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FFCP PHASE1:Mm9::chr6:54516277..54516290,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:54516277..54516290,-
|DHSsupport=NA
|short_description=p3@Scrn1
|DPIdataset=NA
|description=CAGE_peak_3_at_Scrn1_5end
|association_with_transcript=85bp_to_NM_027268,uc009bzw.1_5end
|EntrezGene=69938
|EntrezGene=69938
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9CZC8
|UniProt=Q9CZC8
|association_with_transcript=85bp_to_NM_027268,uc009bzw.1_5end
|cluster_id=chr6:54516277..54516290,-
|description=CAGE_peak_3_at_Scrn1_5end
|id=chr6:54516277..54516290,-
|ontology_enrichment_celltype=CL:0000221!3.73e-20!44;CL:0000133!3.73e-20!44;CL:0002319!1.88e-19!43;CL:0000055!2.63e-16!50;CL:0000540!3.10e-16!33;CL:0000047!3.10e-16!33;CL:0000031!3.10e-16!33;CL:0000404!3.10e-16!33;CL:0000117!4.56e-14!23;CL:0000337!4.56e-14!23;CL:0000393!7.80e-14!39;CL:0000211!7.80e-14!39
|ontology_enrichment_celltype_v019_2=CL:0000221,2.10e-24,44;CL:0000133,2.10e-24,44;CL:0002319,1.72e-23,43;CL:0000540,4.35e-20,33;CL:0000047,4.35e-20,33;CL:0000031,4.35e-20,33;CL:0000404,4.35e-20,33;CL:0000117,4.41e-18,23;CL:0000337,4.41e-18,23;CL:0000393,3.45e-16,39;CL:0000211,3.45e-16,39;CL:0002321,2.47e-10,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.95e-39!75;UBERON:0001016!7.95e-39!75;UBERON:0001017!4.79e-38!73;UBERON:0005743!4.79e-38!73;UBERON:0004121!5.91e-38!102;UBERON:0000924!5.91e-38!102;UBERON:0006601!5.91e-38!102;UBERON:0002346!5.22e-35!71;UBERON:0003075!5.22e-35!71;UBERON:0007284!5.22e-35!71;UBERON:0000033!2.42e-30!63;UBERON:0001049!2.00e-28!52;UBERON:0005068!2.00e-28!52;UBERON:0006241!2.00e-28!52;UBERON:0007135!2.00e-28!52;UBERON:0000955!3.97e-27!50;UBERON:0006238!3.97e-27!50;UBERON:0002616!1.99e-26!49;UBERON:0003056!5.52e-25!49;UBERON:0003080!5.25e-21!40;UBERON:0002020!2.65e-20!34;UBERON:0002780!3.18e-20!39;UBERON:0001890!3.18e-20!39;UBERON:0006240!3.18e-20!39;UBERON:0002791!4.57e-17!29;UBERON:0003528!4.57e-17!29;UBERON:0001893!4.57e-17!29;UBERON:0007811!3.42e-14!86;UBERON:0000153!5.09e-13!94;UBERON:0000956!3.62e-12!21;UBERON:0001869!3.62e-12!21;UBERON:0000203!3.62e-12!21;UBERON:0002619!3.81e-10!17;UBERON:0003076!7.65e-08!12;UBERON:0003057!7.65e-08!12;UBERON:0002021!3.01e-07!10;UBERON:0000411!3.01e-07!10;UBERON:0001950!3.01e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.79e-49,75;UBERON:0001017,7.34e-48,73;UBERON:0004121,3.27e-47,95;UBERON:0000924,3.27e-47,95;UBERON:0006601,3.27e-47,95;UBERON:0002346,2.27e-43,64;UBERON:0003075,2.27e-43,64;UBERON:0007284,2.27e-43,64;UBERON:0010371,3.26e-38,73;UBERON:0000073,4.15e-38,54;UBERON:0001049,4.32e-36,52;UBERON:0005068,4.32e-36,52;UBERON:0006241,4.32e-36,52;UBERON:0007135,4.32e-36,52;UBERON:0003056,1.56e-32,49;UBERON:0000955,2.07e-31,47;UBERON:0006238,2.07e-31,47;UBERON:0010314,4.16e-31,92;UBERON:0002616,1.66e-30,46;UBERON:0003080,2.90e-27,40;UBERON:0002020,2.47e-26,34;UBERON:0002780,3.14e-26,39;UBERON:0001890,3.14e-26,39;UBERON:0006240,3.14e-26,39;UBERON:0003528,4.75e-22,29;UBERON:0002791,4.75e-22,29;UBERON:0001893,4.75e-22,29;UBERON:0000956,1.43e-15,21;UBERON:0001869,1.43e-15,21;UBERON:0000203,1.43e-15,21;UBERON:0002619,6.71e-13,17;UBERON:0002021,4.45e-09,10;UBERON:0000411,4.45e-09,10;UBERON:0001950,4.45e-09,10;UBERON:0003076,6.36e-09,12;UBERON:0003057,6.36e-09,12;UBERON:0002420,1.25e-07,8;UBERON:0007245,1.25e-07,8;UBERON:0010009,1.25e-07,8;UBERON:0010011,1.25e-07,8;UBERON:0000454,1.25e-07,8;UBERON:0000025,3.81e-07,114;UBERON:0004111,9.46e-07,122
|phase1_expression=5.12476310735341,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0.782391344348039,6.97680500417429,5.71184075109627,4.86074747685709,1.67983705950435,2.87505128729943,0,0,0,2.31533492432352,0.85960031981627,0,6.67644320836673,8.46385566835253,10.775133859605,0.677689064138264,0,0,0,0,2.09720077362883,3.45796474789399,5.91030790158323,6.48028503992115,7.15104868594699,12.2829923293636,12.3686382932904,3.79721477566358,5.07980996396653,6.43453150627015,11.0115880999389,15.4501679083077,15.2070467923681,9.62769900430415,8.87430142943374,5.2091337055676,17.0301629390842,14.6318278608237,12.835052813252,9.72274332063103,12.1015928679237,10.6247684120421,1.66597625333005,3.40072020480535,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.259786004602869,0.35333957451034,13.0984380392313,0,0,0,0,0,0,0.68510327831436,0,1.7813056687779,1.21439728736295,1.52232739156071,0.461230994512117,2.11011696773672,1.99900802130698,0.753999547978053,0,0.578397427679647,0,0.323533699894818,0,0.484875253135222,0,9.36898550436951,7.12118803165747,0,0,0,0,20.9706895166752,13.2675174817402,9.29842205635197,11.6462294528825,11.2514801225345,16.2074674756457,11.0324058886075,0.712875546952214,0.248813941220186,0,1.47309299120532,4.16385417480652,5.74755261083682,5.40186389416048,4.21973489940002,6.05524842446818,6.40568601424249,4.59138450342671,5.43277078551933,0.431135985865684,1.13463648100692,0.703804496655795,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,0.900310307305074,0.473489471170421,0,0.462801338662135,0,0,0.467061369468678,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0.402619256281115,8.62188789112922,6.38008596751563,0.330418782983798,0,1.70630600428187,0.464473343720877,0.902072229254653,0,0,0,0,0.658795818896044,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0,0.379335801906163,0.114248512609729,0,1.4255592949172,0.581857461502877,0.49095073923223,0.252946148497029,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,23.7614873181932,16.6440594960929,0,0,2.83957397474631,1.95219372148319,3.66219776145758,0.716906393857656,1.78238939265915,1.98153571552183,1.21443210502468,1.46127928955656,3.16230222357219,11.5675673911851,0.851640511249612,0.534196811001766,0.162886959353576,1.64970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,1.09060118843252,0,0,0,0,1.36175842301515,1.98067203434441,2.8458910432206,2.57204442037911,1.41872186913819,2.67553226403106,1.97458824722545,1.2178597964584,0.469343416127421,0.63549621259146,0.220528398054962,0.16488625294148,0.161464426695906,0.180938774784468,0,0.164140899745061,0.874442509889552,14.0923229527987,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.432021363287205,0.209088296014469,0.436725127492355,0.539457385539283,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,1.76035857968631,1.43224823328345,1.36317147753424,0.724752362478018,0,0,0.405450430580328,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0.750729901804728,0.549454872801795,0.214368379079066,0,13.5540442228096,15.1907328047368,10.8850147553485,8.42080593484069,11.6464028361009,8.3093328712867,12.1504050041725,10.8077088773813,7.70342095273148,10.8729665467882,2.07574695168353,5.1873233542134,2.90247129782028,1.21553358534147,2.09613162627982,1.2869045591501,1.33348036680969,1.44224540067226,1.28367683836726,1.01078884705519,1.2673964994512,0.943131706930381,1.12369808963859,1.02440243847791,1.26358031702349,1.42888107384922,1.15884325944855,1.15745532278223,1.64834360321323,1.76638704161277,1.37147700954166,0.887379030796687,2.38436189947321,1.16277133305863,0.846984423737976,0.761531471025089,1.82927972872773,2.10455769150274,1.22223702461276,1.12228454331548,1.18635018124174,1.37906275325789,1.22769312950907,0.929621047115796,1.92906610981141,3.99696924700713,0.701794825336225,1.07435527024149,0.382576664137687,1.54413993383661,0.927471342481686
|phase1_expression=5.12476310735341,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0.782391344348039,6.97680500417429,5.71184075109627,4.86074747685709,1.67983705950435,2.87505128729943,0,0,0,2.31533492432352,0.85960031981627,0,6.67644320836673,8.46385566835253,10.775133859605,0.677689064138264,0,0,0,0,2.09720077362883,3.45796474789399,5.91030790158323,6.48028503992115,7.15104868594699,12.2829923293636,12.3686382932904,3.79721477566358,5.07980996396653,6.43453150627015,11.0115880999389,15.4501679083077,15.2070467923681,9.62769900430415,8.87430142943374,5.2091337055676,17.0301629390842,14.6318278608237,12.835052813252,9.72274332063103,12.1015928679237,10.6247684120421,1.66597625333005,3.40072020480535,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.259786004602869,0.35333957451034,13.0984380392313,0,0,0,0,0,0,0.68510327831436,0,1.7813056687779,1.21439728736295,1.52232739156071,0.461230994512117,2.11011696773672,1.99900802130698,0.753999547978053,0,0.578397427679647,0,0.323533699894818,0,0.484875253135222,0,9.36898550436951,7.12118803165747,0,0,0,0,20.9706895166752,13.2675174817402,9.29842205635197,11.6462294528825,11.2514801225345,16.2074674756457,11.0324058886075,0.712875546952214,0.248813941220186,0,1.47309299120532,4.16385417480652,5.74755261083682,5.40186389416048,4.21973489940002,6.05524842446818,6.40568601424249,4.59138450342671,5.43277078551933,0.431135985865684,1.13463648100692,0.703804496655795,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,0.900310307305074,0.473489471170421,0,0.462801338662135,0,0,0.467061369468678,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0.402619256281115,8.62188789112922,6.38008596751563,0.330418782983798,0,1.70630600428187,0.464473343720877,0.902072229254653,0,0,0,0,0.658795818896044,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0,0.379335801906163,0.114248512609729,0,1.4255592949172,0.581857461502877,0.49095073923223,0.252946148497029,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,23.7614873181932,16.6440594960929,0,0,2.83957397474631,1.95219372148319,3.66219776145758,0.716906393857656,1.78238939265915,1.98153571552183,1.21443210502468,1.46127928955656,3.16230222357219,11.5675673911851,0.851640511249612,0.534196811001766,0.162886959353576,1.64970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,1.09060118843252,0,0,0,0,1.36175842301515,1.98067203434441,2.8458910432206,2.57204442037911,1.41872186913819,2.67553226403106,1.97458824722545,1.2178597964584,0.469343416127421,0.63549621259146,0.220528398054962,0.16488625294148,0.161464426695906,0.180938774784468,0,0.164140899745061,0.874442509889552,14.0923229527987,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.432021363287205,0.209088296014469,0.436725127492355,0.539457385539283,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,1.76035857968631,1.43224823328345,1.36317147753424,0.724752362478018,0,0,0.405450430580328,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0.750729901804728,0.549454872801795,0.214368379079066,0,13.5540442228096,15.1907328047368,10.8850147553485,8.42080593484069,11.6464028361009,8.3093328712867,12.1504050041725,10.8077088773813,7.70342095273148,10.8729665467882,2.07574695168353,5.1873233542134,2.90247129782028,1.21553358534147,2.09613162627982,1.2869045591501,1.33348036680969,1.44224540067226,1.28367683836726,1.01078884705519,1.2673964994512,0.943131706930381,1.12369808963859,1.02440243847791,1.26358031702349,1.42888107384922,1.15884325944855,1.15745532278223,1.64834360321323,1.76638704161277,1.37147700954166,0.887379030796687,2.38436189947321,1.16277133305863,0.846984423737976,0.761531471025089,1.82927972872773,2.10455769150274,1.22223702461276,1.12228454331548,1.18635018124174,1.37906275325789,1.22769312950907,0.929621047115796,1.92906610981141,3.99696924700713,0.701794825336225,1.07435527024149,0.382576664137687,1.54413993383661,0.927471342481686
|short_description=p3@Scrn1
}}
}}

Latest revision as of 13:56, 1 October 2015

Short description:p3@Scrn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Scrn1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 85bp_to_NM_027268, uc009bzw.1_5end
EntrezGene:Scrn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Scrn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.62
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F93.40
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A420.97
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F19.30
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F211.25
diencephalon, adult.CNhs10482.20-12F216.21
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C64.16
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E76.41
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E88.62
hippocampus, neonate N00.CNhs11228.627-43G16.38
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C223.76
medulla oblongata, neonate N30.CNhs11200.1396-42A316.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C914.09
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.10e-2444
neurectodermal cell2.10e-2444
neural cell1.72e-2343
neuron4.35e-2033
neuronal stem cell4.35e-2033
neuroblast4.35e-2033
electrically signaling cell4.35e-2033
CNS neuron (sensu Vertebrata)4.41e-1823
neuroblast (sensu Vertebrata)4.41e-1823
electrically responsive cell3.45e-1639
electrically active cell3.45e-1639
embryonic cell2.47e-1070

Uber anatomy
Ontology termp-valuen
nervous system6.79e-4975
central nervous system7.34e-4873
ectoderm-derived structure3.27e-4795
ectoderm3.27e-4795
presumptive ectoderm3.27e-4795
neurectoderm2.27e-4364
neural plate2.27e-4364
presumptive neural plate2.27e-4364
ecto-epithelium3.26e-3873
regional part of nervous system4.15e-3854
neural tube4.32e-3652
neural rod4.32e-3652
future spinal cord4.32e-3652
neural keel4.32e-3652
pre-chordal neural plate1.56e-3249
brain2.07e-3147
future brain2.07e-3147
structure with developmental contribution from neural crest4.16e-3192
regional part of brain1.66e-3046
anterior neural tube2.90e-2740
gray matter2.47e-2634
regional part of forebrain3.14e-2639
forebrain3.14e-2639
future forebrain3.14e-2639
brain grey matter4.75e-2229
regional part of telencephalon4.75e-2229
telencephalon4.75e-2229
cerebral cortex1.43e-1521
cerebral hemisphere1.43e-1521
pallium1.43e-1521
regional part of cerebral cortex6.71e-1317
occipital lobe4.45e-0910
visual cortex4.45e-0910
neocortex4.45e-0910
posterior neural tube6.36e-0912
chordal neural plate6.36e-0912
basal ganglion1.25e-078
nuclear complex of neuraxis1.25e-078
aggregate regional part of brain1.25e-078
collection of basal ganglia1.25e-078
cerebral subcortex1.25e-078
tube3.81e-07114
anatomical conduit9.46e-07122
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