FFCP PHASE1:Mm9::chr11:4999629..4999649,+: Difference between revisions
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{{FFCP|EntrezGene=279766|HGNC=|MCL_coexpression_id=0|UniProt=Q5SUT9|association_with_transcript=18bp_to_ENSMUST00000139742_5end|description=CAGE_peak_5_at_Rhbdd3_5end|id=chr11:4999629..4999649,+|ontology_enrichment_celltype=CL:0000055!4.63e-09!50;CL:0002319!1.39e-08!43;CL:0000221!1.52e-08!44;CL:0000133!1.52e-08!44;CL:0000540!1.89e-08!33;CL:0000047!1.89e-08!33;CL:0000031!1.89e-08!33;CL:0000404!1.89e-08!33;CL:0000393!2.88e-08!39;CL:0000211!2.88e-08!39;CL:0000117!3.39e-07!23;CL:0000337!3.39e-07!23|ontology_enrichment_celltype_v019_2=CL:0002613,5.88e-08,3;CL:0000117,9.79e-08,23;CL:0000337,9.79e-08,23;CL:0002319,7.97e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.13e-12!73;UBERON:0005743!3.13e-12!73;UBERON:0000073!2.46e-11!75;UBERON:0001016!2.46e-11!75;UBERON:0000955!1.78e-08!50;UBERON:0006238!1.78e-08!50;UBERON:0004121!2.72e-08!102;UBERON:0000924!2.72e-08!102;UBERON:0006601!2.72e-08!102;UBERON:0002346!3.62e-08!71;UBERON:0003075!3.62e-08!71;UBERON:0007284!3.62e-08!71;UBERON:0002616!3.79e-08!49;UBERON:0001049!1.73e-07!52;UBERON:0005068!1.73e-07!52;UBERON:0006241!1.73e-07!52;UBERON:0007135!1.73e-07!52;UBERON:0000025!7.53e-07!114;UBERON:0000033!9.84e-07!63|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,1.56478268869608,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.606949382578793,0,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,1.53687322128622,0.414758449233911,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,1.83843757322004,1.10115880999389,0.638436690425939,0.307213066512487,1.18697658957174,0.731901148819277,2.08365348222704,0.837548997004143,1.12552522006336,0.30559649555362,0,0.284743361598206,0.931997229126503,0,0,0,0.860423876981386,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,2.54805239706646,0,0,0.253359865475099,0,0.68510327831436,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0.260240885925407,0.459804208866946,0,0,0.272145996605311,0.12811372028485,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0.702213187313235,0,0,0.207125772535502,0.234526059981096,1.08037236876609,0.23674473558521,0,0.308534225774757,0,1.07309360559848,0.233530684734339,0.822799249567402,0.164167464079095,0.162137619091711,0.292399974850665,0,0.268412837520744,0.210289948564127,0.205809224758569,0,0,0,0.696710015581316,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0,0,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0.167506257441816,0.714130922658041,0.780534591431195,0,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0.955875191810208,0.445597348164788,0.283076530788832,0,0,0.790575555893047,0.321321316421807,0.141940085208269,0,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,16.9107881605257,0,0.496375471371293,1.16670713006429,0.774958940866387,0.506868376472335,0.234714477291508,0.781226309063701,0.209718688851422,10.6297013163443,10.9451402377989,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.887943813496259,0,0,0,0,0,0,0.501572104035363,1.12950368523413,0,0.572895513439397,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0.682934423016537,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p5@Rhbdd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=279766 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SUT9 | |||
|association_with_transcript=18bp_to_ENSMUST00000139742_5end | |||
|cluster_id=chr11:4999629..4999649,+ | |||
|description=CAGE_peak_5_at_Rhbdd3_5end | |||
|id=chr11:4999629..4999649,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.63e-09!50;CL:0002319!1.39e-08!43;CL:0000221!1.52e-08!44;CL:0000133!1.52e-08!44;CL:0000540!1.89e-08!33;CL:0000047!1.89e-08!33;CL:0000031!1.89e-08!33;CL:0000404!1.89e-08!33;CL:0000393!2.88e-08!39;CL:0000211!2.88e-08!39;CL:0000117!3.39e-07!23;CL:0000337!3.39e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,5.88e-08,3;CL:0000117,9.79e-08,23;CL:0000337,9.79e-08,23;CL:0002319,7.97e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.13e-12!73;UBERON:0005743!3.13e-12!73;UBERON:0000073!2.46e-11!75;UBERON:0001016!2.46e-11!75;UBERON:0000955!1.78e-08!50;UBERON:0006238!1.78e-08!50;UBERON:0004121!2.72e-08!102;UBERON:0000924!2.72e-08!102;UBERON:0006601!2.72e-08!102;UBERON:0002346!3.62e-08!71;UBERON:0003075!3.62e-08!71;UBERON:0007284!3.62e-08!71;UBERON:0002616!3.79e-08!49;UBERON:0001049!1.73e-07!52;UBERON:0005068!1.73e-07!52;UBERON:0006241!1.73e-07!52;UBERON:0007135!1.73e-07!52;UBERON:0000025!7.53e-07!114;UBERON:0000033!9.84e-07!63 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,1.56478268869608,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.606949382578793,0,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,1.53687322128622,0.414758449233911,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,1.83843757322004,1.10115880999389,0.638436690425939,0.307213066512487,1.18697658957174,0.731901148819277,2.08365348222704,0.837548997004143,1.12552522006336,0.30559649555362,0,0.284743361598206,0.931997229126503,0,0,0,0.860423876981386,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,2.54805239706646,0,0,0.253359865475099,0,0.68510327831436,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0.260240885925407,0.459804208866946,0,0,0.272145996605311,0.12811372028485,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0.702213187313235,0,0,0.207125772535502,0.234526059981096,1.08037236876609,0.23674473558521,0,0.308534225774757,0,1.07309360559848,0.233530684734339,0.822799249567402,0.164167464079095,0.162137619091711,0.292399974850665,0,0.268412837520744,0.210289948564127,0.205809224758569,0,0,0,0.696710015581316,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0,0,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0.167506257441816,0.714130922658041,0.780534591431195,0,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0.955875191810208,0.445597348164788,0.283076530788832,0,0,0.790575555893047,0.321321316421807,0.141940085208269,0,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,16.9107881605257,0,0.496375471371293,1.16670713006429,0.774958940866387,0.506868376472335,0.234714477291508,0.781226309063701,0.209718688851422,10.6297013163443,10.9451402377989,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.887943813496259,0,0,0,0,0,0,0.501572104035363,1.12950368523413,0,0.572895513439397,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0.682934423016537,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Rhbdd3 | |||
}} |
Latest revision as of 14:47, 1 October 2015
Short description: | p5@Rhbdd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rhbdd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 18bp_to_ENSMUST00000139742_5end |
EntrezGene: | Rhbdd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 5.88e-08 | 3 |
CNS neuron (sensu Vertebrata) | 9.79e-08 | 23 |
neuroblast (sensu Vertebrata) | 9.79e-08 | 23 |
neural cell | 7.97e-07 | 43 |