FFCP PHASE1:Mm9::chr13:44936055..44936066,+: Difference between revisions
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{{FFCP|EntrezGene=16468|HGNC=|MCL_coexpression_id=1346|UniProt=G3UZT8|association_with_transcript=0bp_to_ENSMUST00000173906_5end|description=CAGE_peak_20_at_Jarid2_5end|id=chr13:44936055..44936066,+|ontology_enrichment_celltype=CL:0000540!3.49e-30!33;CL:0000047!3.49e-30!33;CL:0000031!3.49e-30!33;CL:0000404!3.49e-30!33;CL:0000117!6.67e-24!23;CL:0000337!6.67e-24!23;CL:0000393!1.15e-23!39;CL:0000211!1.15e-23!39;CL:0002319!2.32e-20!43;CL:0000221!1.24e-19!44;CL:0000133!1.24e-19!44;CL:0000055!6.68e-16!50;CL:0000107!1.64e-08!9;CL:0002321!2.34e-08!70;CL:0000220!2.34e-08!70;CL:0002609!4.21e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,8.09e-29,23;CL:0000337,8.09e-29,23;CL:0000540,5.68e-24,33;CL:0000047,5.68e-24,33;CL:0000031,5.68e-24,33;CL:0000404,5.68e-24,33;CL:0000393,3.90e-20,39;CL:0000211,3.90e-20,39;CL:0002319,3.60e-18,43;CL:0000221,9.82e-18,44;CL:0000133,9.82e-18,44;CL:0002321,9.59e-11,70;CL:0002608,2.41e-10,3;CL:0002612,2.41e-10,3;CL:0000120,2.97e-10,3;CL:0002613,4.52e-10,3;CL:0000723,5.44e-08,91;CL:0000048,5.44e-08,91;CL:0000034,2.03e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.79e-27!73;UBERON:0005743!4.79e-27!73;UBERON:0000073!7.36e-26!75;UBERON:0001016!7.36e-26!75;UBERON:0004121!1.17e-20!102;UBERON:0000924!1.17e-20!102;UBERON:0006601!1.17e-20!102;UBERON:0002346!6.85e-18!71;UBERON:0003075!6.85e-18!71;UBERON:0007284!6.85e-18!71;UBERON:0001049!2.26e-16!52;UBERON:0005068!2.26e-16!52;UBERON:0006241!2.26e-16!52;UBERON:0007135!2.26e-16!52;UBERON:0000955!7.22e-15!50;UBERON:0006238!7.22e-15!50;UBERON:0002020!9.67e-15!34;UBERON:0002616!4.62e-14!49;UBERON:0000033!8.05e-13!63;UBERON:0003080!4.14e-11!40;UBERON:0003056!8.98e-11!49;UBERON:0002780!2.12e-10!39;UBERON:0001890!2.12e-10!39;UBERON:0006240!2.12e-10!39;UBERON:0002791!2.19e-10!29;UBERON:0003528!2.19e-10!29;UBERON:0001893!2.19e-10!29;UBERON:0002410!1.64e-08!9;UBERON:0002240!7.93e-07!6;UBERON:0005174!7.93e-07!6;UBERON:0001137!7.93e-07!6;UBERON:0002420!9.69e-07!8;UBERON:0007245!9.69e-07!8;UBERON:0010009!9.69e-07!8;UBERON:0010011!9.69e-07!8;UBERON:0000454!9.69e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.48e-12,73;UBERON:0002020,2.90e-12,34;UBERON:0001016,5.69e-12,75;UBERON:0002257,2.41e-10,3;UBERON:0000073,2.20e-09,54;UBERON:0004121,3.42e-09,95;UBERON:0000924,3.42e-09,95;UBERON:0006601,3.42e-09,95;UBERON:0003528,3.37e-08,29;UBERON:0002791,3.37e-08,29;UBERON:0001893,3.37e-08,29;UBERON:0002420,3.77e-08,8;UBERON:0007245,3.77e-08,8;UBERON:0010009,3.77e-08,8;UBERON:0010011,3.77e-08,8;UBERON:0000454,3.77e-08,8;UBERON:0001049,9.17e-08,52;UBERON:0005068,9.17e-08,52;UBERON:0006241,9.17e-08,52;UBERON:0007135,9.17e-08,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.270011876663381,0.420649922702764,0.285650984403804,0.883474163806454,1.95985278743926,2.01275489138296,0.919218786610021,1.10115880999389,0.638436690425939,0.46081959976873,1.71452174049252,1.37231465403614,0.52091337055676,1.11673199600552,0.56276261003168,0.30559649555362,1.47314292736834,0.996601765593721,3.35519002485541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.599162557619291,0,0.628271760564322,0.173824320192276,0.767146371990992,0.62336413367868,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.222798674082394,1.13230612315533,0.404810701674894,0.876767573733936,0.790575555893047,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,1.35004500046361,0.45032120322422,0,0.51776031175182,0.62272408550506,1.19707462020309,0.682934423016537,0.243106717068294,0.628839487883947,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.565879024158229,0,0,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0.499621155875892,0,0,0,0,0|short_description=p20@Jarid2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16468 | |||
|HGNC= | |||
|MCL_coexpression_id=1346 | |||
|TSSclassifier=NA | |||
|UniProt=G3UZT8 | |||
|association_with_transcript=0bp_to_ENSMUST00000173906_5end | |||
|cluster_id=chr13:44936055..44936066,+ | |||
|description=CAGE_peak_20_at_Jarid2_5end | |||
|id=chr13:44936055..44936066,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.49e-30!33;CL:0000047!3.49e-30!33;CL:0000031!3.49e-30!33;CL:0000404!3.49e-30!33;CL:0000117!6.67e-24!23;CL:0000337!6.67e-24!23;CL:0000393!1.15e-23!39;CL:0000211!1.15e-23!39;CL:0002319!2.32e-20!43;CL:0000221!1.24e-19!44;CL:0000133!1.24e-19!44;CL:0000055!6.68e-16!50;CL:0000107!1.64e-08!9;CL:0002321!2.34e-08!70;CL:0000220!2.34e-08!70;CL:0002609!4.21e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.09e-29,23;CL:0000337,8.09e-29,23;CL:0000540,5.68e-24,33;CL:0000047,5.68e-24,33;CL:0000031,5.68e-24,33;CL:0000404,5.68e-24,33;CL:0000393,3.90e-20,39;CL:0000211,3.90e-20,39;CL:0002319,3.60e-18,43;CL:0000221,9.82e-18,44;CL:0000133,9.82e-18,44;CL:0002321,9.59e-11,70;CL:0002608,2.41e-10,3;CL:0002612,2.41e-10,3;CL:0000120,2.97e-10,3;CL:0002613,4.52e-10,3;CL:0000723,5.44e-08,91;CL:0000048,5.44e-08,91;CL:0000034,2.03e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.79e-27!73;UBERON:0005743!4.79e-27!73;UBERON:0000073!7.36e-26!75;UBERON:0001016!7.36e-26!75;UBERON:0004121!1.17e-20!102;UBERON:0000924!1.17e-20!102;UBERON:0006601!1.17e-20!102;UBERON:0002346!6.85e-18!71;UBERON:0003075!6.85e-18!71;UBERON:0007284!6.85e-18!71;UBERON:0001049!2.26e-16!52;UBERON:0005068!2.26e-16!52;UBERON:0006241!2.26e-16!52;UBERON:0007135!2.26e-16!52;UBERON:0000955!7.22e-15!50;UBERON:0006238!7.22e-15!50;UBERON:0002020!9.67e-15!34;UBERON:0002616!4.62e-14!49;UBERON:0000033!8.05e-13!63;UBERON:0003080!4.14e-11!40;UBERON:0003056!8.98e-11!49;UBERON:0002780!2.12e-10!39;UBERON:0001890!2.12e-10!39;UBERON:0006240!2.12e-10!39;UBERON:0002791!2.19e-10!29;UBERON:0003528!2.19e-10!29;UBERON:0001893!2.19e-10!29;UBERON:0002410!1.64e-08!9;UBERON:0002240!7.93e-07!6;UBERON:0005174!7.93e-07!6;UBERON:0001137!7.93e-07!6;UBERON:0002420!9.69e-07!8;UBERON:0007245!9.69e-07!8;UBERON:0010009!9.69e-07!8;UBERON:0010011!9.69e-07!8;UBERON:0000454!9.69e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.48e-12,73;UBERON:0002020,2.90e-12,34;UBERON:0001016,5.69e-12,75;UBERON:0002257,2.41e-10,3;UBERON:0000073,2.20e-09,54;UBERON:0004121,3.42e-09,95;UBERON:0000924,3.42e-09,95;UBERON:0006601,3.42e-09,95;UBERON:0003528,3.37e-08,29;UBERON:0002791,3.37e-08,29;UBERON:0001893,3.37e-08,29;UBERON:0002420,3.77e-08,8;UBERON:0007245,3.77e-08,8;UBERON:0010009,3.77e-08,8;UBERON:0010011,3.77e-08,8;UBERON:0000454,3.77e-08,8;UBERON:0001049,9.17e-08,52;UBERON:0005068,9.17e-08,52;UBERON:0006241,9.17e-08,52;UBERON:0007135,9.17e-08,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.270011876663381,0.420649922702764,0.285650984403804,0.883474163806454,1.95985278743926,2.01275489138296,0.919218786610021,1.10115880999389,0.638436690425939,0.46081959976873,1.71452174049252,1.37231465403614,0.52091337055676,1.11673199600552,0.56276261003168,0.30559649555362,1.47314292736834,0.996601765593721,3.35519002485541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.599162557619291,0,0.628271760564322,0.173824320192276,0.767146371990992,0.62336413367868,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.222798674082394,1.13230612315533,0.404810701674894,0.876767573733936,0.790575555893047,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,1.35004500046361,0.45032120322422,0,0.51776031175182,0.62272408550506,1.19707462020309,0.682934423016537,0.243106717068294,0.628839487883947,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.565879024158229,0,0,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0.499621155875892,0,0,0,0,0 | |||
|short_description=p20@Jarid2 | |||
}} |
Latest revision as of 15:43, 1 October 2015
Short description: | p20@Jarid2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_Jarid2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1346 |
Association with transcript: | 0bp_to_ENSMUST00000173906_5end |
EntrezGene: | Jarid2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.09e-29 | 23 |
neuroblast (sensu Vertebrata) | 8.09e-29 | 23 |
neuron | 5.68e-24 | 33 |
neuronal stem cell | 5.68e-24 | 33 |
neuroblast | 5.68e-24 | 33 |
electrically signaling cell | 5.68e-24 | 33 |
electrically responsive cell | 3.90e-20 | 39 |
electrically active cell | 3.90e-20 | 39 |
neural cell | 3.60e-18 | 43 |
ectodermal cell | 9.82e-18 | 44 |
neurectodermal cell | 9.82e-18 | 44 |
embryonic cell | 9.59e-11 | 70 |
hippocampal neuron | 2.41e-10 | 3 |
neuron of the ventral spinal cord | 2.41e-10 | 3 |
granule cell | 2.97e-10 | 3 |
striatum neuron | 4.52e-10 | 3 |
somatic stem cell | 5.44e-08 | 91 |
multi fate stem cell | 5.44e-08 | 91 |
stem cell | 2.03e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.48e-12 | 73 |
gray matter | 2.90e-12 | 34 |
nervous system | 5.69e-12 | 75 |
ventral horn of spinal cord | 2.41e-10 | 3 |
regional part of nervous system | 2.20e-09 | 54 |
ectoderm-derived structure | 3.42e-09 | 95 |
ectoderm | 3.42e-09 | 95 |
presumptive ectoderm | 3.42e-09 | 95 |
brain grey matter | 3.37e-08 | 29 |
regional part of telencephalon | 3.37e-08 | 29 |
telencephalon | 3.37e-08 | 29 |
basal ganglion | 3.77e-08 | 8 |
nuclear complex of neuraxis | 3.77e-08 | 8 |
aggregate regional part of brain | 3.77e-08 | 8 |
collection of basal ganglia | 3.77e-08 | 8 |
cerebral subcortex | 3.77e-08 | 8 |
neural tube | 9.17e-08 | 52 |
neural rod | 9.17e-08 | 52 |
future spinal cord | 9.17e-08 | 52 |
neural keel | 9.17e-08 | 52 |