FFCP PHASE1:Mm9::chr1:82721484..82721518,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:82721484..82721518,+
|short_description=p1@LOC637796,p1@Mff
|description=CAGE_peak_1_at_LOC637796_5end,CAGE_peak_1_at_Mff_5end
|association_with_transcript...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=637796,75734 | |EntrezGene=637796,75734 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=788 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PCP5,E0CXE1,E0CYI3 | |UniProt=Q6PCP5,E0CXE1,E0CYI3 | ||
|association_with_transcript=0bp_to_ENSMUST00000073025,ENSMUST00000076837,ENSMUST00000160786,ENSMUST00000161572,ENSMUST00000161648,ENSMUST00000162056,NM_029409,uc007brx.1,uc007bry.1,uc007brz.1_5end | |||
|cluster_id=chr1:82721484..82721518,+ | |||
|description=CAGE_peak_1_at_LOC637796_5end,CAGE_peak_1_at_Mff_5end | |||
|id=chr1:82721484..82721518,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.84e-10!23;CL:0000337!2.84e-10!23;CL:0000540!2.39e-09!33;CL:0000047!2.39e-09!33;CL:0000031!2.39e-09!33;CL:0000404!2.39e-09!33;CL:0000393!1.63e-08!39;CL:0000211!1.63e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.84e-10,23;CL:0000337,2.84e-10,23;CL:0000540,2.39e-09,33;CL:0000047,2.39e-09,33;CL:0000031,2.39e-09,33;CL:0000404,2.39e-09,33;CL:0000393,1.63e-08,39;CL:0000211,1.63e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.56e-14!34;UBERON:0000033!3.47e-14!63;UBERON:0000073!1.26e-13!75;UBERON:0001016!1.26e-13!75;UBERON:0001017!3.27e-13!73;UBERON:0005743!3.27e-13!73;UBERON:0001049!3.35e-13!52;UBERON:0005068!3.35e-13!52;UBERON:0006241!3.35e-13!52;UBERON:0007135!3.35e-13!52;UBERON:0000955!2.52e-12!50;UBERON:0006238!2.52e-12!50;UBERON:0002791!2.96e-12!29;UBERON:0003528!2.96e-12!29;UBERON:0001893!2.96e-12!29;UBERON:0002346!6.12e-12!71;UBERON:0003075!6.12e-12!71;UBERON:0007284!6.12e-12!71;UBERON:0002616!6.32e-12!49;UBERON:0003056!1.38e-11!49;UBERON:0003080!2.31e-10!40;UBERON:0004121!2.75e-10!102;UBERON:0000924!2.75e-10!102;UBERON:0006601!2.75e-10!102;UBERON:0002780!7.18e-10!39;UBERON:0001890!7.18e-10!39;UBERON:0006240!7.18e-10!39;UBERON:0000025!7.81e-10!114;UBERON:0004111!6.17e-09!122;UBERON:0000956!1.05e-08!21;UBERON:0001869!1.05e-08!21;UBERON:0000203!1.05e-08!21;UBERON:0002619!3.49e-07!17;UBERON:0002021!6.51e-07!10;UBERON:0000411!6.51e-07!10;UBERON:0001950!6.51e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.70e-18,92;UBERON:0002346,2.53e-14,64;UBERON:0003075,2.53e-14,64;UBERON:0007284,2.53e-14,64;UBERON:0002020,2.56e-14,34;UBERON:0000073,5.79e-14,54;UBERON:0001016,1.26e-13,75;UBERON:0001017,3.27e-13,73;UBERON:0001049,3.35e-13,52;UBERON:0005068,3.35e-13,52;UBERON:0006241,3.35e-13,52;UBERON:0007135,3.35e-13,52;UBERON:0003528,2.96e-12,29;UBERON:0002791,2.96e-12,29;UBERON:0001893,2.96e-12,29;UBERON:0004121,7.05e-12,95;UBERON:0000924,7.05e-12,95;UBERON:0006601,7.05e-12,95;UBERON:0003056,1.38e-11,49;UBERON:0010371,1.43e-11,73;UBERON:0000955,3.72e-11,47;UBERON:0006238,3.72e-11,47;UBERON:0002616,9.11e-11,46;UBERON:0003080,2.31e-10,40;UBERON:0002780,7.18e-10,39;UBERON:0001890,7.18e-10,39;UBERON:0006240,7.18e-10,39;UBERON:0000025,7.81e-10,114;UBERON:0004111,6.17e-09,122;UBERON:0000956,1.05e-08,21;UBERON:0001869,1.05e-08,21;UBERON:0000203,1.05e-08,21;UBERON:0002619,3.49e-07,17;UBERON:0002021,6.51e-07,10;UBERON:0000411,6.51e-07,10;UBERON:0001950,6.51e-07,10 | |||
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| ||
|short_description=p1@LOC637796,p1@Mff | |||
}} | }} |
Latest revision as of 16:13, 1 October 2015
Short description: | p1@LOC637796, p1@Mff |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC637796_5end, CAGE_peak_1_at_Mff_5end |
Coexpression cluster: | MCL_coexpression_mm9:788 |
Association with transcript: | 0bp_to_ENSMUST00000073025, ENSMUST00000076837, ENSMUST00000160786, ENSMUST00000161572, ENSMUST00000161648, ENSMUST00000162056, NM_029409, uc007brx.1, uc007bry.1, uc007brz.1_5end |
EntrezGene: | 637796,75734 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.84e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.84e-10 | 23 |
neuron | 2.39e-09 | 33 |
neuronal stem cell | 2.39e-09 | 33 |
neuroblast | 2.39e-09 | 33 |
electrically signaling cell | 2.39e-09 | 33 |
electrically responsive cell | 1.63e-08 | 39 |
electrically active cell | 1.63e-08 | 39 |