FFCP PHASE1:Mm9::chr18:65553662..65553675,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225638 | |EntrezGene=225638 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=E9QL35,Q91ZB0 | |UniProt=E9QL35,Q91ZB0 | ||
|association_with_transcript=-120bp_to_ENSMUST00000035548,NM_001037294,uc008feu.2_5end | |association_with_transcript=-120bp_to_ENSMUST00000035548,NM_001037294,uc008feu.2_5end | ||
|cluster_id=chr18:65553662..65553675,- | |||
|description=CAGE_peak_2_at_Alpk2_5end | |description=CAGE_peak_2_at_Alpk2_5end | ||
|id=chr18:65553662..65553675,- | |id=chr18:65553662..65553675,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.14e-23!18;UBERON:0000948!5.14e-23!18;UBERON:0005498!5.14e-23!18;UBERON:0004140!5.14e-23!18;UBERON:0009881!5.14e-23!18;UBERON:0004141!5.14e-23!18;UBERON:0003084!5.14e-23!18;UBERON:0007005!5.14e-23!18;UBERON:0004139!5.14e-23!18;UBERON:0004291!5.14e-23!18;UBERON:0004535!3.72e-19!23;UBERON:0001009!3.72e-19!23;UBERON:0004872!5.70e-12!33;UBERON:0003103!1.39e-09!43;UBERON:0003914!3.04e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.05e-67,18;UBERON:0000948,1.05e-67,18;UBERON:0005498,1.05e-67,18;UBERON:0004140,1.05e-67,18;UBERON:0009881,1.05e-67,18;UBERON:0004141,1.05e-67,18;UBERON:0003084,1.05e-67,18;UBERON:0007005,1.05e-67,18;UBERON:0004139,1.05e-67,18;UBERON:0004291,1.05e-67,18;UBERON:0004535,1.16e-52,23;UBERON:0001009,1.16e-52,23;UBERON:0004872,3.14e-36,33;UBERON:0003103,3.03e-31,43;UBERON:0003914,6.06e-25,47;UBERON:0010314,1.18e-13,92;UBERON:0003081,1.20e-12,87;UBERON:0004111,8.09e-10,122;UBERON:0000025,3.42e-09,114;UBERON:0000926,1.24e-08,120;UBERON:0004120,1.24e-08,120;UBERON:0006603,1.24e-08,120;UBERON:0001048,1.62e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,10.1491628542396,8.67746421930056,9.54328925743379,10.4167683657493,10.8220327461072,10.181629450567,11.39416329277,10.4626626545851,12.1435956061856,7.24063339619314,8.86504306027114,7.78260571640215,7.74859933354261,8.34290438105992,6.1734952629771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0.83422552858047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,1.58711268530648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0,0.280924522409647,0,0,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.548783918618318,0,0.407412341537585,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,10.1491628542396,8.67746421930056,9.54328925743379,10.4167683657493,10.8220327461072,10.181629450567,11.39416329277,10.4626626545851,12.1435956061856,7.24063339619314,8.86504306027114,7.78260571640215,7.74859933354261,8.34290438105992,6.1734952629771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0.83422552858047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,1.58711268530648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0,0.280924522409647,0,0,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.548783918618318,0,0.407412341537585,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p2@Alpk2 | |short_description=p2@Alpk2 | ||
}} | }} |
Latest revision as of 15:26, 1 October 2015
Short description: | p2@Alpk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Alpk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -120bp_to_ENSMUST00000035548, NM_001037294, uc008feu.2_5end |
EntrezGene: | Alpk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.05e-67 | 18 |
heart | 1.05e-67 | 18 |
primitive heart tube | 1.05e-67 | 18 |
primary heart field | 1.05e-67 | 18 |
anterior lateral plate mesoderm | 1.05e-67 | 18 |
heart tube | 1.05e-67 | 18 |
heart primordium | 1.05e-67 | 18 |
cardiac mesoderm | 1.05e-67 | 18 |
cardiogenic plate | 1.05e-67 | 18 |
heart rudiment | 1.05e-67 | 18 |
cardiovascular system | 1.16e-52 | 23 |
circulatory system | 1.16e-52 | 23 |
splanchnic layer of lateral plate mesoderm | 3.14e-36 | 33 |
compound organ | 3.03e-31 | 43 |
epithelial tube | 6.06e-25 | 47 |
structure with developmental contribution from neural crest | 1.18e-13 | 92 |
lateral plate mesoderm | 1.20e-12 | 87 |
anatomical conduit | 8.09e-10 | 122 |
tube | 3.42e-09 | 114 |
mesoderm | 1.24e-08 | 120 |
mesoderm-derived structure | 1.24e-08 | 120 |
presumptive mesoderm | 1.24e-08 | 120 |
primordium | 1.62e-07 | 134 |