FFCP PHASE1:Mm9::chr3:137806316..137806360,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:137806316..137806360,- to FFCP PHASE1:Mm9::chr3:137806316..137806360,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17777 | |EntrezGene=17777 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O08601,Q3UWK4 | |UniProt=O08601,Q3UWK4 | ||
|association_with_transcript=0bp_to_ENSMUST00000098580,NM_001163457,uc008rmx.2_5end | |||
|cluster_id=chr3:137806316..137806360,- | |||
|description=CAGE_peak_4_at_Mttp_5end | |||
|id=chr3:137806316..137806360,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.68e-14!63;UBERON:0002346!1.37e-13!71;UBERON:0003075!1.37e-13!71;UBERON:0007284!1.37e-13!71;UBERON:0000955!8.97e-13!50;UBERON:0006238!8.97e-13!50;UBERON:0002616!3.49e-12!49;UBERON:0001049!6.67e-12!52;UBERON:0005068!6.67e-12!52;UBERON:0006241!6.67e-12!52;UBERON:0007135!6.67e-12!52;UBERON:0001017!9.54e-11!73;UBERON:0005743!9.54e-11!73;UBERON:0004121!1.08e-10!102;UBERON:0000924!1.08e-10!102;UBERON:0006601!1.08e-10!102;UBERON:0000073!4.67e-10!75;UBERON:0001016!4.67e-10!75;UBERON:0003056!9.13e-10!49;UBERON:0004111!3.24e-09!122;UBERON:0003080!1.60e-08!40;UBERON:0000475!1.72e-08!200;UBERON:0000025!2.30e-08!114;UBERON:0002780!5.11e-08!39;UBERON:0001890!5.11e-08!39;UBERON:0006240!5.11e-08!39;UBERON:0000480!7.34e-08!308;UBERON:0000467!7.34e-08!308;UBERON:0000923!2.38e-07!314;UBERON:0005291!2.38e-07!314;UBERON:0006598!2.38e-07!314;UBERON:0002532!2.38e-07!314;UBERON:0000062!4.20e-07!269;UBERON:0007811!5.49e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.48e-13,64;UBERON:0003075,2.48e-13,64;UBERON:0007284,2.48e-13,64;UBERON:0000073,8.16e-13,54;UBERON:0001049,4.35e-12,52;UBERON:0005068,4.35e-12,52;UBERON:0006241,4.35e-12,52;UBERON:0007135,4.35e-12,52;UBERON:0010371,8.52e-12,73;UBERON:0000955,1.18e-11,47;UBERON:0006238,1.18e-11,47;UBERON:0001017,2.73e-11,73;UBERON:0002616,4.50e-11,46;UBERON:0001016,1.50e-10,75;UBERON:0004121,2.09e-10,95;UBERON:0000924,2.09e-10,95;UBERON:0006601,2.09e-10,95;UBERON:0003056,6.42e-10,49;UBERON:0010314,2.39e-09,92;UBERON:0004111,2.74e-09,122;UBERON:0003080,1.16e-08,40;UBERON:0000025,2.46e-08,114;UBERON:0002780,3.79e-08,39;UBERON:0001890,3.79e-08,39;UBERON:0006240,3.79e-08,39 | |||
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| ||
|short_description=p4@Mttp | |||
}} | }} |
Latest revision as of 16:40, 1 October 2015
Short description: | p4@Mttp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mttp_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000098580, NM_001163457, uc008rmx.2_5end |
EntrezGene: | Mttp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.48e-13 | 64 |
neural plate | 2.48e-13 | 64 |
presumptive neural plate | 2.48e-13 | 64 |
regional part of nervous system | 8.16e-13 | 54 |
neural tube | 4.35e-12 | 52 |
neural rod | 4.35e-12 | 52 |
future spinal cord | 4.35e-12 | 52 |
neural keel | 4.35e-12 | 52 |
ecto-epithelium | 8.52e-12 | 73 |
brain | 1.18e-11 | 47 |
future brain | 1.18e-11 | 47 |
central nervous system | 2.73e-11 | 73 |
regional part of brain | 4.50e-11 | 46 |
nervous system | 1.50e-10 | 75 |
ectoderm-derived structure | 2.09e-10 | 95 |
ectoderm | 2.09e-10 | 95 |
presumptive ectoderm | 2.09e-10 | 95 |
pre-chordal neural plate | 6.42e-10 | 49 |
structure with developmental contribution from neural crest | 2.39e-09 | 92 |
anatomical conduit | 2.74e-09 | 122 |
anterior neural tube | 1.16e-08 | 40 |
tube | 2.46e-08 | 114 |
regional part of forebrain | 3.79e-08 | 39 |
forebrain | 3.79e-08 | 39 |
future forebrain | 3.79e-08 | 39 |