FFCP PHASE1:Mm9::chr8:125000052..125000094,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:125000052..125000094,+
|short_description=p1@Ctu2
|description=CAGE_peak_1_at_Ctu2_5end
|association_with_transcript=9bp_to_ENSMUST00000116412,NM_153775,uc...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66965 | |EntrezGene=66965 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3U308 | |UniProt=Q3U308 | ||
|association_with_transcript=9bp_to_ENSMUST00000116412,NM_153775,uc009nsz.2,uc009nta.2_5end | |||
|cluster_id=chr8:125000052..125000094,+ | |||
|description=CAGE_peak_1_at_Ctu2_5end | |||
|id=chr8:125000052..125000094,+ | |||
|ontology_enrichment_celltype=CL:0000034!2.22e-16!97;CL:0000144!1.93e-15!121;CL:0000012!1.93e-15!121;CL:0000723!5.58e-15!91;CL:0000048!5.58e-15!91;CL:0002371!1.19e-14!118;CL:0000548!1.36e-14!115;CL:0000004!1.36e-14!115;CL:0000255!1.36e-14!115;CL:0000063!2.97e-12!66;CL:0002320!6.79e-12!46;CL:0000134!6.79e-12!46;CL:0000988!1.29e-11!32;CL:0002032!1.29e-11!32;CL:0000037!1.29e-11!32;CL:0000566!1.29e-11!32;CL:0000837!1.29e-11!32;CL:0000219!1.35e-10!54;CL:0002031!8.47e-09!25;CL:0000838!1.26e-08!12;CL:0000542!1.50e-08!13;CL:0000051!1.50e-08!13;CL:0000084!5.86e-08!11;CL:0000827!5.86e-08!11;CL:0000738!1.04e-07!17;CL:0002087!1.04e-07!17;CL:0000791!2.01e-07!9;CL:0000789!2.01e-07!9;CL:0002420!2.01e-07!9;CL:0002419!2.01e-07!9;CL:0000790!2.01e-07!9;CL:0000624!7.24e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.22e-16,97;CL:0000723,5.58e-15,91;CL:0000048,5.58e-15,91;CL:0002320,6.79e-12,46;CL:0000134,6.79e-12,46;CL:0000988,1.29e-11,32;CL:0002032,1.29e-11,32;CL:0000037,1.29e-11,32;CL:0000837,1.29e-11,32;CL:0000219,1.35e-10,54;CL:0002031,8.47e-09,25;CL:0000838,1.26e-08,12;CL:0000542,1.50e-08,13;CL:0000051,1.50e-08,13;CL:0000084,5.86e-08,11;CL:0000827,5.86e-08,11;CL:0000738,1.04e-07,17;CL:0002087,1.04e-07,17;CL:0000791,2.01e-07,9;CL:0000789,2.01e-07,9;CL:0002420,2.01e-07,9;CL:0002419,2.01e-07,9;CL:0000790,2.01e-07,9;CL:0000624,7.24e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.79e-12!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.79e-12,46 | |||
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| ||
|short_description=p1@Ctu2 | |||
}} | }} |
Latest revision as of 16:15, 1 October 2015
Short description: | p1@Ctu2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ctu2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENSMUST00000116412, NM_153775, uc009nsz.2, uc009nta.2_5end |
EntrezGene: | Ctu2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.22e-16 | 97 |
somatic stem cell | 5.58e-15 | 91 |
multi fate stem cell | 5.58e-15 | 91 |
connective tissue cell | 6.79e-12 | 46 |
mesenchymal cell | 6.79e-12 | 46 |
hematopoietic cell | 1.29e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.29e-11 | 32 |
hematopoietic stem cell | 1.29e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.29e-11 | 32 |
motile cell | 1.35e-10 | 54 |
hematopoietic lineage restricted progenitor cell | 8.47e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.26e-08 | 12 |
lymphocyte | 1.50e-08 | 13 |
common lymphoid progenitor | 1.50e-08 | 13 |
T cell | 5.86e-08 | 11 |
pro-T cell | 5.86e-08 | 11 |
leukocyte | 1.04e-07 | 17 |
nongranular leukocyte | 1.04e-07 | 17 |
mature alpha-beta T cell | 2.01e-07 | 9 |
alpha-beta T cell | 2.01e-07 | 9 |
immature T cell | 2.01e-07 | 9 |
mature T cell | 2.01e-07 | 9 |
immature alpha-beta T cell | 2.01e-07 | 9 |
CD4-positive, alpha-beta T cell | 7.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.79e-12 | 46 |