216481697,1.2178597964584,0,0,0,0,0,0.180938774784468,0.238744688006273,0.328281799490123,0,37.0850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,64.9464619009626,69.0487854760765,73.3306257202428,45.7129465034209,65.7679218979817,65.7192690729039,54.0018000185445,49.5353323546642,62.080510030836,57.471394604452,1.14166082342594,2.79317411380722,3.07320490357441,5.10524105843418,8.17491334249131,7.16989682955055,6.22290837844523,5.97501665992793,6.73930340142812,5.30664144703975,6.59046179714623,6.41329560712659,4.02658482120494,4.60981097315059,5.85841783347255,5.23923060411381,4.40360438590451,3.6652751888104,3.29668720642645,4.26876868389752,4.4573002810104,5.14679837862079,5.48403236878838,3.63366041580821,4.89368778159719,4.56918882615053,5.48783918618318,6.05060336307039,4.88894809845102,3.92799590160417,5.57584585183618,3.25064791839359,4.09231043169689,3.56354734727722,5.78719832943424,11.7410971630835,5.38042699424439,5.58664740525576,3.25190164517034,2.8676884485537,2.08681052058379
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,23.4687094597133,41.7902873624906,27.8885817542719,0.677689064138264,0,0,0,0,0,0.768436610643109,1.97010263386108,2.43010688997043,3.36519938162211,38.5628828945135,41.0815486170001,11.2691535277758,7.09256485534949,6.43453150627015,46.2486700197433,26.3035916455487,24.1162257212302,21.4974649000216,19.5783557309157,17.7110545989298,21.7762739221077,17.4456409109821,16.1966142643419,86.6208041292583,89.1246721802384,42.4990736481685,0.302904773332736,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.985903938436763,0,0,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0.608930956624282,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,2.09446706813455,0,0,0,0,42.8401228697793,36.6000482254901,16.8376831831238,45.889620530761,46.2844977767898,23.8956251243494,25.1473957755024,0,0,0,1.26265113531884,0.520481771850815,0.459804208866946,2.52086981727489,1.80845781402858,4.08218994907967,5.89323113310309,5.62210347358373,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,29.6508827475419,15.3327872445134,0,0,0,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,35.3211297973142,32.5848488726325,0,0,0.631016438832513,1.17131623288992,2.15423397732799,4.30143836314594,3.7875774594007,2.54768877709949,1.61924280669958,2.92255857911312,1.58115111178609,52.3753745767545,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.388076051348264,0.428674070063185,0,0.535106452806212,1.31639216481697,1.2178597964584,0,0,0,0,0,0.180938774784468,0.238744688006273,0.328281799490123,0,37.0850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,64.9464619009626,69.0487854760765,73.3306257202428,45.7129465034209,65.7679218979817,65.7192690729039,54.0018000185445,49.5353323546642,62.080510030836,57.471394604452,1.14166082342594,2.79317411380722,3.07320490357441,5.10524105843418,8.17491334249131,7.16989682955055,6.22290837844523,5.97501665992793,6.73930340142812,5.30664144703975,6.59046179714623,6.41329560712659,4.02658482120494,4.60981097315059,5.85841783347255,5.23923060411381,4.40360438590451,3.6652751888104,3.29668720642645,4.26876868389752,4.4573002810104,5.14679837862079,5.48403236878838,3.63366041580821,4.89368778159719,4.56918882615053,5.48783918618318,6.05060336307039,4.88894809845102,3.92799590160417,5.57584585183618,3.25064791839359,4.09231043169689,3.56354734727722,5.78719832943424,11.7410971630835,5.38042699424439,5.58664740525576,3.25190164517034,2.8676884485537,2.08681052058379
|short_description=p2@Shroom2
|short_description=p2@Shroom2
}}
}}

Latest revision as of 16:53, 1 October 2015

Short description:p2@Shroom2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Shroom2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 7bp_to_uc009uqj.1, uc009uqk.1_5end
EntrezGene:Shroom2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Shroom2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C323.47
Mouse Granule cells, donor2.CNhs12357.11731-123E341.79
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F138.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D541.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D346.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D686.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F689.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E142.50
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A442.84
corpus striatum, adult.CNhs10487.19-21D836.60
corpus striatum, neonate N00.CNhs11226.630-43F116.84
cortex, adult.CNhs10473.12-14D545.89
cortex, neonate N30.CNhs11107.1392-42F246.28
diencephalon, adult.CNhs10482.20-12F223.90
diencephalon, neonate N30.CNhs11201.1388-42B225.15
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C64.08
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G85.62
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E829.65
hippocampus, neonate N00.CNhs11228.627-43G115.33
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C235.32
medulla oblongata, neonate N30.CNhs11200.1396-42A332.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I952.38
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C937.09
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A164.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A269.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A373.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D745.71
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A465.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A565.72
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A654.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A749.54
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A862.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A957.47
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F27.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.84e-1933
neuronal stem cell1.84e-1933
neuroblast1.84e-1933
electrically signaling cell1.84e-1933
CNS neuron (sensu Vertebrata)5.03e-1923
neuroblast (sensu Vertebrata)5.03e-1923
electrically responsive cell7.75e-1539
electrically active cell7.75e-1539
neural cell1.63e-1243
ectodermal cell5.27e-1244
neurectodermal cell5.27e-1244

Uber anatomy
Ontology termp-valuen
central nervous system4.05e-3173
nervous system9.56e-3075
neurectoderm1.31e-2764
neural plate1.31e-2764
presumptive neural plate1.31e-2764
regional part of nervous system2.14e-2754
gray matter2.19e-2634
ectoderm-derived structure4.63e-2695
ectoderm4.63e-2695
presumptive ectoderm4.63e-2695
neural tube1.50e-2552
neural rod1.50e-2552
future spinal cord1.50e-2552
neural keel1.50e-2552
ecto-epithelium5.44e-2273
brain grey matter3.53e-2129
regional part of telencephalon3.53e-2129
telencephalon3.53e-2129
pre-chordal neural plate9.57e-2149
brain1.03e-2047
future brain1.03e-2047
regional part of brain9.40e-2046
anterior neural tube6.99e-1940
regional part of forebrain5.72e-1839
forebrain5.72e-1839
future forebrain5.72e-1839
cerebral cortex1.04e-1421
cerebral hemisphere1.04e-1421
pallium1.04e-1421
structure with developmental contribution from neural crest6.21e-1492
regional part of cerebral cortex6.94e-1317
occipital lobe7.48e-1210
visual cortex7.48e-1210
neocortex7.48e-1210
basal ganglion1.17e-078
nuclear complex of neuraxis1.17e-078
aggregate regional part of brain1.17e-078
collection of basal ganglia1.17e-078
cerebral subcortex1.17e-078
spinal cord2.43e-076
dorsal region element2.43e-076
dorsum2.43e-076
posterior neural tube3.22e-0712
chordal neural plate3.22e-0712
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