Personal tools

FFCP PHASE1:Mm9::chr5:107926737..107926778,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=231570
|EntrezGene=231570
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G3X9V7,Q80TK0,Q3TEG0
|UniProt=G3X9V7,Q80TK0,Q3TEG0
|association_with_transcript=0bp_to_ENSMUST00000112671,NM_001007574,uc008ymg.2,uc008ymh.2,uc008ymi.2_5end
|association_with_transcript=0bp_to_ENSMUST00000112671,NM_001007574,uc008ymg.2,uc008ymh.2,uc008ymi.2_5end
|cluster_id=chr5:107926737..107926778,+
|description=CAGE_peak_2_at_A830010M20Rik_5end
|description=CAGE_peak_2_at_A830010M20Rik_5end
|id=chr5:107926737..107926778,+
|id=chr5:107926737..107926778,+
|ontology_enrichment_celltype=CL:0000540!9.32e-13!33;CL:0000047!9.32e-13!33;CL:0000031!9.32e-13!33;CL:0000404!9.32e-13!33;CL:0000117!1.98e-10!23;CL:0000337!1.98e-10!23;CL:0002319!3.67e-09!43;CL:0000221!4.91e-09!44;CL:0000133!4.91e-09!44;CL:0000393!1.15e-08!39;CL:0000211!1.15e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000540,1.61e-15,33;CL:0000047,1.61e-15,33;CL:0000031,1.61e-15,33;CL:0000404,1.61e-15,33;CL:0000117,7.75e-13,23;CL:0000337,7.75e-13,23;CL:0000393,1.56e-11,39;CL:0000211,1.56e-11,39;CL:0002319,2.96e-10,43;CL:0000221,8.49e-10,44;CL:0000133,8.49e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.59e-27!73;UBERON:0005743!1.59e-27!73;UBERON:0000073!3.66e-27!75;UBERON:0001016!3.66e-27!75;UBERON:0002346!1.24e-26!71;UBERON:0003075!1.24e-26!71;UBERON:0007284!1.24e-26!71;UBERON:0004121!7.67e-24!102;UBERON:0000924!7.67e-24!102;UBERON:0006601!7.67e-24!102;UBERON:0001049!6.84e-23!52;UBERON:0005068!6.84e-23!52;UBERON:0006241!6.84e-23!52;UBERON:0007135!6.84e-23!52;UBERON:0000955!1.92e-22!50;UBERON:0006238!1.92e-22!50;UBERON:0002616!9.05e-22!49;UBERON:0000033!9.64e-21!63;UBERON:0003056!2.00e-19!49;UBERON:0003080!2.29e-18!40;UBERON:0007811!4.26e-18!86;UBERON:0002780!1.10e-17!39;UBERON:0001890!1.10e-17!39;UBERON:0006240!1.10e-17!39;UBERON:0002020!9.62e-17!34;UBERON:0002791!1.83e-14!29;UBERON:0003528!1.83e-14!29;UBERON:0001893!1.83e-14!29;UBERON:0000153!4.52e-14!94;UBERON:0000956!2.28e-10!21;UBERON:0001869!2.28e-10!21;UBERON:0000203!2.28e-10!21;UBERON:0002021!1.37e-08!10;UBERON:0000411!1.37e-08!10;UBERON:0001950!1.37e-08!10;UBERON:0002619!1.93e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-34,73;UBERON:0001016,6.66e-33,75;UBERON:0000073,7.36e-32,54;UBERON:0002346,2.52e-31,64;UBERON:0003075,2.52e-31,64;UBERON:0007284,2.52e-31,64;UBERON:0001049,5.67e-30,52;UBERON:0005068,5.67e-30,52;UBERON:0006241,5.67e-30,52;UBERON:0007135,5.67e-30,52;UBERON:0000955,1.11e-26,47;UBERON:0006238,1.11e-26,47;UBERON:0004121,3.88e-26,95;UBERON:0000924,3.88e-26,95;UBERON:0006601,3.88e-26,95;UBERON:0002616,8.67e-26,46;UBERON:0010371,7.79e-25,73;UBERON:0003080,4.25e-24,40;UBERON:0002780,3.59e-23,39;UBERON:0001890,3.59e-23,39;UBERON:0006240,3.59e-23,39;UBERON:0002020,3.98e-23,34;UBERON:0003056,6.02e-23,49;UBERON:0003528,5.21e-20,29;UBERON:0002791,5.21e-20,29;UBERON:0001893,5.21e-20,29;UBERON:0010314,1.16e-19,92;UBERON:0000956,2.11e-14,21;UBERON:0001869,2.11e-14,21;UBERON:0000203,2.11e-14,21;UBERON:0002619,9.12e-12,17;UBERON:0002021,3.93e-11,10;UBERON:0000411,3.93e-11,10;UBERON:0001950,3.93e-11,10;UBERON:0002420,8.65e-07,8;UBERON:0007245,8.65e-07,8;UBERON:0010009,8.65e-07,8;UBERON:0010011,8.65e-07,8;UBERON:0000454,8.65e-07,8
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0.262261207256992,0.333109761815663,0.607425802169478,0,1.10411757875383,1.09691546884591,1.27316895539409,8.50432901510698,0.992909512008853,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0,0,0.139986421625363,1.43752564364972,0.838913030288682,0.725362142011344,0.336093799142464,0,0,0,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0.384218305321555,5.39185984004084,2.70011876663381,2.52389953621658,3.14216082844184,1.98781686856452,3.67472397644862,1.72521847832825,4.5960939330501,13.2139057199266,22.6006588410782,23.5017995882053,2.50583946687368,2.10421580285542,5.2091337055676,5.30447698102624,18.5711661310454,16.3494125121187,8.83885756421003,13.5253096759148,2.98239113320481,0.530083353332288,0.226714680320357,0,0,0,0,0,0,2.10666630197628,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0.258937883647172,1.63286352971307,0,2.43572382649713,2.30615497256059,2.41156224884196,1.29347577849275,0.628332956648377,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,29.8636412951778,25.761944938055,0.255457055208591,0.239630249011841,0,0.127070227073065,29.0593840445356,35.6850470198529,13.8219787324151,44.8466746096073,43.2159122888259,24.3112012134685,26.6075671431123,0,0.497627882440372,0,2.31486041475121,0.130120442962704,0.459804208866946,1.26043490863744,0.753524089178575,0.816437989815934,2.69038812598185,1.96773621575431,10.6068382002996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.697841513081,17.6995933292369,0.330418782983798,0,0.213288250535234,0.232236671860439,0.902072229254653,0.605050573870028,0,0.380451252225118,1.42358718463353,0.988193728344065,0.502670417600539,0.397912944082302,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0,21.3532284683763,18.0505997351993,0,0,3.78609863299508,3.90438744296638,4.52389135238878,0.955875191810208,1.11399337041197,2.26461224631066,4.04810701674894,2.92255857911312,3.55759000151871,21.8498495166829,0,0,0,0.164970122972535,0,0.971122544619926,0.302323556964751,0.943025398779491,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,20.0859367394735,1.44048875225048,0.129358683782755,0.857348140126369,1.95074257006501,3.21063871683727,5.43011767986999,3.34911444026059,0,0,0.661585194164886,0,0.161464426695906,0,0,0.164140899745061,0,13.1651964427462,0.341741761595705,0,0,0.188368457004691,0.410082683163076,0.915112692826091,0.169978429993855,0.559805809294632,0.414599921413271,0,0.632671987162271,0.813277868507395,0.648032044930808,0.418176592028937,0.655087691238533,0.809186078308924,0.661227645802687,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0,0.308132871494482,0.51968329191118,1.07416017400489,0.596044064343795,1.80293174279953,1.47689527174577,2.3222283488074,1.82896335972,2.72230699869469,1.94915761479505,2.88635524920988,2.92192255453922,0,0,0,0,0.386379188064381,0.750729901804728,0,0,0,42.35638819628,50.6357760157895,50.4148051826669,38.3232596626423,34.2541259885321,41.5466643564335,40.5013500139084,45.4824415256463,62.5336524398202,48.1517089929193,0.93408612825759,1.59609949360412,1.53660245178721,1.45864030240976,3.5634237646757,2.38996560985018,1.33348036680969,2.06035057238894,1.92551525755089,2.77966932940177,2.28131369901216,3.2066478035633,1.96647165686753,2.62503124859964,2.35485422718014,1.42888107384922,2.31768651889711,1.73618298417335,1.64834360321323,2.79677948255355,2.05721551431249,2.12970967391205,2.14592570952589,1.30811774969096,1.31753132581463,2.28459441307527,1.64635175585495,3.6829759601298,3.39510284614654,1.12228454331548,2.01679530811096,2.06859412988683,1.22769312950907,2.01417893541756,1.35034627686799,2.99772693525535,0.935726433781634,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0.262261207256992,0.333109761815663,0.607425802169478,0,1.10411757875383,1.09691546884591,1.27316895539409,8.50432901510698,0.992909512008853,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0,0,0.139986421625363,1.43752564364972,0.838913030288682,0.725362142011344,0.336093799142464,0,0,0,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0.384218305321555,5.39185984004084,2.70011876663381,2.52389953621658,3.14216082844184,1.98781686856452,3.67472397644862,1.72521847832825,4.5960939330501,13.2139057199266,22.6006588410782,23.5017995882053,2.50583946687368,2.10421580285542,5.2091337055676,5.30447698102624,18.5711661310454,16.3494125121187,8.83885756421003,13.5253096759148,2.98239113320481,0.530083353332288,0.226714680320357,0,0,0,0,0,0,2.10666630197628,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0.258937883647172,1.63286352971307,0,2.43572382649713,2.30615497256059,2.41156224884196,1.29347577849275,0.628332956648377,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,29.8636412951778,25.761944938055,0.255457055208591,0.239630249011841,0,0.127070227073065,29.0593840445356,35.6850470198529,13.8219787324151,44.8466746096073,43.2159122888259,24.3112012134685,26.6075671431123,0,0.497627882440372,0,2.31486041475121,0.130120442962704,0.459804208866946,1.26043490863744,0.753524089178575,0.816437989815934,2.69038812598185,1.96773621575431,10.6068382002996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.697841513081,17.6995933292369,0.330418782983798,0,0.213288250535234,0.232236671860439,0.902072229254653,0.605050573870028,0,0.380451252225118,1.42358718463353,0.988193728344065,0.502670417600539,0.397912944082302,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0,21.3532284683763,18.0505997351993,0,0,3.78609863299508,3.90438744296638,4.52389135238878,0.955875191810208,1.11399337041197,2.26461224631066,4.04810701674894,2.92255857911312,3.55759000151871,21.8498495166829,0,0,0,0.164970122972535,0,0.971122544619926,0.302323556964751,0.943025398779491,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,20.0859367394735,1.44048875225048,0.129358683782755,0.857348140126369,1.95074257006501,3.21063871683727,5.43011767986999,3.34911444026059,0,0,0.661585194164886,0,0.161464426695906,0,0,0.164140899745061,0,13.1651964427462,0.341741761595705,0,0,0.188368457004691,0.410082683163076,0.915112692826091,0.169978429993855,0.559805809294632,0.414599921413271,0,0.632671987162271,0.813277868507395,0.648032044930808,0.418176592028937,0.655087691238533,0.809186078308924,0.661227645802687,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0,0.308132871494482,0.51968329191118,1.07416017400489,0.596044064343795,1.80293174279953,1.47689527174577,2.3222283488074,1.82896335972,2.72230699869469,1.94915761479505,2.88635524920988,2.92192255453922,0,0,0,0,0.386379188064381,0.750729901804728,0,0,0,42.35638819628,50.6357760157895,50.4148051826669,38.3232596626423,34.2541259885321,41.5466643564335,40.5013500139084,45.4824415256463,62.5336524398202,48.1517089929193,0.93408612825759,1.59609949360412,1.53660245178721,1.45864030240976,3.5634237646757,2.38996560985018,1.33348036680969,2.06035057238894,1.92551525755089,2.77966932940177,2.28131369901216,3.2066478035633,1.96647165686753,2.62503124859964,2.35485422718014,1.42888107384922,2.31768651889711,1.73618298417335,1.64834360321323,2.79677948255355,2.05721551431249,2.12970967391205,2.14592570952589,1.30811774969096,1.31753132581463,2.28459441307527,1.64635175585495,3.6829759601298,3.39510284614654,1.12228454331548,2.01679530811096,2.06859412988683,1.22769312950907,2.01417893541756,1.35034627686799,2.99772693525535,0.935726433781634,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p2@A830010M20Rik
|short_description=p2@A830010M20Rik
}}
}}

Latest revision as of 14:04, 1 October 2015

Short description:p2@A830010M20Rik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_A830010M20Rik_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000112671, NM_001007574, uc008ymg.2, uc008ymh.2, uc008ymi.2_5end
EntrezGene:A830010M20Rik
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@A830010M20Rik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B229.86
cerebellum, neonate N30.CNhs11135.1395-42I225.76
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A429.06
corpus striatum, adult.CNhs10487.19-21D835.69
corpus striatum, neonate N00.CNhs11226.630-43F113.82
cortex, adult.CNhs10473.12-14D544.85
cortex, neonate N30.CNhs11107.1392-42F243.22
diencephalon, adult.CNhs10482.20-12F224.31
diencephalon, neonate N30.CNhs11201.1388-42B226.61
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A210.61
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E834.70
hippocampus, neonate N00.CNhs11228.627-43G117.70
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C221.35
medulla oblongata, neonate N30.CNhs11200.1396-42A318.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I921.85
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G820.09
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.36
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A350.41
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.32
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A640.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A745.48
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A862.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A948.15
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.61e-1533
neuronal stem cell1.61e-1533
neuroblast1.61e-1533
electrically signaling cell1.61e-1533
CNS neuron (sensu Vertebrata)7.75e-1323
neuroblast (sensu Vertebrata)7.75e-1323
electrically responsive cell1.56e-1139
electrically active cell1.56e-1139
neural cell2.96e-1043
ectodermal cell8.49e-1044
neurectodermal cell8.49e-1044

Uber anatomy
Ontology termp-valuen
central nervous system1.85e-3473
nervous system6.66e-3375
regional part of nervous system7.36e-3254
neurectoderm2.52e-3164
neural plate2.52e-3164
presumptive neural plate2.52e-3164
neural tube5.67e-3052
neural rod5.67e-3052
future spinal cord5.67e-3052
neural keel5.67e-3052
brain1.11e-2647
future brain1.11e-2647
ectoderm-derived structure3.88e-2695
ectoderm3.88e-2695
presumptive ectoderm3.88e-2695
regional part of brain8.67e-2646
ecto-epithelium7.79e-2573
anterior neural tube4.25e-2440
regional part of forebrain3.59e-2339
forebrain3.59e-2339
future forebrain3.59e-2339
gray matter3.98e-2334
pre-chordal neural plate6.02e-2349
brain grey matter5.21e-2029
regional part of telencephalon5.21e-2029
telencephalon5.21e-2029
structure with developmental contribution from neural crest1.16e-1992
cerebral cortex2.11e-1421
cerebral hemisphere2.11e-1421
pallium2.11e-1421
regional part of cerebral cortex9.12e-1217
occipital lobe3.93e-1110
visual cortex3.93e-1110
neocortex3.93e-1110
basal ganglion8.65e-078
nuclear complex of neuraxis8.65e-078
aggregate regional part of brain8.65e-078
collection of basal ganglia8.65e-078
cerebral subcortex8.65e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:107926737..107926778,%2B&oldid=4306458"