FFCP PHASE1:Mm9::chr18:6516065..6516081,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:6516065..6516081,-
|short_description=p2@Epc1
|description=CAGE_peak_2_at_Epc1_5end
|association_with_transcript=3bp_to_NM_007935,uc008dzj.1_5end
|Entrez...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13831 | |EntrezGene=13831 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8C9X6 | |UniProt=Q8C9X6 | ||
|association_with_transcript=3bp_to_NM_007935,uc008dzj.1_5end | |||
|cluster_id=chr18:6516065..6516081,- | |||
|description=CAGE_peak_2_at_Epc1_5end | |||
|id=chr18:6516065..6516081,- | |||
|ontology_enrichment_celltype=CL:0000540!3.97e-11!33;CL:0000047!3.97e-11!33;CL:0000031!3.97e-11!33;CL:0000404!3.97e-11!33;CL:0000117!7.65e-09!23;CL:0000337!7.65e-09!23;CL:0000393!5.02e-07!39;CL:0000211!5.02e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.97e-11,33;CL:0000047,3.97e-11,33;CL:0000031,3.97e-11,33;CL:0000404,3.97e-11,33;CL:0000117,7.65e-09,23;CL:0000337,7.65e-09,23;CL:0000393,5.02e-07,39;CL:0000211,5.02e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-09!73;UBERON:0005743!1.27e-09!73;UBERON:0000033!3.81e-09!63;UBERON:0000073!5.46e-09!75;UBERON:0001016!5.46e-09!75;UBERON:0002346!6.34e-09!71;UBERON:0003075!6.34e-09!71;UBERON:0007284!6.34e-09!71;UBERON:0004121!7.10e-09!102;UBERON:0000924!7.10e-09!102;UBERON:0006601!7.10e-09!102;UBERON:0003056!7.41e-09!49;UBERON:0002020!7.74e-09!34;UBERON:0000153!9.50e-09!94;UBERON:0007811!4.79e-08!86;UBERON:0001049!2.64e-07!52;UBERON:0005068!2.64e-07!52;UBERON:0006241!2.64e-07!52;UBERON:0007135!2.64e-07!52;UBERON:0002791!3.84e-07!29;UBERON:0003528!3.84e-07!29;UBERON:0001893!3.84e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.44e-11,64;UBERON:0003075,1.44e-11,64;UBERON:0007284,1.44e-11,64;UBERON:0004121,6.37e-11,95;UBERON:0000924,6.37e-11,95;UBERON:0006601,6.37e-11,95;UBERON:0010371,4.53e-10,73;UBERON:0001017,1.27e-09,73;UBERON:0001016,5.46e-09,75;UBERON:0003056,7.41e-09,49;UBERON:0002020,7.74e-09,34;UBERON:0010314,3.03e-08,92;UBERON:0000073,2.03e-07,54;UBERON:0001049,2.64e-07,52;UBERON:0005068,2.64e-07,52;UBERON:0006241,2.64e-07,52;UBERON:0007135,2.64e-07,52;UBERON:0003528,3.84e-07,29;UBERON:0002791,3.84e-07,29;UBERON:0001893,3.84e-07,29 | |||
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| ||
|short_description=p2@Epc1 | |||
}} | }} |
Latest revision as of 15:11, 1 October 2015
Short description: | p2@Epc1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Epc1_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_NM_007935, uc008dzj.1_5end |
EntrezGene: | Epc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.97e-11 | 33 |
neuronal stem cell | 3.97e-11 | 33 |
neuroblast | 3.97e-11 | 33 |
electrically signaling cell | 3.97e-11 | 33 |
CNS neuron (sensu Vertebrata) | 7.65e-09 | 23 |
neuroblast (sensu Vertebrata) | 7.65e-09 | 23 |
electrically responsive cell | 5.02e-07 | 39 |
electrically active cell | 5.02e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.44e-11 | 64 |
neural plate | 1.44e-11 | 64 |
presumptive neural plate | 1.44e-11 | 64 |
ectoderm-derived structure | 6.37e-11 | 95 |
ectoderm | 6.37e-11 | 95 |
presumptive ectoderm | 6.37e-11 | 95 |
ecto-epithelium | 4.53e-10 | 73 |
central nervous system | 1.27e-09 | 73 |
nervous system | 5.46e-09 | 75 |
pre-chordal neural plate | 7.41e-09 | 49 |
gray matter | 7.74e-09 | 34 |
structure with developmental contribution from neural crest | 3.03e-08 | 92 |
regional part of nervous system | 2.03e-07 | 54 |
neural tube | 2.64e-07 | 52 |
neural rod | 2.64e-07 | 52 |
future spinal cord | 2.64e-07 | 52 |
neural keel | 2.64e-07 | 52 |
brain grey matter | 3.84e-07 | 29 |
regional part of telencephalon | 3.84e-07 | 29 |
telencephalon | 3.84e-07 | 29 |