Personal tools

FFCP PHASE1:Mm9::chr3:129604337..129604348,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:129604337..129604348,+
|DHSsupport=NA
|short_description=p3@Casp6
|DPIdataset=NA
|description=CAGE_peak_3_at_Casp6_5end
|association_with_transcript=0bp_to_ENSMUST00000029626,NM_009811,uc008riq.2_5end
|EntrezGene=12368
|EntrezGene=12368
|HGNC=
|HGNC=
|MCL_coexpression_id=52
|TSSclassifier=NA
|UniProt=O08738,Q3TPJ9
|UniProt=O08738,Q3TPJ9
|association_with_transcript=0bp_to_ENSMUST00000029626,NM_009811,uc008riq.2_5end
|cluster_id=chr3:129604337..129604348,+
|description=CAGE_peak_3_at_Casp6_5end
|id=chr3:129604337..129604348,+
|ontology_enrichment_celltype=CL:0000066!1.49e-07!25;CL:0002076!1.61e-07!15
|ontology_enrichment_celltype_v019_2=CL:0000066,3.47e-09,25;CL:0002076,6.66e-09,15;CL:0000223,4.52e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=2.08193501236232,1.74487703819681,1.36499771816861,0.90739263392049,2.00358291978539,0.839396359559449,1.16806320297763,0.516493293766305,0,0,0,0,0.171200729931206,0.437102012094987,0.333109761815663,0.202475267389826,0,0.788655413395594,0.548457734422955,0,0.765389611359628,0.992909512008853,0.783599367416806,1.43993180514066,0.68822784320151,0.57423196411502,1.29228598847722,1.07735616342945,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,2.3108129580102,1.66234645358492,0.816677425049476,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.125896817975577,0.912392380975631,0.917733760808408,0,0.436050312760893,1.09843091367236,0.58328969722285,1.67983705950435,0,0.503347818173209,1.45072428402269,0,1.28629718017973,2.29226751951005,2.06268836910977,0.606949382578793,0,0,1.0165335962074,0.889294796111139,1.3498495759221,1.97773272513395,1.4209602298922,0.299600110518405,0.768436610643109,1.65903379693564,1.21505344498522,0.841299845405528,0.571301968807607,0,0.857435594504678,1.15014565221884,0.919218786610021,0,0.127687338085188,0.153606533256243,0.131886287730194,0.731901148819277,0,0,0.56276261003168,0,0.294628585473668,1.28134512719193,0,1.21161909333094,2.41828992341714,0.289864488701678,0,0,2.15881276655127,0.649776417447669,0.896053774194671,0.280888840263504,1.53387290320252,2.07828803682295,1.7666978725517,3.09855523508697,2.56652954828636,5.09610479413291,14.2213340630666,1.29894624606728,1.52015919285059,1.51657333504435,0.5709193985953,0.258937883647172,1.1875371125186,1.21439728736295,0.608930956624282,0.922461989024234,0.904335843315735,0.470354828542819,1.13099932196708,0.494389935468748,0.289198713839823,0,0.485300549842228,0.883366073841574,0.484875253135222,0,0,0.209446706813455,0.766371165625774,0.479260498023681,0.599902730993408,0.889491589511453,0,0,0.251308704225729,0.347648640384553,0,0.20778804455956,0.162241263067758,0.407357455401265,0.373220911830279,0.252722758433675,1.05220927943237,0.390361328888111,0.689706313300419,0.900310649026746,1.05493372485001,0.612328492361951,0.2562274405697,0.843315521037559,0.258703370739016,2.15567992932842,0.945530400839096,1.05570674498369,1.31517439456545,0.556094498451196,1.0447564995665,0.61734640922383,1.19420560091096,0.702213187313235,0.257347907114715,0,0.621377317606506,0.703578179943289,0.36012412292203,0.23674473558521,0.983821158737019,0.925602677324269,1.16266972375204,1.60964040839772,1.05088808130453,0.493679549740441,1.47750717671186,0.486412857275134,0,0.658650345873152,0.536825675041487,0,0.514523061896422,0.991256348951394,0.264450566663544,0.426576501070468,1.16118335930219,0.644337306610467,1.00841762311671,0.889512175379481,0.380451252225118,0.949058123089023,0.494096864172033,0.502670417600539,1.59165177632921,0.58489226135736,0.898819408654221,1.29682829924817,1.1948476395262,0.189667900953082,1.71372768914593,1.1270773567308,0.814605311381257,0.581857461502877,0.98190147846446,0.885311519739602,0.738050739898011,0.31399745568275,0.616985819609003,1.1858105083486,0.333690211432188,0.393117990226406,0.674586337154561,0.405720242777006,0,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.372140947668503,0.936113019343682,1.51547326768267,0.179397413521912,0,1.10851914099963,2.65287976478679,0.814824882210129,0.848725428875941,1.17345124144251,0.670025029767263,0.714130922658041,0.585400943573396,0.945810864637146,0.8858587585951,1.43509291791738,0.81931657357869,0.863424909329478,1.44649058581512,1.50791283939272,2.71952841909355,1.47529281905711,0.551873492609465,0.160550589987792,0,0.819674726883377,0.252470927204373,1.57754109708128,0.780877488593277,1.29254038639679,0.716906393857656,1.11399337041197,1.13230612315533,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,1.70328102249922,1.06839362200353,1.62886959353576,0.494910368917606,0,0.485561272309963,0,0.754420319023592,0.590603785761546,0,0.258428293168221,0.727067458955011,0.712994756769443,0.948110273807448,1.05418608574999,0,0,0.720244376125241,0.517434735131018,1.71469628025274,0.886701168211368,1.78368817602071,0.493647061806363,0.913394847343798,0.938686832254841,0.42366414172764,0.882113592219848,0.49465875882444,0.484393280087717,0.482503399425247,0.835606408021955,0.328281799490123,1.45740418314925,0,0.170870880797853,1.03193433981611,0.370389054739423,0,0.136694227721025,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,1.26534397432454,0.813277868507395,1.51207477150522,0.627264888043406,0.436725127492355,0.539457385539283,0.247960367176008,0.785267825952089,0.777689839750757,2.4853572523477,0.56369293868419,1.19613236835183,0.827292452285488,1.16670713006429,1.16243841129958,1.68956125490778,0.58678619322877,0.911430693907651,0.524296722128554,0.724752362478018,0,0.316011120628178,1.41907650703115,0.513554785824136,0.77952493786677,0.358053391334963,0.596044064343795,0.841368146639782,0.295379054349154,0.403865799792591,0.685861259894999,1.00826185136841,0.584747284438515,0.962118416403295,0.935015217452552,0.680191150845634,0.443971906748129,0.448569283047378,0.335769232728157,0.579568782096571,0.187682475451182,0.549454872801795,1.2862102744744,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,1.14166082342594,1.99512436700516,1.19513524027894,0.243106717068294,1.25767897576789,0.551530525350042,0.222246727801615,0.412070114477788,0,0.252697211763798,1.01391719956096,0.754505365544305,0.468207537349412,0.832326981263301,0.861532034334199,1.42888107384922,0.347652977834566,0.964546102318525,0.824171801606613,0.883193520806384,0.685738504770831,0.887379030796687,0.953744759789284,0.436039249896986,0.658765662907314,1.01537529470012,0.365855945745545,0,0.679020569229309,0.561142271657738,0.237270036248348,0.492522411877817,0.409231043169689,1.23949472948773,0.578719832943424,0.249810577937946,1.16965804222704,0.429742108096597,0.956441660344217,0.441182838239031,0.231867835620421
|phase1_expression=2.08193501236232,1.74487703819681,1.36499771816861,0.90739263392049,2.00358291978539,0.839396359559449,1.16806320297763,0.516493293766305,0,0,0,0,0.171200729931206,0.437102012094987,0.333109761815663,0.202475267389826,0,0.788655413395594,0.548457734422955,0,0.765389611359628,0.992909512008853,0.783599367416806,1.43993180514066,0.68822784320151,0.57423196411502,1.29228598847722,1.07735616342945,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,2.3108129580102,1.66234645358492,0.816677425049476,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.125896817975577,0.912392380975631,0.917733760808408,0,0.436050312760893,1.09843091367236,0.58328969722285,1.67983705950435,0,0.503347818173209,1.45072428402269,0,1.28629718017973,2.29226751951005,2.06268836910977,0.606949382578793,0,0,1.0165335962074,0.889294796111139,1.3498495759221,1.97773272513395,1.4209602298922,0.299600110518405,0.768436610643109,1.65903379693564,1.21505344498522,0.841299845405528,0.571301968807607,0,0.857435594504678,1.15014565221884,0.919218786610021,0,0.127687338085188,0.153606533256243,0.131886287730194,0.731901148819277,0,0,0.56276261003168,0,0.294628585473668,1.28134512719193,0,1.21161909333094,2.41828992341714,0.289864488701678,0,0,2.15881276655127,0.649776417447669,0.896053774194671,0.280888840263504,1.53387290320252,2.07828803682295,1.7666978725517,3.09855523508697,2.56652954828636,5.09610479413291,14.2213340630666,1.29894624606728,1.52015919285059,1.51657333504435,0.5709193985953,0.258937883647172,1.1875371125186,1.21439728736295,0.608930956624282,0.922461989024234,0.904335843315735,0.470354828542819,1.13099932196708,0.494389935468748,0.289198713839823,0,0.485300549842228,0.883366073841574,0.484875253135222,0,0,0.209446706813455,0.766371165625774,0.479260498023681,0.599902730993408,0.889491589511453,0,0,0.251308704225729,0.347648640384553,0,0.20778804455956,0.162241263067758,0.407357455401265,0.373220911830279,0.252722758433675,1.05220927943237,0.390361328888111,0.689706313300419,0.900310649026746,1.05493372485001,0.612328492361951,0.2562274405697,0.843315521037559,0.258703370739016,2.15567992932842,0.945530400839096,1.05570674498369,1.31517439456545,0.556094498451196,1.0447564995665,0.61734640922383,1.19420560091096,0.702213187313235,0.257347907114715,0,0.621377317606506,0.703578179943289,0.36012412292203,0.23674473558521,0.983821158737019,0.925602677324269,1.16266972375204,1.60964040839772,1.05088808130453,0.493679549740441,1.47750717671186,0.486412857275134,0,0.658650345873152,0.536825675041487,0,0.514523061896422,0.991256348951394,0.264450566663544,0.426576501070468,1.16118335930219,0.644337306610467,1.00841762311671,0.889512175379481,0.380451252225118,0.949058123089023,0.494096864172033,0.502670417600539,1.59165177632921,0.58489226135736,0.898819408654221,1.29682829924817,1.1948476395262,0.189667900953082,1.71372768914593,1.1270773567308,0.814605311381257,0.581857461502877,0.98190147846446,0.885311519739602,0.738050739898011,0.31399745568275,0.616985819609003,1.1858105083486,0.333690211432188,0.393117990226406,0.674586337154561,0.405720242777006,0,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.372140947668503,0.936113019343682,1.51547326768267,0.179397413521912,0,1.10851914099963,2.65287976478679,0.814824882210129,0.848725428875941,1.17345124144251,0.670025029767263,0.714130922658041,0.585400943573396,0.945810864637146,0.8858587585951,1.43509291791738,0.81931657357869,0.863424909329478,1.44649058581512,1.50791283939272,2.71952841909355,1.47529281905711,0.551873492609465,0.160550589987792,0,0.819674726883377,0.252470927204373,1.57754109708128,0.780877488593277,1.29254038639679,0.716906393857656,1.11399337041197,1.13230612315533,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,1.70328102249922,1.06839362200353,1.62886959353576,0.494910368917606,0,0.485561272309963,0,0.754420319023592,0.590603785761546,0,0.258428293168221,0.727067458955011,0.712994756769443,0.948110273807448,1.05418608574999,0,0,0.720244376125241,0.517434735131018,1.71469628025274,0.886701168211368,1.78368817602071,0.493647061806363,0.913394847343798,0.938686832254841,0.42366414172764,0.882113592219848,0.49465875882444,0.484393280087717,0.482503399425247,0.835606408021955,0.328281799490123,1.45740418314925,0,0.170870880797853,1.03193433981611,0.370389054739423,0,0.136694227721025,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,1.26534397432454,0.813277868507395,1.51207477150522,0.627264888043406,0.436725127492355,0.539457385539283,0.247960367176008,0.785267825952089,0.777689839750757,2.4853572523477,0.56369293868419,1.19613236835183,0.827292452285488,1.16670713006429,1.16243841129958,1.68956125490778,0.58678619322877,0.911430693907651,0.524296722128554,0.724752362478018,0,0.316011120628178,1.41907650703115,0.513554785824136,0.77952493786677,0.358053391334963,0.596044064343795,0.841368146639782,0.295379054349154,0.403865799792591,0.685861259894999,1.00826185136841,0.584747284438515,0.962118416403295,0.935015217452552,0.680191150845634,0.443971906748129,0.448569283047378,0.335769232728157,0.579568782096571,0.187682475451182,0.549454872801795,1.2862102744744,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,1.14166082342594,1.99512436700516,1.19513524027894,0.243106717068294,1.25767897576789,0.551530525350042,0.222246727801615,0.412070114477788,0,0.252697211763798,1.01391719956096,0.754505365544305,0.468207537349412,0.832326981263301,0.861532034334199,1.42888107384922,0.347652977834566,0.964546102318525,0.824171801606613,0.883193520806384,0.685738504770831,0.887379030796687,0.953744759789284,0.436039249896986,0.658765662907314,1.01537529470012,0.365855945745545,0,0.679020569229309,0.561142271657738,0.237270036248348,0.492522411877817,0.409231043169689,1.23949472948773,0.578719832943424,0.249810577937946,1.16965804222704,0.429742108096597,0.956441660344217,0.441182838239031,0.231867835620421
|short_description=p3@Casp6
}}
}}

Latest revision as of 14:36, 1 October 2015

Short description:p3@Casp6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Casp6_5end
Coexpression cluster:MCL_coexpression_mm9:52
Association with transcript: 0bp_to_ENSMUST00000029626, NM_009811, uc008riq.2_5end
EntrezGene:Casp6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Casp6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F92.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell3.47e-0925
endo-epithelial cell6.66e-0915
endodermal cell4.52e-0720
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:129604337..129604348,%2B&oldid=4307634"