FFCP PHASE1:Mm9::chr13:45602967..45603019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66355 | |EntrezGene=66355 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9DCZ1 | |UniProt=Q9DCZ1 | ||
|association_with_transcript=129bp_to_NM_025508,uc007qha.1_5end | |association_with_transcript=129bp_to_NM_025508,uc007qha.1_5end | ||
|cluster_id=chr13:45602967..45603019,+ | |||
|description=CAGE_peak_3_at_Gmpr_5end | |description=CAGE_peak_3_at_Gmpr_5end | ||
|id=chr13:45602967..45603019,+ | |id=chr13:45602967..45603019,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.17e-11!52;UBERON:0005068!7.17e-11!52;UBERON:0006241!7.17e-11!52;UBERON:0007135!7.17e-11!52;UBERON:0000955!1.32e-10!50;UBERON:0006238!1.32e-10!50;UBERON:0001017!2.36e-10!73;UBERON:0005743!2.36e-10!73;UBERON:0002616!3.33e-10!49;UBERON:0002020!3.73e-10!34;UBERON:0000073!1.97e-09!75;UBERON:0001016!1.97e-09!75;UBERON:0003103!5.41e-09!43;UBERON:0002791!1.37e-08!29;UBERON:0003528!1.37e-08!29;UBERON:0001893!1.37e-08!29;UBERON:0000025!7.87e-08!114;UBERON:0002346!8.59e-08!71;UBERON:0003075!8.59e-08!71;UBERON:0007284!8.59e-08!71;UBERON:0004111!1.36e-07!122;UBERON:0002619!2.41e-07!17;UBERON:0000033!2.61e-07!63;UBERON:0002021!3.10e-07!10;UBERON:0000411!3.10e-07!10;UBERON:0001950!3.10e-07!10;UBERON:0003080!3.74e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.43e-13,92;UBERON:0000073,7.35e-12,54;UBERON:0001049,6.34e-11,52;UBERON:0005068,6.34e-11,52;UBERON:0006241,6.34e-11,52;UBERON:0007135,6.34e-11,52;UBERON:0002020,3.33e-10,34;UBERON:0001017,3.38e-10,73;UBERON:0001016,2.94e-09,75;UBERON:0000955,3.43e-09,47;UBERON:0006238,3.43e-09,47;UBERON:0003103,4.90e-09,43;UBERON:0002616,8.39e-09,46;UBERON:0003528,1.25e-08,29;UBERON:0002791,1.25e-08,29;UBERON:0001893,1.25e-08,29;UBERON:0000025,7.17e-08,114;UBERON:0002346,1.36e-07,64;UBERON:0003075,1.36e-07,64;UBERON:0007284,1.36e-07,64;UBERON:0004111,1.42e-07,122;UBERON:0002619,2.24e-07,17;UBERON:0002021,2.88e-07,10;UBERON:0000411,2.88e-07,10;UBERON:0001950,2.88e-07,10;UBERON:0003080,3.47e-07,40 | |||
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|phase1_expression=1.92178616525753,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,0,0.404950534779652,0.699561878128147,0,0.137114433605739,0.42438965179803,6.4632900514813,0.992909512008853,0.522399578277871,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0.443461021310609,7.62036808151557,6.76571266343027,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0,4.90997590104751,3.85232338634155,2.38610777810186,1.56478268869608,12.8634842264463,16.4764637050854,11.4713640453827,5.73944328663986,21.5628846547457,0.335565212115473,0,0,1.28629718017973,4.01146815914259,9.7977697532714,3.23706337375356,4.23192783417626,7.60597684207415,1.0165335962074,7.11435836888911,6.29929802096979,5.93319817540185,3.5524005747305,10.4860038681442,16.5213871288268,2.38486108309499,4.18518408828241,2.10324961351382,18.5673139862472,16.3442720304194,2.57230678351403,3.35459148563827,4.5960939330501,16.5173821499083,22.7283461791634,21.6585211891303,2.76961204233407,4.84884511092771,4.16730696445408,29.0350318961436,23.0732670112989,18.9469827243245,7.66034322231536,10.5355043791336,5.59198337475902,0.302904773332736,1.51143120213571,4.92769630792852,0,0,0,0,0,11.6568868709354,3.74946709671727,4.1565760736459,1.7666978725517,1.26759077799012,1.28326477414318,2.54805239706646,0,6.061749148314,6.08063677140237,4.04419556011827,1.82694207550496,2.33044095282455,5.34391700633369,4.16364784238726,4.87144765299426,4.15107895060905,4.82312449768392,5.64425794251383,3.39299796590124,7.91023896749996,7.51916655983541,7.96149496754887,13.5884153955824,12.1462835153216,4.84875253135222,9.31958806090611,10.2473278954042,10.4723353406728,2.04365644166873,2.39630249011841,1.19980546198682,2.79554499560742,26.8125244534633,28.3650373747548,7.16229807043327,23.1186345855728,20.2015211290961,19.3242881440391,18.4955039897244,2.34230536855727,5.349499736234,2.27450482590307,6.73413938836717,1.43132487258974,1.60931473103431,1.26043490863744,2.10986744970001,1.97305847538851,1.40925092313335,2.52994656311268,7.24369438069244,1.29340795759705,2.08016688184601,2.81521798662318,2.19195732427575,1.66828349535359,3.1342694986995,2.26360350048738,3.38358253591438,2.1066395619397,2.31613116403244,2.27330799516474,8.69928244649108,8.20841209933837,7.92273070428465,8.99629995223799,10.0349758191176,11.2614992407786,16.0448421877781,10.9992094573844,14.5956677958962,15.1395061920402,18.3867559768587,17.1055188141756,17.9825984533159,26.7851140655082,19.1915178827332,32.5949420274397,4.32199371992995,0,0,2.55945900642281,2.78684006232526,1.9330119198314,1.4117846723634,0.889512175379481,3.04361001780095,1.89811624617805,1.64698954724011,1.75934646160189,1.79060824837036,2.14460495831032,0,2.37751854862164,3.78368419183298,4.55202962287396,1.82797620175566,5.63538678365402,4.2766778847516,4.26695471768777,5.33032231166421,5.6280518040589,7.82333784291891,8.94892748695836,9.37818445805684,0,10.1775514486817,9.04171377520734,10.5685192820881,7.91154473415161,8.20002343158217,5.60176873919124,5.17853047411459,3.72911021582581,1.09824565275233,1.43768206527355,1.48856379067401,0.624075346229121,0.505157755894224,0.896987067609561,0,2.58654466233247,2.65287976478679,0.977789858652155,2.71592137240301,1.40814148973101,2.68010011906905,1.6663054862021,1.17080188714679,2.83743259391144,2.87904096543407,2.39182152986231,2.13022309130459,3.9717545829156,3.03763023021174,3.01582567878545,3.26343410291226,0.491764273019036,1.10374698521893,30.3440615076927,24.0283957514016,0.491804836130026,33.0736914637729,2.52406575533005,1.95219372148319,1.50796378412959,2.38968797952552,1.55959071857676,0.849229592366497,0.809621403349789,2.63030272120181,2.37172666767914,12.2102100240287,5.25178315270594,2.49291845134157,4.39794790254655,4.45419332025846,0,2.42780636154981,2.11626489875326,2.26326095707078,3.2483208216885,1.22974059177571,3.10113951801865,1.09060118843252,4.63446591900138,2.52829406348653,0,0,3.74483566329167,1.44048875225048,1.94038025674132,1.50035924522115,1.41872186913819,3.0322698992352,2.63278432963394,2.74018454203139,1.64270195644597,5.2958017715955,7.71849393192367,2.30840754118072,4.19807509409354,2.11095237248546,1.07435109602823,0.492422699235184,0.582961673259701,30.7806001337446,0.512612642393558,2.68302928352189,3.51869602002452,2.0720530270516,0.683471138605126,0.686334519619568,2.88963330989554,3.63873776041511,3.17859939750175,7.63736494412091,2.53068794864908,3.45643094115643,1.72808545314882,2.92723614420256,5.02233896616208,3.64133735239016,3.88471241909079,7.0674104335688,6.22151871800606,0.621339313086926,1.12738587736838,4.18646328923141,6.28742263736971,5.05573089694524,6.32883135040882,4.73077151374179,3.87278887530988,3.6457227756306,2.83120229949419,0.483168241652012,3.16833006883652,4.10814456816632,2.63542779877213,5.75181360123033,6.49604114888975,3.04345382634718,2.78153896693771,3.72605893511903,2.21534290761866,3.12995994839258,2.66723823292499,2.72230699869469,2.63136277997332,1.53938946624527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| ||
|short_description=p3@Gmpr | |short_description=p3@Gmpr | ||
}} | }} |
Latest revision as of 15:50, 1 October 2015
Short description: | p3@Gmpr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gmpr_5end |
Coexpression cluster: | NA |
Association with transcript: | 129bp_to_NM_025508, uc007qha.1_5end |
EntrezGene: | Gmpr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 8.43e-13 | 92 |
regional part of nervous system | 7.35e-12 | 54 |
neural tube | 6.34e-11 | 52 |
neural rod | 6.34e-11 | 52 |
future spinal cord | 6.34e-11 | 52 |
neural keel | 6.34e-11 | 52 |
gray matter | 3.33e-10 | 34 |
central nervous system | 3.38e-10 | 73 |
nervous system | 2.94e-09 | 75 |
brain | 3.43e-09 | 47 |
future brain | 3.43e-09 | 47 |
compound organ | 4.90e-09 | 43 |
regional part of brain | 8.39e-09 | 46 |
brain grey matter | 1.25e-08 | 29 |
regional part of telencephalon | 1.25e-08 | 29 |
telencephalon | 1.25e-08 | 29 |
tube | 7.17e-08 | 114 |
neurectoderm | 1.36e-07 | 64 |
neural plate | 1.36e-07 | 64 |
presumptive neural plate | 1.36e-07 | 64 |
anatomical conduit | 1.42e-07 | 122 |
regional part of cerebral cortex | 2.24e-07 | 17 |
occipital lobe | 2.88e-07 | 10 |
visual cortex | 2.88e-07 | 10 |
neocortex | 2.88e-07 | 10 |
anterior neural tube | 3.47e-07 | 40 |