Personal tools

FFCP PHASE1:Mm9::chr5:113709567..113709589,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr5:113709567..113709589,- |short_description=p4@Sgsm1 |description=CAGE_peak_4_at_Sgsm1_5end |association_with_transcript=17bp_to_ENSMUST00000112324_5end |En...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:113709567..113709589,-
|DHSsupport=NA
|short_description=p4@Sgsm1
|DPIdataset=NA
|description=CAGE_peak_4_at_Sgsm1_5end
|association_with_transcript=17bp_to_ENSMUST00000112324_5end
|EntrezGene=52850
|EntrezGene=52850
|HGNC=
|HGNC=
|MCL_coexpression_id=106
|TSSclassifier=NA
|UniProt=D3Z7V5
|UniProt=D3Z7V5
|association_with_transcript=17bp_to_ENSMUST00000112324_5end
|cluster_id=chr5:113709567..113709589,-
|description=CAGE_peak_4_at_Sgsm1_5end
|id=chr5:113709567..113709589,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.58e-09,23;UBERON:0009856,2.58e-09,23;UBERON:0002107,3.76e-08,22;UBERON:0007499,3.76e-08,22;UBERON:0006925,3.76e-08,22;UBERON:0009497,3.76e-08,22;UBERON:0000015,3.76e-08,22;UBERON:0002423,3.76e-08,22;UBERON:0006235,3.76e-08,22;UBERON:0008835,3.76e-08,22;UBERON:0003894,3.76e-08,22;UBERON:0004161,3.76e-08,22;UBERON:0008836,3.76e-08,22;UBERON:0002365,5.01e-08,25;UBERON:0002330,5.01e-08,25;UBERON:0005256,5.20e-08,45;UBERON:0003104,9.77e-07,61;UBERON:0009142,9.77e-07,61
|phase1_expression=0.480446541314382,0.697950815278722,0,0.30246421130683,1.00179145989269,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0.47997726838022,0.68822784320151,0.57423196411502,0,0.430942465371778,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,0.577703239502549,1.32987716286794,1.42918549383658,0,0,0,0,0,0,1.1330713617802,1.4192770370732,1.83546752161682,0.782391344348039,3.2703773457067,1.75748946187577,0.194429899074283,1.81982348112971,4.31257693094915,0,0,0,0.771778308107841,0,0,0,0,0,0.338844532069132,0,0,0,0,0.898800331555214,0.384218305321555,0.207379224616955,0.405017814995072,0,0.571301968807607,0.220868540951614,0.367472397644862,0.670918297127655,0,0,0,0.153606533256243,0.131886287730194,0.365950574409639,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,3.3319525066601,1.81371744256285,0,0,0,1.61910957491345,2.59910566979068,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,1.08245520505607,0.506719730950197,0,0.11418387971906,0,0,0.867426633830679,0.304465478312141,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0,0,3.72783522436244,0,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0,0,0,0,0.486723789203273,0.203678727700633,0.497627882440372,1.76905930903572,1.89397670297827,0.910843100738926,0.689706313300419,0.180062129805349,0.753524089178575,0.680364991513279,0.768682321709099,0.187403449119458,0.517406741478031,3.01795190105979,0.378212160335639,0.175951124163949,0.43839146485515,0.556094498451196,0,0,0.398068533636986,0,0,0,1.03562886267751,0.469052119962192,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,0,0.205809224758569,0,1.05780226665418,0.853153002140936,1.16118335930219,1.15980715189884,2.01683524623343,2.00140239460383,1.33157938278791,0.474529061544512,0.494096864172033,0,0,0.58489226135736,1.79763881730844,0.648414149624083,0.398282546508734,1.13800740571849,0.571242563048644,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0,0.156998727841375,0.123397163921801,2.37162101669719,0.83422552858047,0.786235980452812,1.12431056192427,1.01430060694251,1.4470629585145,1.52775511068852,2.01387296215567,0.324270453550071,0.823684239564244,1.43768206527355,0,2.18426371180192,4.2938409251009,4.66433275156972,0.482443521363367,0.184753190166605,0.189491411770485,0,1.01847051465113,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.478364305972461,0,0.518054945597687,0.144649058581512,0,0,0,0,0.80275294993896,0.35163505977661,0,0,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0,0.404810701674894,0.584511715822624,0,0,0.425820255624806,0.178065603667255,0,0.329940245945071,0,0.485561272309963,0.302323556964751,1.88605079755898,2.06711325016541,1.53717573971964,0.516856586336442,0,0.356497378384721,0.632073515871632,2.10837217149998,0,0.340439605753788,0.540183282093931,0.776152102696527,0.428674070063185,0.532020700926821,0.178368817602071,0.164549020602121,0,3.05073220482823,0.63549621259146,1.32317038832977,0,0.161464426695906,0,0,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0.474503990371703,0.406638934253697,0.86404272657441,1.25452977608681,1.31017538247707,0.404593039154462,0.743881101528023,0.26175594198403,1.42576470620972,1.24267862617385,0,0.598066184175915,0.330916980914195,0.583353565032143,0.258319646955462,0.337912250981556,0,0,0.314578033277133,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.443971906748129,0.986852422704233,0.671538465456314,0.386379188064381,16.8914227906064,9.52388446189778,1.2862102744744,2.00628841614145,0,0,0,0,0,0,0,0,0,0,1.764384908931,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.551530525350042,0.666740183404846,0.412070114477788,1.60459604795908,0.758091635291392,0.760437899670719,0.377252682772152,0.37456602987953,0.320125762024346,0.34461281373368,0,0.695305955669133,0.578727661391115,0,0.294397840268795,0.342869252385415,1.24233064311536,0,0.436039249896986,0.564656282491984,0.338458431566706,0,0,0.543216455383447,0.561142271657738,0.355905054372522,0.591026894253381,2.04615521584845,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0,0,0
|phase1_expression=0.480446541314382,0.697950815278722,0,0.30246421130683,1.00179145989269,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0.47997726838022,0.68822784320151,0.57423196411502,0,0.430942465371778,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,0.577703239502549,1.32987716286794,1.42918549383658,0,0,0,0,0,0,1.1330713617802,1.4192770370732,1.83546752161682,0.782391344348039,3.2703773457067,1.75748946187577,0.194429899074283,1.81982348112971,4.31257693094915,0,0,0,0.771778308107841,0,0,0,0,0,0.338844532069132,0,0,0,0,0.898800331555214,0.384218305321555,0.207379224616955,0.405017814995072,0,0.571301968807607,0.220868540951614,0.367472397644862,0.670918297127655,0,0,0,0.153606533256243,0.131886287730194,0.365950574409639,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,3.3319525066601,1.81371744256285,0,0,0,1.61910957491345,2.59910566979068,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,1.08245520505607,0.506719730950197,0,0.11418387971906,0,0,0.867426633830679,0.304465478312141,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0,0,3.72783522436244,0,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0,0,0,0,0.486723789203273,0.203678727700633,0.497627882440372,1.76905930903572,1.89397670297827,0.910843100738926,0.689706313300419,0.180062129805349,0.753524089178575,0.680364991513279,0.768682321709099,0.187403449119458,0.517406741478031,3.01795190105979,0.378212160335639,0.175951124163949,0.43839146485515,0.556094498451196,0,0,0.398068533636986,0,0,0,1.03562886267751,0.469052119962192,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,0,0.205809224758569,0,1.05780226665418,0.853153002140936,1.16118335930219,1.15980715189884,2.01683524623343,2.00140239460383,1.33157938278791,0.474529061544512,0.494096864172033,0,0,0.58489226135736,1.79763881730844,0.648414149624083,0.398282546508734,1.13800740571849,0.571242563048644,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0,0.156998727841375,0.123397163921801,2.37162101669719,0.83422552858047,0.786235980452812,1.12431056192427,1.01430060694251,1.4470629585145,1.52775511068852,2.01387296215567,0.324270453550071,0.823684239564244,1.43768206527355,0,2.18426371180192,4.2938409251009,4.66433275156972,0.482443521363367,0.184753190166605,0.189491411770485,0,1.01847051465113,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.478364305972461,0,0.518054945597687,0.144649058581512,0,0,0,0,0.80275294993896,0.35163505977661,0,0,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0,0.404810701674894,0.584511715822624,0,0,0.425820255624806,0.178065603667255,0,0.329940245945071,0,0.485561272309963,0.302323556964751,1.88605079755898,2.06711325016541,1.53717573971964,0.516856586336442,0,0.356497378384721,0.632073515871632,2.10837217149998,0,0.340439605753788,0.540183282093931,0.776152102696527,0.428674070063185,0.532020700926821,0.178368817602071,0.164549020602121,0,3.05073220482823,0.63549621259146,1.32317038832977,0,0.161464426695906,0,0,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0.474503990371703,0.406638934253697,0.86404272657441,1.25452977608681,1.31017538247707,0.404593039154462,0.743881101528023,0.26175594198403,1.42576470620972,1.24267862617385,0,0.598066184175915,0.330916980914195,0.583353565032143,0.258319646955462,0.337912250981556,0,0,0.314578033277133,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.443971906748129,0.986852422704233,0.671538465456314,0.386379188064381,16.8914227906064,9.52388446189778,1.2862102744744,2.00628841614145,0,0,0,0,0,0,0,0,0,0,1.764384908931,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.551530525350042,0.666740183404846,0.412070114477788,1.60459604795908,0.758091635291392,0.760437899670719,0.377252682772152,0.37456602987953,0.320125762024346,0.34461281373368,0,0.695305955669133,0.578727661391115,0,0.294397840268795,0.342869252385415,1.24233064311536,0,0.436039249896986,0.564656282491984,0.338458431566706,0,0,0.543216455383447,0.561142271657738,0.355905054372522,0.591026894253381,2.04615521584845,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0,0,0
|short_description=p4@Sgsm1
}}
}}

Latest revision as of 16:01, 1 October 2015

Short description:p4@Sgsm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sgsm1_5end
Coexpression cluster:MCL_coexpression_mm9:106
Association with transcript: 17bp_to_ENSMUST00000112324_5end
EntrezGene:Sgsm1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sgsm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D93.33
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H14.66
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F516.89
uterus, adult.CNhs10509.92-27E59.52
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum2.58e-0923
sac2.58e-0923
liver3.76e-0822
epithelial sac3.76e-0822
digestive gland3.76e-0822
epithelium of foregut-midgut junction3.76e-0822
anatomical boundary3.76e-0822
hepatobiliary system3.76e-0822
foregut-midgut junction3.76e-0822
hepatic diverticulum3.76e-0822
liver primordium3.76e-0822
septum transversum3.76e-0822
liver bud3.76e-0822
exocrine gland5.01e-0825
exocrine system5.01e-0825
trunk mesenchyme5.20e-0845
mesenchyme9.77e-0761
entire embryonic mesenchyme9.77e-0761
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:113709567..113709589,-&oldid=4310705"