FFCP PHASE1:Mm9::chr8:125202553..125202569,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12398 | |EntrezGene=12398 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3Z3P7 | |UniProt=D3Z3P7 | ||
|association_with_transcript=24bp_to_ENSMUST00000134045_5end | |association_with_transcript=24bp_to_ENSMUST00000134045_5end | ||
|cluster_id=chr8:125202553..125202569,- | |||
|description=CAGE_peak_8_at_Cbfa2t3_5end | |description=CAGE_peak_8_at_Cbfa2t3_5end | ||
|id=chr8:125202553..125202569,- | |id=chr8:125202553..125202569,- | ||
|ontology_enrichment_celltype=CL:0000117!3.05e-09!23;CL:0000337!3.05e-09!23 | |ontology_enrichment_celltype=CL:0000117!3.05e-09!23;CL:0000337!3.05e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.91e-18,23;CL:0000337,5.91e-18,23;CL:0002609,7.90e-17,6;CL:0000540,1.35e-11,33;CL:0000047,1.35e-11,33;CL:0000031,1.35e-11,33;CL:0000404,1.35e-11,33;CL:0000393,2.34e-09,39;CL:0000211,2.34e-09,39;CL:0002608,2.46e-09,3;CL:0002613,6.14e-09,3;CL:0000120,9.33e-09,3;CL:0002319,3.24e-08,43;CL:0000221,5.79e-08,44;CL:0000133,5.79e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,3.34e-10,41;UBERON:0001004,6.95e-10,42;UBERON:0002048,9.06e-08,14;UBERON:0000117,9.06e-08,14;UBERON:0000171,9.06e-08,14;UBERON:0000170,9.06e-08,14;UBERON:0005597,9.06e-08,14;UBERON:0000118,9.06e-08,14 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0.340173160604279,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,5.66486090406874,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,1.65903379693564,3.37514845829227,2.3135745748652,0.571301968807607,0.220868540951614,2.69479758272899,2.30029130443767,3.67687514644008,0,0.383062014255563,0.307213066512487,2.2420668914133,1.9212405156506,2.08365348222704,0.279182999001381,0,0.15279824777681,0.294628585473668,0.427115042397309,3.35519002485541,0,0,1.15945795480671,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0,0,0,0.127070227073065,1.19832511523858,0,0.376963056338593,0.869121600961382,0.767146371990992,0.20778804455956,0.162241263067758,0,0.248813941220186,0,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0.621377317606506,1.40715635988658,0.540186184383045,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.405344047729279,0.438599962275997,0.439100230582101,1.61047702512446,0.210289948564127,0.411618449517138,0,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.494096864172033,0,0.397912944082302,0,0,0,0,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.280543279561274,0.379419222745544,0,0.31399745568275,0.370191491765402,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,1.34005005953453,0.238043640886014,0.585400943573396,1.41871629695572,1.32878813789265,1.2756381492599,1.14704320301017,1.55416483679306,0.723245292907558,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.35613120733451,0,0.164970122972535,0,0.971122544619926,0.604647113929502,0.565815239267694,0,0.614870295887855,0.775284879504663,0,0.712994756769443,0,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0.214337035031592,0,0.713475270408282,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.387479470433193,0.168956125490778,0.58678619322877,0.911430693907651,0.209718688851422,0,0,1.89606672376907,0.202725215290164,0.205421914329655,0.25984164595559,1.61124026100733,1.19208812868759,0.961563596159751,1.32920574457119,1.00966449948148,0.838274873204998,1.31074040677893,0.974578807397524,1.34696578296461,1.05189211963412,0.226730383615211,0.221985953374065,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0.31136204275253,1.19707462020309,0.853668028770671,0,0.419226325255965,0.919217542250071,0,0.206035057238894,0.320919209591815,0,0,0.565879024158229,0.936415074698824,0.192075457214608,0.402048282689293,0.952587382566147,0.463537303779422,0.578727661391115,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0.290692833264657,0.376437521661322,0,0,0.263069711437843,0.135804113845862,0,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0.454999239389536,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0.340173160604279,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,5.66486090406874,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,1.65903379693564,3.37514845829227,2.3135745748652,0.571301968807607,0.220868540951614,2.69479758272899,2.30029130443767,3.67687514644008,0,0.383062014255563,0.307213066512487,2.2420668914133,1.9212405156506,2.08365348222704,0.279182999001381,0,0.15279824777681,0.294628585473668,0.427115042397309,3.35519002485541,0,0,1.15945795480671,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0,0,0,0.127070227073065,1.19832511523858,0,0.376963056338593,0.869121600961382,0.767146371990992,0.20778804455956,0.162241263067758,0,0.248813941220186,0,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0.621377317606506,1.40715635988658,0.540186184383045,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.405344047729279,0.438599962275997,0.439100230582101,1.61047702512446,0.210289948564127,0.411618449517138,0,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.494096864172033,0,0.397912944082302,0,0,0,0,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.280543279561274,0.379419222745544,0,0.31399745568275,0.370191491765402,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,1.34005005953453,0.238043640886014,0.585400943573396,1.41871629695572,1.32878813789265,1.2756381492599,1.14704320301017,1.55416483679306,0.723245292907558,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.35613120733451,0,0.164970122972535,0,0.971122544619926,0.604647113929502,0.565815239267694,0,0.614870295887855,0.775284879504663,0,0.712994756769443,0,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0.214337035031592,0,0.713475270408282,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.387479470433193,0.168956125490778,0.58678619322877,0.911430693907651,0.209718688851422,0,0,1.89606672376907,0.202725215290164,0.205421914329655,0.25984164595559,1.61124026100733,1.19208812868759,0.961563596159751,1.32920574457119,1.00966449948148,0.838274873204998,1.31074040677893,0.974578807397524,1.34696578296461,1.05189211963412,0.226730383615211,0.221985953374065,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0.31136204275253,1.19707462020309,0.853668028770671,0,0.419226325255965,0.919217542250071,0,0.206035057238894,0.320919209591815,0,0,0.565879024158229,0.936415074698824,0.192075457214608,0.402048282689293,0.952587382566147,0.463537303779422,0.578727661391115,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0.290692833264657,0.376437521661322,0,0,0.263069711437843,0.135804113845862,0,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421 | ||
|short_description=p8@Cbfa2t3 | |short_description=p8@Cbfa2t3 | ||
}} | }} |
Latest revision as of 16:24, 1 October 2015
Short description: | p8@Cbfa2t3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Cbfa2t3_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENSMUST00000134045_5end |
EntrezGene: | Cbfa2t3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.91e-18 | 23 |
neuroblast (sensu Vertebrata) | 5.91e-18 | 23 |
neuron of cerebral cortex | 7.90e-17 | 6 |
neuron | 1.35e-11 | 33 |
neuronal stem cell | 1.35e-11 | 33 |
neuroblast | 1.35e-11 | 33 |
electrically signaling cell | 1.35e-11 | 33 |
electrically responsive cell | 2.34e-09 | 39 |
electrically active cell | 2.34e-09 | 39 |
hippocampal neuron | 2.46e-09 | 3 |
striatum neuron | 6.14e-09 | 3 |
granule cell | 9.33e-09 | 3 |
neural cell | 3.24e-08 | 43 |
ectodermal cell | 5.79e-08 | 44 |
neurectodermal cell | 5.79e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 3.34e-10 | 41 |
respiratory system | 6.95e-10 | 42 |
lung | 9.06e-08 | 14 |
respiratory tube | 9.06e-08 | 14 |
respiration organ | 9.06e-08 | 14 |
pair of lungs | 9.06e-08 | 14 |
lung primordium | 9.06e-08 | 14 |
lung bud | 9.06e-08 | 14 |