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FFCP PHASE1:Mm9::chr6:57775049..57775135,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=232023
|EntrezGene=232023
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q8R1C3
|UniProt=Q8R1C3
|association_with_transcript=0bp_to_ENSMUST00000127485,NM_146168,uc009cco.1,uc009ccp.1_5end
|association_with_transcript=0bp_to_ENSMUST00000127485,NM_146168,uc009cco.1,uc009ccp.1_5end
|cluster_id=chr6:57775049..57775135,-
|description=CAGE_peak_1_at_Vopp1_5end
|description=CAGE_peak_1_at_Vopp1_5end
|id=chr6:57775049..57775135,-
|id=chr6:57775049..57775135,-
|ontology_enrichment_celltype=CL:0000393!5.72e-12!39;CL:0000211!5.72e-12!39;CL:0000117!2.13e-11!23;CL:0000337!2.13e-11!23;CL:0000540!8.56e-11!33;CL:0000047!8.56e-11!33;CL:0000031!8.56e-11!33;CL:0000404!8.56e-11!33;CL:0000055!7.80e-10!50;CL:0002319!3.48e-09!43;CL:0000221!3.53e-09!44;CL:0000133!3.53e-09!44
|ontology_enrichment_celltype_v019_2=CL:0000393,5.72e-12,39;CL:0000211,5.72e-12,39;CL:0000117,2.13e-11,23;CL:0000337,2.13e-11,23;CL:0000540,8.56e-11,33;CL:0000047,8.56e-11,33;CL:0000031,8.56e-11,33;CL:0000404,8.56e-11,33;CL:0002319,3.48e-09,43;CL:0000221,3.53e-09,44;CL:0000133,3.53e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.18e-19!63;UBERON:0003056!3.72e-19!49;UBERON:0001017!1.92e-18!73;UBERON:0005743!1.92e-18!73;UBERON:0002020!1.20e-17!34;UBERON:0000073!2.31e-17!75;UBERON:0001016!2.31e-17!75;UBERON:0004121!1.12e-15!102;UBERON:0000924!1.12e-15!102;UBERON:0006601!1.12e-15!102;UBERON:0002791!1.58e-15!29;UBERON:0003528!1.58e-15!29;UBERON:0001893!1.58e-15!29;UBERON:0001049!2.48e-15!52;UBERON:0005068!2.48e-15!52;UBERON:0006241!2.48e-15!52;UBERON:0007135!2.48e-15!52;UBERON:0003080!2.76e-15!40;UBERON:0000955!3.74e-15!50;UBERON:0006238!3.74e-15!50;UBERON:0002780!4.96e-15!39;UBERON:0001890!4.96e-15!39;UBERON:0006240!4.96e-15!39;UBERON:0002616!9.90e-15!49;UBERON:0002346!2.01e-14!71;UBERON:0003075!2.01e-14!71;UBERON:0007284!2.01e-14!71;UBERON:0000956!2.41e-12!21;UBERON:0001869!2.41e-12!21;UBERON:0000203!2.41e-12!21;UBERON:0000153!9.30e-11!94;UBERON:0007811!1.45e-10!86;UBERON:0002619!3.04e-10!17;UBERON:0002021!4.62e-08!10;UBERON:0000411!4.62e-08!10;UBERON:0001950!4.62e-08!10;UBERON:0004111!1.16e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.23e-19,95;UBERON:0000924,1.23e-19,95;UBERON:0006601,1.23e-19,95;UBERON:0002346,3.05e-19,64;UBERON:0003075,3.05e-19,64;UBERON:0007284,3.05e-19,64;UBERON:0003056,3.72e-19,49;UBERON:0001017,1.92e-18,73;UBERON:0002020,1.20e-17,34;UBERON:0001016,2.31e-17,75;UBERON:0010371,4.92e-17,73;UBERON:0000073,6.46e-17,54;UBERON:0003528,1.58e-15,29;UBERON:0002791,1.58e-15,29;UBERON:0001893,1.58e-15,29;UBERON:0001049,2.48e-15,52;UBERON:0005068,2.48e-15,52;UBERON:0006241,2.48e-15,52;UBERON:0007135,2.48e-15,52;UBERON:0003080,2.76e-15,40;UBERON:0002780,4.96e-15,39;UBERON:0001890,4.96e-15,39;UBERON:0006240,4.96e-15,39;UBERON:0000955,5.03e-14,47;UBERON:0006238,5.03e-14,47;UBERON:0002616,1.31e-13,46;UBERON:0000956,2.41e-12,21;UBERON:0001869,2.41e-12,21;UBERON:0000203,2.41e-12,21;UBERON:0010314,1.76e-10,92;UBERON:0002619,3.04e-10,17;UBERON:0002021,4.62e-08,10;UBERON:0000411,4.62e-08,10;UBERON:0001950,4.62e-08,10;UBERON:0004111,1.16e-07,122
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4566024,24.6252177073707,28.8541848499967,24.8933322670642,24.2755823492677,22.8123537801927,26.699106082371,10.1099679167598,36.6590194721286,1.12738587736838,17.7924689792335,13.0712207461107,16.9172533859321,16.5324574051496,14.6991829176977,13.6134396829075,17.1869787994014,12.5831213310853,3.8653459332161,2.59227005632079,18.9606672376907,18.6507198066951,23.1099653620861,20.3975692075138,12.7108953923912,16.8879151564075,16.2263856851958,15.8027794076798,10.1976114447629,13.41239797128,13.6115349934735,16.7627554872374,12.5075394132428,12.8564592399726,31.7422537061296,4.43971906748129,1.70456327558004,4.02923079273788,30.7171454511183,32.0937033021521,31.3189277497023,31.2977833455436,100.314420807073,198.22789675859,184.130094602871,185.045250840925,204.505286988988,143.867329151835,141.258658811874,143.104770049143,117.984155244746,122.801592834719,139.27752386124,23.1445785112714,33.9171142390876,37.2199260544012,30.631446350605,29.7650690931735,23.1642820647018,27.1141007917971,26.7845574410562,26.9572136057125,28.3020877175453,27.6292436880361,27.9166985251393,24.9086409869887,26.0582370287818,23.4336713338902,29.0539151682675,27.1169322710962,21.605832691935,22.2526386433786,28.5565905060731,29.1438864527603,25.9114676992633,19.313331385733,32.5575973256416,27.5740484616919,26.2305284464197,26.3416280936793,27.0961802780978,22.0002664430296,33.6685362994643,28.8283094041743,24.9216340410176,19.6430900721451,26.3392630016142,27.0069255373598,30.4768905084294,24.5628188867679,23.6358159453128,20.6591398634351,26.2503788752223,24.3461227401443
|phase1_expression=20.178754735204,12.2141392673776,18.654968814971,17.5429242557961,20.0358291978539,22.831580980017,17.2873354040689,26.21203465864,15.627548158835,16.3845168425395,15.4096171402954,12.6837732802585,22.5984963509192,21.5054189950734,96.9349406883579,91.5188208602013,160.199670091346,8.99067171270977,9.1866670515845,18.2487550273153,15.3928355173436,0.0992909512008853,0.522399578277871,13.1193786690593,19.7291981717766,30.4342940980961,21.1073378117947,23.7018355954478,31.1638407908453,24.1948924569534,23.281703618807,15.2407361630311,14.7615549020297,0,7.79899373328441,7.97926297720763,6.32925004413344,12.1374172913703,14.0640362014284,5.23523743973798,12.9410927366823,9.56263678941824,7.76816564849846,42.301330839794,47.9512884668304,35.4245231672045,24.2541316747892,25.2909181401318,26.3623419281366,36.9416808241138,34.2966732982138,23.0004102983955,6.04017381807851,28.2891235384424,31.5928171193916,25.7259436035947,24.0688089548556,39.7067511053631,116.534281455128,128.544807963104,133.738426139804,28.4629406938071,32.014612660001,23.3973926493164,17.7995945262055,26.2877642530057,24.8668091730276,14.9845139075406,69.0572817974461,82.3536223823313,88.1261588062291,39.4198358477249,35.1180980113066,78.8840746944304,57.7948190239965,92.8410974476121,42.9451935897616,40.7322608491749,37.1727810480109,132.018174017924,104.295913706747,109.39180781692,31.2684958881547,31.5147061617741,33.004421519791,51.2653738724182,47.1250263445031,112.958064170132,19.3859054932951,12.5448789777264,34.4938741554997,12.9063581547208,7.47968467078526,3.77792234146472,1.94932925234301,4.03224198387602,21.0666630197628,24.8828270963964,29.3558185201242,28.2671659608272,26.0560326586859,21.815501160434,35.6727335589304,28.4426681261332,48.0610111044895,45.0980560545676,46.5082489413601,14.7297204837587,19.4203412735379,12.4691396814453,15.26670875542,14.9188084372949,13.8369298353635,12.5099791658677,13.4051126134703,9.04799457573663,5.19109432242185,16.33972733195,72.5380652598897,23.7797269422691,48.1434510243658,43.1538975290348,27.9587641827183,20.4946557908083,19.0596503200244,16.860165643767,21.4469072865597,20.9965955847693,16.2649890653523,33.5531032266803,51.6975681185048,53.0261365916288,95.2557274653675,95.893296498874,41.1420328227929,39.7491094516006,22.2009813193689,33.8386960059453,19.7123751578266,79.3365796692007,30.8385449821608,41.3823787980251,36.7326744802912,33.0043551060216,48.7141333923507,65.3379973452734,80.5834831213668,126.764651662118,32.1196309469935,35.55194307155,27.8002776179039,26.9610750885917,22.799874436499,18.805616992197,24.0765099597294,19.1072896145753,9.83098462238529,13.1247432628505,12.7873574728017,20.2983257084792,23.6871320580907,18.9065164534066,19.8865577891577,16.7249596985293,18.2035193207106,17.9051137457814,18.5108646965737,11.9100649214513,18.1015834904828,16.4167464079095,17.7540692905424,18.8597983778679,23.2723122208514,18.2520729514106,39.1139304329277,51.1435923525044,5.28670052774077,13.7514294665043,29.0072020727918,27.1716906076713,18.1703120464152,12.5043785266472,12.4531704553127,8.56015317506516,10.4396393539793,13.1759163779209,12.3154252312132,8.75408476981064,13.4525220112193,10.7858329038507,10.8069024937347,12.3467589417708,25.0361629258068,25.2489212867501,14.6520056375005,18.3286195060783,19.0073437424273,19.5678937493989,14.0385112415851,9.44704947069454,8.94892748695836,7.28043267138623,4.74324203339438,31.3668798746257,34.3978241448105,40.2503181168888,52.3379113182338,57.6413411808276,42.0132655439343,34.5235364940973,28.6979351391813,18.1210532704134,21.5652309791032,16.0020607497456,5.92871578917665,9.09283960609602,7.3552939543984,5.30687873499704,25.1264338626582,28.8026945891137,23.7928865605358,19.0114496068211,19.2446003596572,15.2430694272052,11.9021820443007,14.2447562936193,27.270879930371,21.7035395855799,21.0480294627883,21.1383675983302,22.4490476425664,21.5527097286452,24.1266054302836,14.6854534631052,60.9787698543605,46.6333101254998,25.5275438080589,20.3948334670434,21.9672826804745,11.3611917241968,31.2353137222094,19.9123759591286,30.8055458757902,31.5438813297369,26.5130422158049,22.6461224631066,25.5030742055183,32.4404002281556,34.7853244592941,46.591590881162,16.3231097989509,20.2994788180671,22.4784003907935,32.4991142255895,9.2921596837974,14.0812768969889,13.302236506449,11.5049098651098,11.2214719294694,15.9866276930842,12.6629863652428,8.36127577798263,8.55593708123331,7.9009189483954,10.5418608574999,4.12542172992747,48.3424240170379,35.6520966181994,30.7873667402956,23.148399783412,26.9557155136256,22.4744710178609,22.5432158224906,15.8321773539592,11.7335854031855,12.2862601101016,167.601582521771,20.1161228588606,24.2196640043858,13.8719727334758,11.4597450243011,10.5050175836839,12.2421951384537,19.4696567111035,68.1774814383432,16.9237231729842,26.6680119412385,113.021074202815,86.1173634642459,95.4004982271199,25.4967644990783,27.010630298466,25.5669951538184,25.7761066864081,31.6335993581135,25.0082944566024,24.6252177073707,28.8541848499967,24.8933322670642,24.2755823492677,22.8123537801927,26.699106082371,10.1099679167598,36.6590194721286,1.12738587736838,17.7924689792335,13.0712207461107,16.9172533859321,16.5324574051496,14.6991829176977,13.6134396829075,17.1869787994014,12.5831213310853,3.8653459332161,2.59227005632079,18.9606672376907,18.6507198066951,23.1099653620861,20.3975692075138,12.7108953923912,16.8879151564075,16.2263856851958,15.8027794076798,10.1976114447629,13.41239797128,13.6115349934735,16.7627554872374,12.5075394132428,12.8564592399726,31.7422537061296,4.43971906748129,1.70456327558004,4.02923079273788,30.7171454511183,32.0937033021521,31.3189277497023,31.2977833455436,100.314420807073,198.22789675859,184.130094602871,185.045250840925,204.505286988988,143.867329151835,141.258658811874,143.104770049143,117.984155244746,122.801592834719,139.27752386124,23.1445785112714,33.9171142390876,37.2199260544012,30.631446350605,29.7650690931735,23.1642820647018,27.1141007917971,26.7845574410562,26.9572136057125,28.3020877175453,27.6292436880361,27.9166985251393,24.9086409869887,26.0582370287818,23.4336713338902,29.0539151682675,27.1169322710962,21.605832691935,22.2526386433786,28.5565905060731,29.1438864527603,25.9114676992633,19.313331385733,32.5575973256416,27.5740484616919,26.2305284464197,26.3416280936793,27.0961802780978,22.0002664430296,33.6685362994643,28.8283094041743,24.9216340410176,19.6430900721451,26.3392630016142,27.0069255373598,30.4768905084294,24.5628188867679,23.6358159453128,20.6591398634351,26.2503788752223,24.3461227401443
|short_description=p1@Vopp1
|short_description=p1@Vopp1
}}
}}

Latest revision as of 14:47, 1 October 2015

Short description:p1@Vopp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vopp1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000127485, NM_146168, uc009cco.1, uc009ccp.1_5end
EntrezGene:Vopp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vopp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I317.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I420.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.29
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E615.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F112.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E821.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A196.93
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A391.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5160.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.73
GP2+ M cell, pool1.CNhs13228.11845-124H930.43
GP2+ M cell, pool2.CNhs13231.11846-124I121.11
GP2+ M cell, pool3.CNhs13240.11847-124I223.70
Ileum epithelium, pool1.CNhs13199.10252-104B931.16
Ileum epithelium, pool2.CNhs13232.10253-104C124.19
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C823.28
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D842.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D947.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B335.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B724.25
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.29
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B826.36
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C336.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C434.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C423.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.04
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I928.29
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.59
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E124.07
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C539.71
Mouse Granule cells, donor1.CNhs12131.11713-123C3116.53
Mouse Granule cells, donor2.CNhs12357.11731-123E3128.54
Mouse Granule cells, donor3.CNhs12108.11636-122C7133.74
Mouse Meningeal cells, donor1.CNhs12132.11716-123C628.46
Mouse Meningeal cells, donor3.CNhs12109.11639-122D132.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C723.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D226.29
Mouse Microglia, donor1.CNhs12629.11718-123C824.87
Mouse Microglia, donor2.CNhs12634.11736-123E814.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D569.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F582.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D988.13
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F139.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D535.12
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D278.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F257.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D692.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D737.17
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4132.02
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4104.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8109.39
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E431.27
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D651.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F647.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1112.96
Mouse Schwann, donor1.CNhs12507.11728-123D919.39
Mouse Schwann, donor2.CNhs12573.11746-123F912.54
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G334.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E329.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I828.27
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G626.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G148.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G245.10
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G346.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.73
accessory axillary lymph node, adult.CNhs10475.1063-29H919.42
adrenal gland, adult.CNhs10508.49-24D712.47
adrenal gland, embryo E14.CNhs11038.406-44C515.27
adrenal gland, embryo E16.CNhs11004.1254-43D614.92
adrenal gland, embryo E17.CNhs11043.1263-45I113.84
adrenal gland, embryo E18.CNhs11026.1262-18F512.51
adrenal gland, neonate N00.CNhs11191.1311-23C113.41
adrenal gland, neonate N25.CNhs11223.1377-27I39.05
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H116.34
bone (os femoris), adult.CNhs10483.56-12G272.54
bone (os femoris), neonate N02.CNhs11227.1985-43F523.78
bone (os femoris), neonate N16.CNhs11225.1525-43A648.14
bone (os femoris), neonate N20.CNhs11195.1350-25C343.15
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B220.49
cerebellum, neonate N30.CNhs11135.1395-42I219.06
colon, adult.CNhs10468.36-18H716.86
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.45
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.26
corpora quadrigemina, adult.CNhs10501.16-22A433.55
corpus striatum, adult.CNhs10487.19-21D851.70
corpus striatum, neonate N00.CNhs11226.630-43F153.03
cortex, adult.CNhs10473.12-14D595.26
cortex, neonate N30.CNhs11107.1392-42F295.89
diencephalon, adult.CNhs10482.20-12F241.14
diencephalon, neonate N30.CNhs11201.1388-42B239.75
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.84
epididymis, adult.CNhs10490.58-23B219.71
eyeball, adult.CNhs10484.31-12G479.34
eyeball, embryo E12.CNhs11016.345-16C630.84
eyeball, embryo E14.CNhs10521.399-16E241.38
eyeball, embryo E15.CNhs10593.426-16C936.73
eyeball, embryo E17.CNhs11023.1261-18D433.00
eyeball, neonate N00.CNhs11207.633-15C648.71
eyeball, neonate N01.CNhs11140.1532-43E765.34
eyeball, neonate N02.CNhs11205.1551-44G880.58
eyeball, neonate N16.CNhs11188.777-19A2126.76
forelimb, embryo E11.CNhs10596.335-25E232.12
forelimb, embryo E12.CNhs10600.359-14H235.55
forelimb, embryo E13.CNhs10589.384-1E227.80
forelimb, embryo E14.CNhs10577.413-26A826.96
forelimb, embryo E15.CNhs11007.437-20E722.80
forelimb, embryo E17.CNhs10598.1517-43C418.81
forelimb, embryo E18.CNhs11008.1520-43B524.08
gonad, embryo E13.CNhs11044.1564-45I619.11
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.79
heart, embryo E11.CNhs10586.331-24E920.30
heart, embryo E12.CNhs11015.353-12F523.69
heart, embryo E13.CNhs11013.376-3I918.91
heart, embryo E14.CNhs10597.403-26D419.89
heart, embryo E15.CNhs11017.431-16C816.72
heart, embryo E16.CNhs11021.457-17C618.20
heart, embryo E17.CNhs11025.479-18E517.91
heart, embryo E18.CNhs11030.1283-20G318.51
heart, neonate N00.CNhs11213.639-21E311.91
heart, neonate N03.CNhs11221.1349-25I218.10
heart, neonate N10.CNhs11118.749-24G116.42
heart, neonate N16.CNhs11209.782-15G117.75
heart, neonate N20.CNhs11127.821-26I618.86
heart, neonate N25.CNhs11196.1351-25D323.27
heart, neonate N30.CNhs11202.1390-42D218.25
hippocampus, adult.CNhs10478.13-16E839.11
hippocampus, neonate N00.CNhs11228.627-43G151.14
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A313.75
intestine, embryo E12.CNhs11019.1251-16I529.01
intestine, embryo E13.CNhs11010.381-16D527.17
intestine, embryo E15.CNhs10602.976-16D818.17
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D312.45
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E913.18
intestine, neonate N06.CNhs11102.688-20B812.32
intestine, neonate N07.CNhs11095.720-20F28.75
intestine, neonate N10.CNhs11098.755-23A513.45
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E310.81
intestine, neonate N30.CNhs11131.1384-42G112.35
kidney, embryo E14.CNhs10606.411-4I925.04
kidney, embryo E15.CNhs10997.434-16F825.25
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I218.33
kidney, embryo E18.CNhs11001.1288-20C719.01
kidney, neonate N00.CNhs11214.646-21G719.57
kidney, neonate N10.CNhs11206.758-6D514.04
kidney, neonate N20.CNhs11113.832-19I19.45
kidney, neonate N25.CNhs11122.1353-25F38.95
kidney, neonate N30.CNhs11203.1385-42H17.28
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F831.37
liver, embryo E13.CNhs10524.378-3H634.40
liver, embryo E14.CNhs10594.409-16E140.25
liver, embryo E15.CNhs10520.433-16D752.34
liver, embryo E16.CNhs10523.462-17F557.64
liver, embryo E17.CNhs10510.481-18A342.01
liver, embryo E18.CNhs10579.499-43G434.52
liver, neonate N00.CNhs11117.641-24F428.70
liver, neonate N03.CNhs11123.1345-25G218.12
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A39.09
liver, neonate N25.CNhs11198.1368-26H17.36
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B125.13
lung, embryo E12.CNhs10522.354-16G228.80
lung, embryo E14.CNhs10604.404-26F823.79
lung, embryo E15.CNhs11020.432-17C519.01
lung, embryo E16.CNhs10998.458-17B619.24
lung, embryo E17.CNhs10605.480-44A615.24
lung, embryo E18.CNhs10583.1287-20I611.90
lung, neonate N00.CNhs11224.640-42C614.24
lung, neonate N06.CNhs11212.683-20E527.27
lung, neonate N07.CNhs11111.715-19A321.70
lung, neonate N10.CNhs11219.750-23E621.05
lung, neonate N20.CNhs11109.822-18A421.14
lung, neonate N25.CNhs11119.1359-25C722.45
lung, neonate N30.CNhs11133.1394-42H221.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.69
mammary gland, adult lactating day02.CNhs10480.595-22B660.98
mammary gland, adult pregnant day19.CNhs10476.588-5H246.63
medulla oblongata, adult.CNhs10477.17-12C225.53
medulla oblongata, neonate N30.CNhs11200.1396-42A320.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C721.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.36
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E131.24
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.91
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E330.81
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D731.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.51
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.65
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D532.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D634.79
olfactory brain, adult.CNhs10489.18-22I946.59
ovary, adult.CNhs10507.91-2I716.32
ovary, embryo E18.CNhs11040.505-44H720.30
ovary, neonate N00.CNhs11217.1299-22I422.48
oviduct, adult pregnant day01.CNhs10500.988-6G632.50
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F414.08
pancreas, embryo E15.CNhs11042.1556-45F213.30
pancreas, embryo E16.CNhs11003.460-26E511.50
pancreas, embryo E17.CNhs10599.1558-45G311.22
pancreas, embryo E18.CNhs10580.1535-43I715.99
pancreas, neonate N00.CNhs11105.645-26G912.66
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G848.34
pituitary gland, embryo E12.CNhs11018.346-16E635.65
pituitary gland, embryo E13.CNhs11009.370-44C730.79
pituitary gland, embryo E14.CNhs11037.398-44A523.15
pituitary gland, embryo E15.CNhs10592.427-16B926.96
pituitary gland, embryo E16.CNhs11036.449-43F622.47
pituitary gland, embryo E17.CNhs11039.1265-44F522.54
pituitary gland, neonate N00.CNhs11190.1308-22E915.83
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G312.29
prostate, adult.CNhs10470.859-1F8167.60
skin, adult.CNhs10492.30-1C320.12
skin, neonate N00.CNhs11124.650-25G424.22
skin, neonate N03.CNhs11215.662-22H313.87
skin, neonate N06.CNhs11097.693-20I511.46
skin, neonate N10.CNhs11108.762-6C410.51
small intestine, neonate N16.CNhs11114.790-21I112.24
spinal cord, adult.CNhs10505.24-13C919.47
spleen, adult.CNhs10465.25-2G268.18
spleen, embryo E16.CNhs11035.461-43C116.92
spleen, embryo E18.CNhs11011.1271-21F226.67
spleen, neonate N10.CNhs11116.752-24D1113.02
spleen, neonate N20.CNhs11112.824-19H186.12
spleen, neonate N25.CNhs11099.1354-25G395.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C625.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.57
stomach, adult.CNhs10503.33-1H625.78
stomach, embryo E12.CNhs10588.356-43E331.63
stomach, embryo E15.CNhs10603.1252-16G825.01
stomach, embryo E16.CNhs11022.459-17D424.63
stomach, embryo E17.CNhs11006.1035-18D528.85
stomach, embryo E18.CNhs10999.1286-20C624.89
stomach, neonate N03.CNhs11193.1340-24B824.28
stomach, neonate N07.CNhs11210.718-18A922.81
stomach, neonate N25.CNhs11104.1355-25E426.70
stomach, neonate N30.CNhs11134.1386-42I110.11
submandibular gland, adult.CNhs10469.59-29C136.66
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F517.79
testis, embryo E15.CNhs11034.443-27C513.07
testis, embryo E16.CNhs11033.470-26G516.92
testis, embryo E17.CNhs11029.486-18I516.53
testis, embryo E18.CNhs11027.503-18G514.70
testis, neonate N00.CNhs11189.1300-22B713.61
testis, neonate N07.CNhs11222.726-26I417.19
testis, neonate N10.CNhs11204.763-44D912.58
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B518.96
thymus, embryo E14.CNhs11041.402-44I418.65
thymus, embryo E15.CNhs11005.430-45I223.11
thymus, embryo E16.CNhs11002.456-26C520.40
thymus, embryo E17.CNhs10581.478-18C112.71
thymus, embryo E18.CNhs10595.1273-19G416.89
thymus, neonate N02.CNhs11181.1541-43F816.23
thymus, neonate N03.CNhs11137.2104-43C715.80
thymus, neonate N06.CNhs11197.681-26C410.20
thymus, neonate N07.CNhs11211.713-19D313.41
thymus, neonate N10.CNhs11194.748-24E413.61
thymus, neonate N20.CNhs11186.820-7A216.76
thymus, neonate N25.CNhs11125.1362-25G712.51
thymus, neonate N30.CNhs11132.1393-42G212.86
tongue, adult.CNhs10499.32-1B431.74
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E430.72
uterus, adult pregnant day19.CNhs10497.590-15F532.09
uterus, adult.CNhs10509.92-27E531.32
vagina, adult.CNhs10502.89-27D531.30
vesicular gland, adult.CNhs10491.51-27F8100.31
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1198.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2184.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3185.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7204.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4143.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5141.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6143.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7117.98
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8122.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9139.28
whole body, embryo E11.CNhs11014.324-5I823.14
whole body, embryo E12.CNhs10587.857-27C933.92
whole body, embryo E13.CNhs10512.372-23H237.22
whole body, embryo E14.5.CNhs10578.420-27D230.63
whole body, embryo E14.CNhs10519.395-14B129.77
whole body, embryo E16.CNhs10514.453-14F223.16
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G526.78
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G526.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G528.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G527.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.91
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G526.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G528.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G529.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G525.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.31
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.57
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G526.34
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G533.67
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.92
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.34
whole body, embryo E17.5.CNhs10513.490-9F927.01
whole body, embryo E17.CNhs10517.475-3I530.48
whole body, embryo E18.CNhs10516.493-3B324.56
whole body, neonate N00.CNhs10525.657-19C223.64
whole body, neonate N01.CNhs10576.659-23C620.66
whole body, neonate N06.CNhs10515.692-21D126.25
whole body, neonate N10.CNhs10518.761-6B424.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell5.72e-1239
electrically active cell5.72e-1239
CNS neuron (sensu Vertebrata)2.13e-1123
neuroblast (sensu Vertebrata)2.13e-1123
neuron8.56e-1133
neuronal stem cell8.56e-1133
neuroblast8.56e-1133
electrically signaling cell8.56e-1133
neural cell3.48e-0943
ectodermal cell3.53e-0944
neurectodermal cell3.53e-0944

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.23e-1995
ectoderm1.23e-1995
presumptive ectoderm1.23e-1995
neurectoderm3.05e-1964
neural plate3.05e-1964
presumptive neural plate3.05e-1964
pre-chordal neural plate3.72e-1949
central nervous system1.92e-1873
gray matter1.20e-1734
nervous system2.31e-1775
ecto-epithelium4.92e-1773
regional part of nervous system6.46e-1754
brain grey matter1.58e-1529
regional part of telencephalon1.58e-1529
telencephalon1.58e-1529
neural tube2.48e-1552
neural rod2.48e-1552
future spinal cord2.48e-1552
neural keel2.48e-1552
anterior neural tube2.76e-1540
regional part of forebrain4.96e-1539
forebrain4.96e-1539
future forebrain4.96e-1539
brain5.03e-1447
future brain5.03e-1447
regional part of brain1.31e-1346
cerebral cortex2.41e-1221
cerebral hemisphere2.41e-1221
pallium2.41e-1221
structure with developmental contribution from neural crest1.76e-1092
regional part of cerebral cortex3.04e-1017
occipital lobe4.62e-0810
visual cortex4.62e-0810
neocortex4.62e-0810
anatomical conduit1.16e-07122
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