FFCP PHASE1:Mm9::chr8:124956346..124956356,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13057 | |EntrezGene=13057 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1023 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=450bp_to_uc009nsr.1_5end | |association_with_transcript=450bp_to_uc009nsr.1_5end | ||
|cluster_id=chr8:124956346..124956356,- | |||
|description=CAGE_peak_4_at_Cyba_5end | |description=CAGE_peak_4_at_Cyba_5end | ||
|id=chr8:124956346..124956356,- | |id=chr8:124956346..124956356,- | ||
|ontology_enrichment_celltype=CL:0000063!9.12e-14!66;CL:0000988!1.47e-13!32;CL:0002032!1.47e-13!32;CL:0000037!1.47e-13!32;CL:0000566!1.47e-13!32;CL:0000837!1.47e-13!32;CL:0002320!3.45e-13!46;CL:0000134!3.45e-13!46;CL:0000838!1.47e-11!12;CL:0000542!1.67e-10!13;CL:0000051!1.67e-10!13;CL:0000219!2.36e-10!54;CL:0000791!3.14e-10!9;CL:0000789!3.14e-10!9;CL:0002420!3.14e-10!9;CL:0002419!3.14e-10!9;CL:0000790!3.14e-10!9;CL:0000084!4.94e-10!11;CL:0000827!4.94e-10!11;CL:0000624!6.12e-09!8;CL:0000144!1.08e-07!121;CL:0000012!1.08e-07!121;CL:0000738!1.54e-07!17;CL:0002087!1.54e-07!17;CL:0002031!7.15e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,6.14e-13,19;CL:0000988,4.25e-10,32;CL:0002032,4.25e-10,32;CL:0000037,4.25e-10,32;CL:0000837,4.25e-10,32;CL:0000557,1.40e-09,7;CL:0002320,7.66e-09,46;CL:0000134,7.66e-09,46;CL:0000945,6.57e-08,1;CL:0000236,6.57e-08,1;CL:0000826,6.57e-08,1;CL:0000213,1.05e-07,1;CL:0002078,1.05e-07,1;CL:0000115,1.05e-07,1;CL:0002262,1.05e-07,1;CL:1000398,1.05e-07,1;CL:0000219,2.03e-07,54;CL:0000034,2.41e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.45e-13!46;UBERON:0002193!5.47e-08!48;UBERON:0002390!1.02e-07!45;UBERON:0003061!1.02e-07!45;UBERON:0001474!1.33e-07!22;UBERON:0004765!1.33e-07!22;UBERON:0001434!1.33e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.66e-09,46;UBERON:0002394,1.05e-07,1;UBERON:0001281,1.05e-07,1;UBERON:0000353,1.05e-07,1;UBERON:0003497,1.05e-07,1;UBERON:0003909,1.05e-07,1;UBERON:0003928,1.05e-07,1;UBERON:0003835,1.05e-07,1;UBERON:0003513,1.05e-07,1;UBERON:0001280,1.05e-07,1;UBERON:0004647,1.05e-07,1;UBERON:0002294,1.05e-07,1;UBERON:0001173,1.05e-07,1;UBERON:0004912,1.05e-07,1;UBERON:0005171,1.05e-07,1 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.233612640595526,0.129123323441576,0.84473233291,0.468129052643987,0.171217968225505,0,0.171200729931206,0.262261207256992,0,0,0,0,0.548457734422955,0.84877930359606,0.0850432901510698,0.0992909512008853,0,0,0,0.57423196411502,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0.837063261473815,1.5626706890476,0,2.35292595212406,2.04913645487534,0,0,0,0,0,0,0,0,0,0,1.67782606057736,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,1.7972268675888,7.19883277192089,2.1601938602421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,2.31613116403244,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,1.86976272993241,1.39951452323658,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.233612640595526,0.129123323441576,0.84473233291,0.468129052643987,0.171217968225505,0,0.171200729931206,0.262261207256992,0,0,0,0,0.548457734422955,0.84877930359606,0.0850432901510698,0.0992909512008853,0,0,0,0.57423196411502,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0.837063261473815,1.5626706890476,0,2.35292595212406,2.04913645487534,0,0,0,0,0,0,0,0,0,0,1.67782606057736,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,1.7972268675888,7.19883277192089,2.1601938602421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,2.31613116403244,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,1.86976272993241,1.39951452323658,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@Cyba | |short_description=p4@Cyba | ||
}} | }} |
Latest revision as of 16:11, 1 October 2015
Short description: | p4@Cyba |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cyba_5end |
Coexpression cluster: | MCL_coexpression_mm9:1023 |
Association with transcript: | 450bp_to_uc009nsr.1_5end |
EntrezGene: | Cyba |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 6.14e-13 | 19 |
hematopoietic cell | 4.25e-10 | 32 |
hematopoietic oligopotent progenitor cell | 4.25e-10 | 32 |
hematopoietic stem cell | 4.25e-10 | 32 |
hematopoietic multipotent progenitor cell | 4.25e-10 | 32 |
granulocyte monocyte progenitor cell | 1.40e-09 | 7 |
connective tissue cell | 7.66e-09 | 46 |
mesenchymal cell | 7.66e-09 | 46 |
lymphocyte of B lineage | 6.57e-08 | 1 |
B cell | 6.57e-08 | 1 |
pro-B cell | 6.57e-08 | 1 |
lining cell | 1.05e-07 | 1 |
meso-epithelial cell | 1.05e-07 | 1 |
endothelial cell | 1.05e-07 | 1 |
endothelial cell of sinusoid | 1.05e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.05e-07 | 1 |
motile cell | 2.03e-07 | 54 |
stem cell | 2.41e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.66e-09 | 46 |
bile duct | 1.05e-07 | 1 |
hepatic sinusoid | 1.05e-07 | 1 |
parenchyma | 1.05e-07 | 1 |
abdomen blood vessel | 1.05e-07 | 1 |
sinusoid | 1.05e-07 | 1 |
digestive system duct | 1.05e-07 | 1 |
abdominal segment blood vessel | 1.05e-07 | 1 |
trunk blood vessel | 1.05e-07 | 1 |
liver parenchyma | 1.05e-07 | 1 |
liver lobule | 1.05e-07 | 1 |
biliary system | 1.05e-07 | 1 |
biliary tree | 1.05e-07 | 1 |
biliary bud | 1.05e-07 | 1 |
hepatic duct | 1.05e-07 | 1 |