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FFCP PHASE1:Mm9::chr1:84692359..84692443,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:84692359..84692443,-
|DHSsupport=NA
|short_description=p1@Dner
|DPIdataset=NA
|description=CAGE_peak_1_at_Dner_5end
|association_with_transcript=352bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end
|EntrezGene=227325
|EntrezGene=227325
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q8JZM4
|UniProt=Q8JZM4
|association_with_transcript=352bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end
|cluster_id=chr1:84692359..84692443,-
|description=CAGE_peak_1_at_Dner_5end
|id=chr1:84692359..84692443,-
|ontology_enrichment_celltype=CL:0000221!8.89e-20!44;CL:0000133!8.89e-20!44;CL:0002319!9.52e-20!43;CL:0000540!4.08e-16!33;CL:0000047!4.08e-16!33;CL:0000031!4.08e-16!33;CL:0000404!4.08e-16!33;CL:0000055!2.89e-15!50;CL:0000117!4.85e-15!23;CL:0000337!4.85e-15!23;CL:0000393!1.51e-12!39;CL:0000211!1.51e-12!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.65e-21,44;CL:0000133,1.65e-21,44;CL:0002319,1.77e-21,43;CL:0000540,1.69e-17,33;CL:0000047,1.69e-17,33;CL:0000031,1.69e-17,33;CL:0000404,1.69e-17,33;CL:0000117,2.55e-16,23;CL:0000337,2.55e-16,23;CL:0000393,8.10e-14,39;CL:0000211,8.10e-14,39;CL:0002321,5.91e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.51e-38!75;UBERON:0001016!8.51e-38!75;UBERON:0001017!8.60e-38!73;UBERON:0005743!8.60e-38!73;UBERON:0004121!3.95e-33!102;UBERON:0000924!3.95e-33!102;UBERON:0006601!3.95e-33!102;UBERON:0002346!1.85e-30!71;UBERON:0003075!1.85e-30!71;UBERON:0007284!1.85e-30!71;UBERON:0001049!3.96e-28!52;UBERON:0005068!3.96e-28!52;UBERON:0006241!3.96e-28!52;UBERON:0007135!3.96e-28!52;UBERON:0000033!6.24e-27!63;UBERON:0000955!1.90e-26!50;UBERON:0006238!1.90e-26!50;UBERON:0002616!9.79e-26!49;UBERON:0003056!6.49e-22!49;UBERON:0003080!4.41e-20!40;UBERON:0002780!1.83e-19!39;UBERON:0001890!1.83e-19!39;UBERON:0006240!1.83e-19!39;UBERON:0002020!2.29e-19!34;UBERON:0002791!8.98e-16!29;UBERON:0003528!8.98e-16!29;UBERON:0001893!8.98e-16!29;UBERON:0007811!6.02e-12!86;UBERON:0000956!4.51e-11!21;UBERON:0001869!4.51e-11!21;UBERON:0000203!4.51e-11!21;UBERON:0000153!7.71e-11!94;UBERON:0002619!2.73e-09!17;UBERON:0003076!1.61e-08!12;UBERON:0003057!1.61e-08!12;UBERON:0000468!6.84e-08!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.93e-41,75;UBERON:0001017,2.97e-41,73;UBERON:0004121,1.21e-34,95;UBERON:0000924,1.21e-34,95;UBERON:0006601,1.21e-34,95;UBERON:0002346,1.10e-33,64;UBERON:0003075,1.10e-33,64;UBERON:0007284,1.10e-33,64;UBERON:0000073,2.51e-32,54;UBERON:0001049,1.16e-30,52;UBERON:0005068,1.16e-30,52;UBERON:0006241,1.16e-30,52;UBERON:0007135,1.16e-30,52;UBERON:0010371,3.59e-27,73;UBERON:0000955,1.44e-26,47;UBERON:0006238,1.44e-26,47;UBERON:0002616,8.44e-26,46;UBERON:0003056,7.49e-24,49;UBERON:0003080,7.64e-22,40;UBERON:0002780,3.64e-21,39;UBERON:0001890,3.64e-21,39;UBERON:0006240,3.64e-21,39;UBERON:0002020,4.64e-21,34;UBERON:0010314,1.65e-20,92;UBERON:0003528,4.01e-17,29;UBERON:0002791,4.01e-17,29;UBERON:0001893,4.01e-17,29;UBERON:0000956,5.64e-12,21;UBERON:0001869,5.64e-12,21;UBERON:0000203,5.64e-12,21;UBERON:0002619,5.04e-10,17;UBERON:0003076,3.51e-09,12;UBERON:0003057,3.51e-09,12
|phase1_expression=11.8510146857548,0,0,0,0.500895729946347,1.6787927191189,1.40167584357315,0,0,0.234064526321993,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,21.0056926673142,0,0,0,0.22940928106717,0,0,0,0.950117097281869,0.756090389279792,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.304130793658544,0,43.0315239391422,44.0410815888502,42.838805633222,29.3589147602168,31.4969448657066,89.1265899062824,0.167782606057736,0,0,1.02903774414379,1.71920063963254,1.54701627683233,141.216889679999,163.98720357433,215.502677192101,10.8430250262122,8.00365316500025,0,0.988866362566974,0.7104801149461,57.5232212195337,122.949857702897,43.5496371695606,60.0776425576023,46.4818164586554,157.393692406496,165.872274254662,86.2335226473276,55.2069913065042,152.590318577263,148.656439349175,117.600038376458,120.120309006382,155.625819521629,108.321370025253,120.851901969168,129.540911536641,142.378940338015,134.768054539147,238.649154233671,187.788246974017,202.988996503752,3.63485727999283,4.38315048619356,0,0,0,1.07940638327563,0,0,6.31999890592883,0,0,0,6.19711047017394,0,0,0,0,0,0,2.96878087269556,0,3.85949561568544,1.90833859442749,3.34912026143355,2.53677046981664,4.97384713823654,6.93773372100658,1.13099932196708,0.494389935468748,1.44599356919912,0,0.647067399789637,1.32504911076236,0,0,224.562871307857,217.405681672366,2.04365644166873,0,0,0,114.589839144689,64.0500843946077,76.3978460846216,108.814024440365,82.8518081750271,125.296190869415,95.5601039469093,1.83310854930569,1.36847667671102,2.52722758433675,7.78634866779954,1.95180664444056,12.644615743841,18.9065236295617,14.7690721479001,21.2954242343656,20.2419678050063,21.4576949241779,27.4225572983357,1.07783996466421,1.51284864134255,2.28736461413134,5.2606975782618,1.39023624612799,1.39300866608867,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.656669856316381,0.56748166682099,0.146199987425332,0.439100230582101,0,74.2323518431369,89.8357266071153,0,0,0.639864751605702,0.696710015581316,1.9330119198314,2.21851877085677,1.55664630691409,1.14135375667535,2.84717436926707,1.4822905925161,1.00534083520108,2.38747766449381,3.70431765526328,2.69645822596266,1.29682829924817,1.1948476395262,1.32767530667157,1.37098215131675,1.1270773567308,0.814605311381257,0.387904974335251,0.631222379012867,0.569128834118316,0,0,0,0,0.166845105716094,0.589676985339609,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.739012760666419,0.568474235311454,0.488894929326078,1.01847051465113,0.234690248288502,0.670025029767263,0.238043640886014,1.36593553500459,0.315270288212382,1.7717175171902,0.478364305972461,0.81931657357869,1.72684981865896,0.289298117163023,1.50791283939272,3.80733978673097,0,0,99.7019163824188,92.0111739748795,0,0,9.4652465824877,17.1793047490521,21.7577631710127,4.54040716109849,9.80314165962534,15.286132662597,8.50102473517278,21.0424217696145,18.1832377855401,141.060057909173,1.56134093729095,0.178065603667255,1.30309567482861,0.494910368917606,0,1.45668381692989,1.81394134178851,0.377210159511796,0.885905678642318,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,1.8962205476149,0,1.03135543248187,119.834741225333,5.40183282093931,8.66703181344455,17.7899739076222,33.8719846256743,39.0627710548535,38.5044708208963,63.9376393140658,0.23467170806371,0,7.71849393192367,0,0.484393280087717,0.361877549568935,0.358117032009409,0.656563598980245,1.7488850197791,86.593616038908,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0,0,0,0,0,2.86401185404534,0.316335993581135,3.04979200690273,2.05210147561422,1.67270636811575,2.18362563746178,3.77620169877498,2.47960367176008,2.35580347785627,1.68499465279331,0,0.56369293868419,0.149516546043979,0.330916980914195,1.75006069509643,2.19571699912143,2.02747350588934,2.11243029562357,5.9894017028217,5.66240459898839,1.20792060413003,2.88030006257865,0,1.01362607645082,0.513554785824136,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0,0,0.680191150845634,0.221985953374065,0.62799699626633,0.167884616364078,18.1598218390259,0.375364950902364,0.36630324853453,0.643105137237198,2.00628841614145,101.090579828455,86.0808192268421,87.6530135562277,86.7858570835622,55.491684101422,67.2300568676833,64.1271375220216,67.9985016868573,56.1896587140414,64.2022786572257,2.38710899443606,24.3405172774629,25.9515080746284,17.5036836289172,14.6729213839588,14.5236371675511,20.0022055021454,21.427645952845,23.7480215097943,24.2589323293246,19.5179060915485,20.1830185283102,16.4809053146993,20.3599984647484,18.8388338174412,18.0991602687568,18.3097234992872,15.6256468575601,19.3680373377554,20.1662520584124,14.4005086001874,13.665637074269,10.9680647375768,18.4589949123057,18.8218760830661,17.8536822651437,16.8293735042951,15.5211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|phase1_expression=11.8510146857548,0,0,0,0.500895729946347,1.6787927191189,1.40167584357315,0,0,0.234064526321993,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,21.0056926673142,0,0,0,0.22940928106717,0,0,0,0.950117097281869,0.756090389279792,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.304130793658544,0,43.0315239391422,44.0410815888502,42.838805633222,29.3589147602168,31.4969448657066,89.1265899062824,0.167782606057736,0,0,1.02903774414379,1.71920063963254,1.54701627683233,141.216889679999,163.98720357433,215.502677192101,10.8430250262122,8.00365316500025,0,0.988866362566974,0.7104801149461,57.5232212195337,122.949857702897,43.5496371695606,60.0776425576023,46.4818164586554,157.393692406496,165.872274254662,86.2335226473276,55.2069913065042,152.590318577263,148.656439349175,117.600038376458,120.120309006382,155.625819521629,108.321370025253,120.851901969168,129.540911536641,142.378940338015,134.768054539147,238.649154233671,187.788246974017,202.988996503752,3.63485727999283,4.38315048619356,0,0,0,1.07940638327563,0,0,6.31999890592883,0,0,0,6.19711047017394,0,0,0,0,0,0,2.96878087269556,0,3.85949561568544,1.90833859442749,3.34912026143355,2.53677046981664,4.97384713823654,6.93773372100658,1.13099932196708,0.494389935468748,1.44599356919912,0,0.647067399789637,1.32504911076236,0,0,224.562871307857,217.405681672366,2.04365644166873,0,0,0,114.589839144689,64.0500843946077,76.3978460846216,108.814024440365,82.8518081750271,125.296190869415,95.5601039469093,1.83310854930569,1.36847667671102,2.52722758433675,7.78634866779954,1.95180664444056,12.644615743841,18.9065236295617,14.7690721479001,21.2954242343656,20.2419678050063,21.4576949241779,27.4225572983357,1.07783996466421,1.51284864134255,2.28736461413134,5.2606975782618,1.39023624612799,1.39300866608867,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.656669856316381,0.56748166682099,0.146199987425332,0.439100230582101,0,74.2323518431369,89.8357266071153,0,0,0.639864751605702,0.696710015581316,1.9330119198314,2.21851877085677,1.55664630691409,1.14135375667535,2.84717436926707,1.4822905925161,1.00534083520108,2.38747766449381,3.70431765526328,2.69645822596266,1.29682829924817,1.1948476395262,1.32767530667157,1.37098215131675,1.1270773567308,0.814605311381257,0.387904974335251,0.631222379012867,0.569128834118316,0,0,0,0,0.166845105716094,0.589676985339609,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.739012760666419,0.568474235311454,0.488894929326078,1.01847051465113,0.234690248288502,0.670025029767263,0.238043640886014,1.36593553500459,0.315270288212382,1.7717175171902,0.478364305972461,0.81931657357869,1.72684981865896,0.289298117163023,1.50791283939272,3.80733978673097,0,0,99.7019163824188,92.0111739748795,0,0,9.4652465824877,17.1793047490521,21.7577631710127,4.54040716109849,9.80314165962534,15.286132662597,8.50102473517278,21.0424217696145,18.1832377855401,141.060057909173,1.56134093729095,0.178065603667255,1.30309567482861,0.494910368917606,0,1.45668381692989,1.81394134178851,0.377210159511796,0.885905678642318,0.614870295887855,1.03371317267288,0.727067458955011,0.712994756769443,1.8962205476149,0,1.03135543248187,119.834741225333,5.40183282093931,8.66703181344455,17.7899739076222,33.8719846256743,39.0627710548535,38.5044708208963,63.9376393140658,0.23467170806371,0,7.71849393192367,0,0.484393280087717,0.361877549568935,0.358117032009409,0.656563598980245,1.7488850197791,86.593616038908,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0,0,0,0,0,2.86401185404534,0.316335993581135,3.04979200690273,2.05210147561422,1.67270636811575,2.18362563746178,3.77620169877498,2.47960367176008,2.35580347785627,1.68499465279331,0,0.56369293868419,0.149516546043979,0.330916980914195,1.75006069509643,2.19571699912143,2.02747350588934,2.11243029562357,5.9894017028217,5.66240459898839,1.20792060413003,2.88030006257865,0,1.01362607645082,0.513554785824136,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0,0,0.680191150845634,0.221985953374065,0.62799699626633,0.167884616364078,18.1598218390259,0.375364950902364,0.36630324853453,0.643105137237198,2.00628841614145,101.090579828455,86.0808192268421,87.6530135562277,86.7858570835622,55.491684101422,67.2300568676833,64.1271375220216,67.9985016868573,56.1896587140414,64.2022786572257,2.38710899443606,24.3405172774629,25.9515080746284,17.5036836289172,14.6729213839588,14.5236371675511,20.0022055021454,21.427645952845,23.7480215097943,24.2589323293246,19.5179060915485,20.1830185283102,16.4809053146993,20.3599984647484,18.8388338174412,18.0991602687568,18.3097234992872,15.6256468575601,19.3680373377554,20.1662520584124,14.4005086001874,13.665637074269,10.9680647375768,18.4589949123057,18.8218760830661,17.8536822651437,16.8293735042951,15.5211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|short_description=p1@Dner
}}
}}

Latest revision as of 16:49, 1 October 2015

Short description:p1@Dner
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dner_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 352bp_to_ENSMUST00000049126, NM_152915, uc007bsw.1, uc007bsx.1_5end
EntrezGene:Dner
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dner

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B743.03
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C244.04
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B842.84
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C329.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C431.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C489.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C3141.22
Mouse Granule cells, donor2.CNhs12357.11731-123E3163.99
Mouse Granule cells, donor3.CNhs12108.11636-122C7215.50
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C857.52
Mouse Microglia, donor2.CNhs12634.11736-123E8122.95
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D543.55
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F560.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D946.48
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1157.39
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5165.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D286.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F255.21
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6152.59
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3148.66
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3117.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7120.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4155.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4108.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8120.85
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4129.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5142.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6134.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6238.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6187.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1202.99
Mouse Schwann, donor1.CNhs12507.11728-123D93.63
Mouse Schwann, donor2.CNhs12573.11746-123F94.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C16.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2224.56
cerebellum, neonate N30.CNhs11135.1395-42I2217.41
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4114.59
corpus striatum, adult.CNhs10487.19-21D864.05
corpus striatum, neonate N00.CNhs11226.630-43F176.40
cortex, adult.CNhs10473.12-14D5108.81
cortex, neonate N30.CNhs11107.1392-42F282.85
diencephalon, adult.CNhs10482.20-12F2125.30
diencephalon, neonate N30.CNhs11201.1388-42B295.56
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C918.91
eyeball, embryo E17.CNhs11023.1261-18D414.77
eyeball, neonate N00.CNhs11207.633-15C621.30
eyeball, neonate N01.CNhs11140.1532-43E720.24
eyeball, neonate N02.CNhs11205.1551-44G821.46
eyeball, neonate N16.CNhs11188.777-19A227.42
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E874.23
hippocampus, neonate N00.CNhs11228.627-43G189.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C299.70
medulla oblongata, neonate N30.CNhs11200.1396-42A392.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.18
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.18
olfactory brain, adult.CNhs10489.18-22I9141.06
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G8119.83
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C78.67
pituitary gland, embryo E14.CNhs11037.398-44A517.79
pituitary gland, embryo E15.CNhs10592.427-16B933.87
pituitary gland, embryo E16.CNhs11036.449-43F639.06
pituitary gland, embryo E17.CNhs11039.1265-44F538.50
pituitary gland, neonate N00.CNhs11190.1308-22E963.94
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C986.59
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I45.99
testis, neonate N10.CNhs11204.763-44D95.66
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E418.16
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1101.09
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A286.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A387.65
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D786.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A455.49
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.23
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A664.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A768.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A856.19
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A964.20
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C924.34
whole body, embryo E13.CNhs10512.372-23H225.95
whole body, embryo E14.5.CNhs10578.420-27D217.50
whole body, embryo E14.CNhs10519.395-14B114.67
whole body, embryo E16.CNhs10514.453-14F214.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.36
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.17
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.82
whole body, embryo E17.5.CNhs10513.490-9F916.20
whole body, embryo E17.CNhs10517.475-3I556.46
whole body, embryo E18.CNhs10516.493-3B322.22
whole body, neonate N00.CNhs10525.657-19C216.76
whole body, neonate N01.CNhs10576.659-23C68.61
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.65e-2144
neurectodermal cell1.65e-2144
neural cell1.77e-2143
neuron1.69e-1733
neuronal stem cell1.69e-1733
neuroblast1.69e-1733
electrically signaling cell1.69e-1733
CNS neuron (sensu Vertebrata)2.55e-1623
neuroblast (sensu Vertebrata)2.55e-1623
electrically responsive cell8.10e-1439
electrically active cell8.10e-1439
embryonic cell5.91e-0870

Uber anatomy
Ontology termp-valuen
nervous system2.93e-4175
central nervous system2.97e-4173
ectoderm-derived structure1.21e-3495
ectoderm1.21e-3495
presumptive ectoderm1.21e-3495
neurectoderm1.10e-3364
neural plate1.10e-3364
presumptive neural plate1.10e-3364
regional part of nervous system2.51e-3254
neural tube1.16e-3052
neural rod1.16e-3052
future spinal cord1.16e-3052
neural keel1.16e-3052
ecto-epithelium3.59e-2773
brain1.44e-2647
future brain1.44e-2647
regional part of brain8.44e-2646
pre-chordal neural plate7.49e-2449
anterior neural tube7.64e-2240
regional part of forebrain3.64e-2139
forebrain3.64e-2139
future forebrain3.64e-2139
gray matter4.64e-2134
structure with developmental contribution from neural crest1.65e-2092
brain grey matter4.01e-1729
regional part of telencephalon4.01e-1729
telencephalon4.01e-1729
cerebral cortex5.64e-1221
cerebral hemisphere5.64e-1221
pallium5.64e-1221
regional part of cerebral cortex5.04e-1017
posterior neural tube3.51e-0912
chordal neural plate3.51e-0912
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