FFCP PHASE1:Mm9::chr11:52045677..52045682,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21402 | |EntrezGene=21402 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q9WTX5 | |UniProt=Q9WTX5 | ||
|association_with_transcript=-8bp_to_ENSMUST00000109072_5end | |association_with_transcript=-8bp_to_ENSMUST00000109072_5end | ||
|cluster_id=chr11:52045677..52045682,+ | |||
|description=CAGE_peak_6_at_Skp1a_5end | |description=CAGE_peak_6_at_Skp1a_5end | ||
|id=chr11:52045677..52045682,+ | |id=chr11:52045677..52045682,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002259,1.55e-13,1;UBERON:0002314,1.55e-13,1;UBERON:0004061,1.55e-13,1;UBERON:0006777,1.55e-13,1;UBERON:0005882,1.55e-13,1;UBERON:0000473,6.83e-09,14;UBERON:0003135,2.43e-08,15;UBERON:0003101,7.36e-08,16;UBERON:0000079,7.36e-08,16;UBERON:0004176,1.96e-07,17;UBERON:0009196,1.96e-07,17;UBERON:0009117,1.96e-07,17;UBERON:0000991,4.71e-07,18;UBERON:0005564,4.71e-07,18 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0.383062014255563,0,0,0,0,0,0.56276261003168,0,0.883885756421003,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0.599902730993408,0,1.04853447583376,0,0,0.521472960576829,0.511430914660661,1.0389402227978,0.162241263067758,0,0,0.252722758433675,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2738587736838,0,0,0,0,0,0.117357238645754,0,0.104859344425711,3.14059357073808,7.4887801627045,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0,0,0.183151624267265,0,0,0,0,0,0.515559547031063,0.685082519770642,0,1.35004500046361,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0.309873682371932,0,0,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0.383062014255563,0,0,0,0,0,0.56276261003168,0,0.883885756421003,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0.599902730993408,0,1.04853447583376,0,0,0.521472960576829,0.511430914660661,1.0389402227978,0.162241263067758,0,0,0.252722758433675,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2738587736838,0,0,0,0,0,0.117357238645754,0,0.104859344425711,3.14059357073808,7.4887801627045,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0,0,0.183151624267265,0,0,0,0,0,0.515559547031063,0.685082519770642,0,1.35004500046361,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0.309873682371932,0,0,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p6@Skp1a | |short_description=p6@Skp1a | ||
}} | }} |
Latest revision as of 15:48, 1 October 2015
Short description: | p6@Skp1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Skp1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -8bp_to_ENSMUST00000109072_5end |
EntrezGene: | Skp1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpora quadrigemina | 1.55e-13 | 1 |
midbrain tectum | 1.55e-13 | 1 |
neural tube mantle layer | 1.55e-13 | 1 |
tectal plate | 1.55e-13 | 1 |
neural tube alar plate | 1.55e-13 | 1 |
testis | 6.83e-09 | 14 |
male reproductive organ | 2.43e-08 | 15 |
male organism | 7.36e-08 | 16 |
male reproductive system | 7.36e-08 | 16 |
external genitalia | 1.96e-07 | 17 |
indifferent external genitalia | 1.96e-07 | 17 |
indifferent gonad | 1.96e-07 | 17 |
gonad | 4.71e-07 | 18 |
gonad primordium | 4.71e-07 | 18 |