FFCP PHASE1:Mm9::chr6:63205871..63205880,+: Difference between revisions
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{{FFCP|EntrezGene=14804|HGNC=|MCL_coexpression_id=42|UniProt=|association_with_transcript=1bp_to_ENSMUST00000159319_5end|description=CAGE_peak_12_at_Grid2_5end|id=chr6:63205871..63205880,+|ontology_enrichment_celltype=CL:0000540!1.51e-08!33;CL:0000047!1.51e-08!33;CL:0000031!1.51e-08!33;CL:0000404!1.51e-08!33;CL:0000393!8.59e-07!39;CL:0000211!8.59e-07!39|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!2.25e-14!12;UBERON:0003057!2.25e-14!12;UBERON:0001017!3.67e-12!73;UBERON:0005743!3.67e-12!73;UBERON:0000073!1.12e-11!75;UBERON:0001016!1.12e-11!75;UBERON:0001049!4.38e-10!52;UBERON:0005068!4.38e-10!52;UBERON:0006241!4.38e-10!52;UBERON:0007135!4.38e-10!52;UBERON:0002240!1.65e-09!6;UBERON:0005174!1.65e-09!6;UBERON:0001137!1.65e-09!6;UBERON:0004121!1.77e-09!102;UBERON:0000924!1.77e-09!102;UBERON:0006601!1.77e-09!102;UBERON:0002346!7.54e-09!71;UBERON:0003075!7.54e-09!71;UBERON:0007284!7.54e-09!71;UBERON:0001948!1.80e-07!5;UBERON:0002315!1.80e-07!5;UBERON:0000033!5.70e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.54e-44,4;UBERON:0002680,4.54e-44,4;UBERON:0001895,4.54e-44,4;UBERON:0010092,4.54e-44,4;UBERON:0006215,4.54e-44,4;UBERON:0004733,6.66e-30,6;UBERON:0004732,6.66e-30,6;UBERON:0002028,6.66e-30,6;UBERON:0007277,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0.153606533256243,0.395658863190582,0.182975287204819,0,0.837548997004143,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09893115816166,12.7762491156208,0,0,0,0,0.599162557619291,0,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p12@Grid2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14804 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENSMUST00000159319_5end | |||
|cluster_id=chr6:63205871..63205880,+ | |||
|description=CAGE_peak_12_at_Grid2_5end | |||
|id=chr6:63205871..63205880,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.51e-08!33;CL:0000047!1.51e-08!33;CL:0000031!1.51e-08!33;CL:0000404!1.51e-08!33;CL:0000393!8.59e-07!39;CL:0000211!8.59e-07!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!2.25e-14!12;UBERON:0003057!2.25e-14!12;UBERON:0001017!3.67e-12!73;UBERON:0005743!3.67e-12!73;UBERON:0000073!1.12e-11!75;UBERON:0001016!1.12e-11!75;UBERON:0001049!4.38e-10!52;UBERON:0005068!4.38e-10!52;UBERON:0006241!4.38e-10!52;UBERON:0007135!4.38e-10!52;UBERON:0002240!1.65e-09!6;UBERON:0005174!1.65e-09!6;UBERON:0001137!1.65e-09!6;UBERON:0004121!1.77e-09!102;UBERON:0000924!1.77e-09!102;UBERON:0006601!1.77e-09!102;UBERON:0002346!7.54e-09!71;UBERON:0003075!7.54e-09!71;UBERON:0007284!7.54e-09!71;UBERON:0001948!1.80e-07!5;UBERON:0002315!1.80e-07!5;UBERON:0000033!5.70e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.54e-44,4;UBERON:0002680,4.54e-44,4;UBERON:0001895,4.54e-44,4;UBERON:0010092,4.54e-44,4;UBERON:0006215,4.54e-44,4;UBERON:0004733,6.66e-30,6;UBERON:0004732,6.66e-30,6;UBERON:0002028,6.66e-30,6;UBERON:0007277,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0.153606533256243,0.395658863190582,0.182975287204819,0,0.837548997004143,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09893115816166,12.7762491156208,0,0,0,0,0.599162557619291,0,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p12@Grid2 | |||
}} |
Latest revision as of 15:13, 1 October 2015
Short description: | p12@Grid2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Grid2_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 1bp_to_ENSMUST00000159319_5end |
EntrezGene: | Grid2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.54e-44 | 4 |
regional part of metencephalon | 4.54e-44 | 4 |
metencephalon | 4.54e-44 | 4 |
future metencephalon | 4.54e-44 | 4 |
rhombic lip | 4.54e-44 | 4 |
segmental subdivision of hindbrain | 6.66e-30 | 6 |
segmental subdivision of nervous system | 6.66e-30 | 6 |
hindbrain | 6.66e-30 | 6 |
presumptive hindbrain | 6.66e-30 | 6 |
posterior neural tube | 1.13e-15 | 12 |
chordal neural plate | 1.13e-15 | 12 |