FFCP PHASE1:Mm9::chr13:49243300..49243406,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75607 | |EntrezGene=75607 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=E0CZE3,E9QJQ9,E9QM73,E9QMI9,E9QMI8,Q3UH66 | |UniProt=E0CZE3,E9QJQ9,E9QM73,E9QMI9,E9QMI8,Q3UH66 | ||
|association_with_transcript=0bp_to_ENSMUST00000035538,ENSMUST00000049265,ENSMUST00000091623,ENSMUST00000110096,ENSMUST00000110097,ENSMUST00000162581,NM_029361,uc009val.1_5end | |association_with_transcript=0bp_to_ENSMUST00000035538,ENSMUST00000049265,ENSMUST00000091623,ENSMUST00000110096,ENSMUST00000110097,ENSMUST00000162581,NM_029361,uc009val.1_5end | ||
|cluster_id=chr13:49243300..49243406,- | |||
|description=CAGE_peak_1_at_Wnk2_5end | |description=CAGE_peak_1_at_Wnk2_5end | ||
|id=chr13:49243300..49243406,- | |id=chr13:49243300..49243406,- | ||
|ontology_enrichment_celltype=CL:0000117!6.06e-14!23;CL:0000337!6.06e-14!23;CL:0000540!5.45e-12!33;CL:0000047!5.45e-12!33;CL:0000031!5.45e-12!33;CL:0000404!5.45e-12!33;CL:0000221!1.76e-08!44;CL:0000133!1.76e-08!44;CL:0002319!2.61e-08!43;CL:0000393!2.42e-07!39;CL:0000211!2.42e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.21e-14,23;CL:0000337,4.21e-14,23;CL:0000540,4.01e-12,33;CL:0000047,4.01e-12,33;CL:0000031,4.01e-12,33;CL:0000404,4.01e-12,33;CL:0000221,2.34e-08,44;CL:0000133,2.34e-08,44;CL:0002319,3.48e-08,43;CL:0000393,1.45e-07,39;CL:0000211,1.45e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.52e-25!63;UBERON:0004121!3.93e-24!102;UBERON:0000924!3.93e-24!102;UBERON:0006601!3.93e-24!102;UBERON:0001017!1.06e-23!73;UBERON:0005743!1.06e-23!73;UBERON:0000073!4.04e-22!75;UBERON:0001016!4.04e-22!75;UBERON:0001049!1.71e-21!52;UBERON:0005068!1.71e-21!52;UBERON:0006241!1.71e-21!52;UBERON:0007135!1.71e-21!52;UBERON:0000955!1.29e-20!50;UBERON:0006238!1.29e-20!50;UBERON:0002616!5.03e-20!49;UBERON:0002346!5.80e-20!71;UBERON:0003075!5.80e-20!71;UBERON:0007284!5.80e-20!71;UBERON:0003056!2.58e-19!49;UBERON:0002020!2.47e-17!34;UBERON:0003080!4.41e-17!40;UBERON:0002780!1.58e-16!39;UBERON:0001890!1.58e-16!39;UBERON:0006240!1.58e-16!39;UBERON:0002791!8.29e-15!29;UBERON:0003528!8.29e-15!29;UBERON:0001893!8.29e-15!29;UBERON:0000956!1.58e-10!21;UBERON:0001869!1.58e-10!21;UBERON:0000203!1.58e-10!21;UBERON:0007811!4.18e-10!86;UBERON:0000468!6.53e-10!333;UBERON:0000153!8.48e-09!94;UBERON:0002619!5.79e-08!17;UBERON:0000922!5.63e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.55e-27,95;UBERON:0000924,3.55e-27,95;UBERON:0006601,3.55e-27,95;UBERON:0010371,1.73e-24,73;UBERON:0001017,5.53e-24,73;UBERON:0002346,7.11e-24,64;UBERON:0003075,7.11e-24,64;UBERON:0007284,7.11e-24,64;UBERON:0000073,5.30e-23,54;UBERON:0001016,4.31e-22,75;UBERON:0001049,9.48e-22,52;UBERON:0005068,9.48e-22,52;UBERON:0006241,9.48e-22,52;UBERON:0007135,9.48e-22,52;UBERON:0003056,1.53e-19,49;UBERON:0000955,3.88e-19,47;UBERON:0006238,3.88e-19,47;UBERON:0010314,1.50e-18,92;UBERON:0002616,1.50e-18,46;UBERON:0002020,1.55e-17,34;UBERON:0003080,2.79e-17,40;UBERON:0002780,1.02e-16,39;UBERON:0001890,1.02e-16,39;UBERON:0006240,1.02e-16,39;UBERON:0003528,5.61e-15,29;UBERON:0002791,5.61e-15,29;UBERON:0001893,5.61e-15,29;UBERON:0000956,1.21e-10,21;UBERON:0001869,1.21e-10,21;UBERON:0000203,1.21e-10,21;UBERON:0002619,4.80e-08,17 | |||
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| ||
|short_description=p1@Wnk2 | |short_description=p1@Wnk2 | ||
}} | }} |
Latest revision as of 16:42, 1 October 2015
Short description: | p1@Wnk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wnk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000035538, ENSMUST00000049265, ENSMUST00000091623, ENSMUST00000110096, ENSMUST00000110097, ENSMUST00000162581, NM_029361, uc009val.1_5end |
EntrezGene: | Wnk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.21e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.21e-14 | 23 |
neuron | 4.01e-12 | 33 |
neuronal stem cell | 4.01e-12 | 33 |
neuroblast | 4.01e-12 | 33 |
electrically signaling cell | 4.01e-12 | 33 |
ectodermal cell | 2.34e-08 | 44 |
neurectodermal cell | 2.34e-08 | 44 |
neural cell | 3.48e-08 | 43 |
electrically responsive cell | 1.45e-07 | 39 |
electrically active cell | 1.45e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.55e-27 | 95 |
ectoderm | 3.55e-27 | 95 |
presumptive ectoderm | 3.55e-27 | 95 |
ecto-epithelium | 1.73e-24 | 73 |
central nervous system | 5.53e-24 | 73 |
neurectoderm | 7.11e-24 | 64 |
neural plate | 7.11e-24 | 64 |
presumptive neural plate | 7.11e-24 | 64 |
regional part of nervous system | 5.30e-23 | 54 |
nervous system | 4.31e-22 | 75 |
neural tube | 9.48e-22 | 52 |
neural rod | 9.48e-22 | 52 |
future spinal cord | 9.48e-22 | 52 |
neural keel | 9.48e-22 | 52 |
pre-chordal neural plate | 1.53e-19 | 49 |
brain | 3.88e-19 | 47 |
future brain | 3.88e-19 | 47 |
structure with developmental contribution from neural crest | 1.50e-18 | 92 |
regional part of brain | 1.50e-18 | 46 |
gray matter | 1.55e-17 | 34 |
anterior neural tube | 2.79e-17 | 40 |
regional part of forebrain | 1.02e-16 | 39 |
forebrain | 1.02e-16 | 39 |
future forebrain | 1.02e-16 | 39 |
brain grey matter | 5.61e-15 | 29 |
regional part of telencephalon | 5.61e-15 | 29 |
telencephalon | 5.61e-15 | 29 |
cerebral cortex | 1.21e-10 | 21 |
cerebral hemisphere | 1.21e-10 | 21 |
pallium | 1.21e-10 | 21 |
regional part of cerebral cortex | 4.80e-08 | 17 |