Personal tools

FFCP PHASE1:Mm9::chr11:49838878..49838887,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr11:49838878..49838887,+ |short_description=p4@Rnf130 |description=CAGE_peak_4_at_Rnf130_5end |association_with_transcript=28bp_to_ENSMUST00000102776_5end |E...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:49838878..49838887,+
|DHSsupport=NA
|short_description=p4@Rnf130
|DPIdataset=NA
|description=CAGE_peak_4_at_Rnf130_5end
|association_with_transcript=28bp_to_ENSMUST00000102776_5end
|EntrezGene=59044
|EntrezGene=59044
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=Q8VEM1
|UniProt=Q8VEM1
|association_with_transcript=28bp_to_ENSMUST00000102776_5end
|cluster_id=chr11:49838878..49838887,+
|description=CAGE_peak_4_at_Rnf130_5end
|id=chr11:49838878..49838887,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0010371,9.17e-07,73
|phase1_expression=1.60148847104794,0,0.454999239389536,0.30246421130683,0,0.503637815735669,0.233612640595526,0.516493293766305,0,0,0.34243593645101,0.398860794976682,0.513602189793617,0.0874204024189974,1.33243904726265,0.607425802169478,0.699561878128147,2.20823515750766,2.87940310572051,0.84877930359606,2.38121212422995,4.56738375524072,4.4403964153619,0.319984845586813,0.22940928106717,0,0,0.215471232685889,1.33016393619462,0.252030129759931,0.665191531965914,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,15.9042019680025,11.720030167857,13.088093599345,25.2939539853336,17.7591826089196,21.8479658864019,1.38486499773135,2.53442328048786,0.550640256485045,0,0.218025156380447,1.97717564461025,0.777719596297134,0,0,2.18117387875057,0.725362142011344,0.336093799142464,0.257259436035947,0.85960031981627,0.515672092277442,1.61853168687678,0.528990979272033,0,0.338844532069132,0.889294796111139,2.2497492932035,2.96659908770092,2.1314403448383,1.19840044207362,1.15265491596466,1.34796496001021,1.35005938331691,1.05162480675691,3.42781181284564,1.10434270475807,1.46988959057945,1.91690942036473,0,2.20231761998777,3.70293280447044,2.76491759861238,1.45074916503213,1.9212405156506,2.6045668527838,2.51264699101243,2.25105044012672,3.20876320331301,2.35702868378934,0.569486723196412,1.4911955666024,1.51452386666368,0.831287161174641,4.34796733052517,6.88339101585109,0.679971333707751,0.539703191637817,1.94932925234301,2.24013443548668,2.94933282276679,0,0,0,2.95771181531029,0,0,0,0.432982082022428,0.253359865475099,2.02209778005913,2.2836775943812,2.07150306917737,1.63286352971307,0.173485326766136,0.304465478312141,2.07553947530453,0.452167921657868,0.587943535678524,1.88499886994513,9.88779870937496,0.86759614151947,3.5384422077995,1.61766849947409,1.54589062922275,1.45462575940567,1.86391761218122,3.51336956413857,5.86450779077674,0.510914110417183,2.03685711660064,4.79922184794726,3.30382590389968,2.69623150928681,0.915001205637253,1.13088916901578,1.73824320192276,2.55715457330331,3.53239675751252,2.75810147215188,1.73126918545538,1.11966273549084,1.26361379216837,1.47309299120532,0.910843100738926,1.37941262660084,2.16074555766419,1.20563854268572,1.02054748726992,1.15302348256365,1.49922759295566,0.776110112217047,1.72454394346274,0.945530400839096,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,1.39323986772945,3.51106593656617,3.08817488537658,5.11494298912067,0,0,0.36012412292203,0.23674473558521,1.57411385397923,1.07986979021165,0.465067889500816,0.804820204198858,0.700592054203017,0.493679549740441,1.14917224855367,1.37816976227955,0.877199924551994,1.09775057645525,1.74468344388483,2.52347938276953,1.44066457330998,0.991256348951394,0,0.639864751605702,0.696710015581316,0.644337306610467,0.403367049246685,0.889512175379481,0.570676878337677,0.474529061544512,0.823494773620054,1.00534083520108,1.39269530428806,0.38992817423824,0,0.648414149624083,1.39398891278057,0.379335801906163,0.799739588268102,0,1.01825663922657,1.74557238450863,1.61312385747733,1.70738650235495,2.80459281161244,1.72698600625512,2.34454611451421,2.37162101669719,0.166845105716094,0.393117990226406,0.899448449539415,0.202860121388503,1.20588579876208,1.52775511068852,1.43848068725405,1.45921704097532,0.823684239564244,0,1.86070473834252,0.936113019343682,2.27320990152401,1.07638448113147,3.37710464954357,1.10851914099963,0,0.814824882210129,0.339490171550376,0.704070744865506,1.00503754465089,1.19021820443007,1.36593553500459,1.41871629695572,1.7717175171902,1.2756381492599,1.80249646187312,2.41758974612254,1.88043776155965,3.01582567878545,1.08781136763742,1.47529281905711,1.65562047782839,3.69266356971921,3.7507739709505,0.163934945376675,1.76729649043061,1.89304931649754,1.56175497718655,1.29254038639679,0.955875191810208,1.33679204449436,1.41538265394416,0.404810701674894,0.292255857911312,0.790575555893047,0.963963949265421,2.41298144854057,0.712262414669021,1.79175655288934,2.14461159864296,0,1.21390318077491,1.209294227859,1.13163047853539,1.77181135728464,0.922305443831782,0.775284879504663,1.45413491791002,1.78248689192361,0,3.16255825724996,2.06271086496374,1.36175842301515,1.62054984628179,0.905510786479282,1.28602221018955,1.24138163549592,1.24858172321449,1.15184314421485,0.304464949114599,1.17335854031855,1.0591603543191,0.661585194164886,1.48397627647332,1.45317984026315,1.08563264870681,1.3130957840345,0.164140899745061,0.874442509889552,3.8939313422207,1.70870880797853,1.44470807574256,1.48155621895769,0.753473828018764,0.683471138605126,0,3.90950388985867,3.77868921273877,4.97519905695926,1.90934123603023,1.58167996790568,0,0.540026704109006,0.627264888043406,0,0.944050424693745,1.65306911450672,3.66458318777641,1.8146096260851,3.72803587852155,0.56369293868419,1.19613236835183,0.827292452285488,0.583353565032143,2.19571699912143,1.01373675294467,1.40828686374905,1.43224823328345,1.78260885523708,1.20792060413003,1.15212002503146,0,0.810900861160657,0.616265742988964,0.129920822977795,0,0.39736270956253,0.480781798079875,0.147689527174577,0.201932899896295,0.457240839929999,0.100826185136841,0.877120926657772,0.962118416403295,0.467507608726276,0.453460767230423,0.221985953374065,0.179427713218951,0,1.15913756419314,2.064507229963,3.47988086107804,1.71494703263253,0,2.82375921308533,0.460325236507177,1.71868654031819,1.3748254587495,2.05524755931193,3.0215755895588,1.35004500046361,2.2516060161211,0,3.62432218226274,0,0.798049746802062,1.53660245178721,0.243106717068294,0,0.735374033800057,1.11123363900808,0.206035057238894,0.64183841918363,1.26348605881899,0.25347929989024,0.565879024158229,1.49826411951812,0.832326981263301,0.746661096422973,2.38146845641537,0.463537303779422,1.15745532278223,2.06042950401653,0.883193520806384,1.37147700954166,0.887379030796687,0.953744759789284,1.0174249164263,1.2234219453993,0.930760686808441,0.914639864363863,0.526139422875686,0.950628796921032,2.80571135828869,1.42362021749009,1.28055827088233,0.818462086339379,1.39443157067369,0.385813221962283,1.74867404556562,0.701794825336225,0.429742108096597,0.57386499620653,1.54413993383661,1.15933917810211
|phase1_expression=1.60148847104794,0,0.454999239389536,0.30246421130683,0,0.503637815735669,0.233612640595526,0.516493293766305,0,0,0.34243593645101,0.398860794976682,0.513602189793617,0.0874204024189974,1.33243904726265,0.607425802169478,0.699561878128147,2.20823515750766,2.87940310572051,0.84877930359606,2.38121212422995,4.56738375524072,4.4403964153619,0.319984845586813,0.22940928106717,0,0,0.215471232685889,1.33016393619462,0.252030129759931,0.665191531965914,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,15.9042019680025,11.720030167857,13.088093599345,25.2939539853336,17.7591826089196,21.8479658864019,1.38486499773135,2.53442328048786,0.550640256485045,0,0.218025156380447,1.97717564461025,0.777719596297134,0,0,2.18117387875057,0.725362142011344,0.336093799142464,0.257259436035947,0.85960031981627,0.515672092277442,1.61853168687678,0.528990979272033,0,0.338844532069132,0.889294796111139,2.2497492932035,2.96659908770092,2.1314403448383,1.19840044207362,1.15265491596466,1.34796496001021,1.35005938331691,1.05162480675691,3.42781181284564,1.10434270475807,1.46988959057945,1.91690942036473,0,2.20231761998777,3.70293280447044,2.76491759861238,1.45074916503213,1.9212405156506,2.6045668527838,2.51264699101243,2.25105044012672,3.20876320331301,2.35702868378934,0.569486723196412,1.4911955666024,1.51452386666368,0.831287161174641,4.34796733052517,6.88339101585109,0.679971333707751,0.539703191637817,1.94932925234301,2.24013443548668,2.94933282276679,0,0,0,2.95771181531029,0,0,0,0.432982082022428,0.253359865475099,2.02209778005913,2.2836775943812,2.07150306917737,1.63286352971307,0.173485326766136,0.304465478312141,2.07553947530453,0.452167921657868,0.587943535678524,1.88499886994513,9.88779870937496,0.86759614151947,3.5384422077995,1.61766849947409,1.54589062922275,1.45462575940567,1.86391761218122,3.51336956413857,5.86450779077674,0.510914110417183,2.03685711660064,4.79922184794726,3.30382590389968,2.69623150928681,0.915001205637253,1.13088916901578,1.73824320192276,2.55715457330331,3.53239675751252,2.75810147215188,1.73126918545538,1.11966273549084,1.26361379216837,1.47309299120532,0.910843100738926,1.37941262660084,2.16074555766419,1.20563854268572,1.02054748726992,1.15302348256365,1.49922759295566,0.776110112217047,1.72454394346274,0.945530400839096,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,1.39323986772945,3.51106593656617,3.08817488537658,5.11494298912067,0,0,0.36012412292203,0.23674473558521,1.57411385397923,1.07986979021165,0.465067889500816,0.804820204198858,0.700592054203017,0.493679549740441,1.14917224855367,1.37816976227955,0.877199924551994,1.09775057645525,1.74468344388483,2.52347938276953,1.44066457330998,0.991256348951394,0,0.639864751605702,0.696710015581316,0.644337306610467,0.403367049246685,0.889512175379481,0.570676878337677,0.474529061544512,0.823494773620054,1.00534083520108,1.39269530428806,0.38992817423824,0,0.648414149624083,1.39398891278057,0.379335801906163,0.799739588268102,0,1.01825663922657,1.74557238450863,1.61312385747733,1.70738650235495,2.80459281161244,1.72698600625512,2.34454611451421,2.37162101669719,0.166845105716094,0.393117990226406,0.899448449539415,0.202860121388503,1.20588579876208,1.52775511068852,1.43848068725405,1.45921704097532,0.823684239564244,0,1.86070473834252,0.936113019343682,2.27320990152401,1.07638448113147,3.37710464954357,1.10851914099963,0,0.814824882210129,0.339490171550376,0.704070744865506,1.00503754465089,1.19021820443007,1.36593553500459,1.41871629695572,1.7717175171902,1.2756381492599,1.80249646187312,2.41758974612254,1.88043776155965,3.01582567878545,1.08781136763742,1.47529281905711,1.65562047782839,3.69266356971921,3.7507739709505,0.163934945376675,1.76729649043061,1.89304931649754,1.56175497718655,1.29254038639679,0.955875191810208,1.33679204449436,1.41538265394416,0.404810701674894,0.292255857911312,0.790575555893047,0.963963949265421,2.41298144854057,0.712262414669021,1.79175655288934,2.14461159864296,0,1.21390318077491,1.209294227859,1.13163047853539,1.77181135728464,0.922305443831782,0.775284879504663,1.45413491791002,1.78248689192361,0,3.16255825724996,2.06271086496374,1.36175842301515,1.62054984628179,0.905510786479282,1.28602221018955,1.24138163549592,1.24858172321449,1.15184314421485,0.304464949114599,1.17335854031855,1.0591603543191,0.661585194164886,1.48397627647332,1.45317984026315,1.08563264870681,1.3130957840345,0.164140899745061,0.874442509889552,3.8939313422207,1.70870880797853,1.44470807574256,1.48155621895769,0.753473828018764,0.683471138605126,0,3.90950388985867,3.77868921273877,4.97519905695926,1.90934123603023,1.58167996790568,0,0.540026704109006,0.627264888043406,0,0.944050424693745,1.65306911450672,3.66458318777641,1.8146096260851,3.72803587852155,0.56369293868419,1.19613236835183,0.827292452285488,0.583353565032143,2.19571699912143,1.01373675294467,1.40828686374905,1.43224823328345,1.78260885523708,1.20792060413003,1.15212002503146,0,0.810900861160657,0.616265742988964,0.129920822977795,0,0.39736270956253,0.480781798079875,0.147689527174577,0.201932899896295,0.457240839929999,0.100826185136841,0.877120926657772,0.962118416403295,0.467507608726276,0.453460767230423,0.221985953374065,0.179427713218951,0,1.15913756419314,2.064507229963,3.47988086107804,1.71494703263253,0,2.82375921308533,0.460325236507177,1.71868654031819,1.3748254587495,2.05524755931193,3.0215755895588,1.35004500046361,2.2516060161211,0,3.62432218226274,0,0.798049746802062,1.53660245178721,0.243106717068294,0,0.735374033800057,1.11123363900808,0.206035057238894,0.64183841918363,1.26348605881899,0.25347929989024,0.565879024158229,1.49826411951812,0.832326981263301,0.746661096422973,2.38146845641537,0.463537303779422,1.15745532278223,2.06042950401653,0.883193520806384,1.37147700954166,0.887379030796687,0.953744759789284,1.0174249164263,1.2234219453993,0.930760686808441,0.914639864363863,0.526139422875686,0.950628796921032,2.80571135828869,1.42362021749009,1.28055827088233,0.818462086339379,1.39443157067369,0.385813221962283,1.74867404556562,0.701794825336225,0.429742108096597,0.57386499620653,1.54413993383661,1.15933917810211
|short_description=p4@Rnf130
}}
}}

Latest revision as of 14:40, 1 October 2015

Short description:p4@Rnf130
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rnf130_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 28bp_to_ENSMUST00000102776_5end
EntrezGene:Rnf130
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rnf130

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G925.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H421.85
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A89.89
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.30
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.98
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium9.17e-0773
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:49838878..49838887,%2B&oldid=4307773"