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FFCP PHASE1:Mm9::chr5:106128964..106129060,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=231549
|EntrezGene=231549
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BGR2
|UniProt=Q8BGR2
|association_with_transcript=0bp_to_ENSMUST00000060531,NM_001122768,uc008ylg.2_5end
|association_with_transcript=0bp_to_ENSMUST00000060531,NM_001122768,uc008ylg.2_5end
|cluster_id=chr5:106128964..106129060,+
|description=CAGE_peak_1_at_Lrrc8d_5end
|description=CAGE_peak_1_at_Lrrc8d_5end
|id=chr5:106128964..106129060,+
|id=chr5:106128964..106129060,+
|ontology_enrichment_celltype=CL:0000540!1.75e-14!33;CL:0000047!1.75e-14!33;CL:0000031!1.75e-14!33;CL:0000404!1.75e-14!33;CL:0000221!1.25e-11!44;CL:0000133!1.25e-11!44;CL:0002319!3.59e-11!43;CL:0000117!3.48e-09!23;CL:0000337!3.48e-09!23;CL:0000393!3.45e-08!39;CL:0000211!3.45e-08!39
|ontology_enrichment_celltype=CL:0000540!1.75e-14!33;CL:0000047!1.75e-14!33;CL:0000031!1.75e-14!33;CL:0000404!1.75e-14!33;CL:0000221!1.25e-11!44;CL:0000133!1.25e-11!44;CL:0002319!3.59e-11!43;CL:0000117!3.48e-09!23;CL:0000337!3.48e-09!23;CL:0000393!3.45e-08!39;CL:0000211!3.45e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000540,1.75e-14,33;CL:0000047,1.75e-14,33;CL:0000031,1.75e-14,33;CL:0000404,1.75e-14,33;CL:0000221,1.25e-11,44;CL:0000133,1.25e-11,44;CL:0002319,3.59e-11,43;CL:0000117,3.48e-09,23;CL:0000337,3.48e-09,23;CL:0000393,3.45e-08,39;CL:0000211,3.45e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.59e-20!75;UBERON:0001016!1.59e-20!75;UBERON:0004121!4.09e-20!102;UBERON:0000924!4.09e-20!102;UBERON:0006601!4.09e-20!102;UBERON:0001017!5.81e-20!73;UBERON:0005743!5.81e-20!73;UBERON:0002346!3.28e-14!71;UBERON:0003075!3.28e-14!71;UBERON:0007284!3.28e-14!71;UBERON:0000033!3.44e-13!63;UBERON:0003056!1.43e-12!49;UBERON:0001049!4.20e-12!52;UBERON:0005068!4.20e-12!52;UBERON:0006241!4.20e-12!52;UBERON:0007135!4.20e-12!52;UBERON:0003080!1.12e-11!40;UBERON:0002780!1.87e-11!39;UBERON:0001890!1.87e-11!39;UBERON:0006240!1.87e-11!39;UBERON:0000955!1.95e-11!50;UBERON:0006238!1.95e-11!50;UBERON:0002616!3.72e-11!49;UBERON:0002020!7.26e-09!34;UBERON:0002791!8.39e-08!29;UBERON:0003528!8.39e-08!29;UBERON:0001893!8.39e-08!29
|ontology_enrichment_uberon=UBERON:0000073!1.59e-20!75;UBERON:0001016!1.59e-20!75;UBERON:0004121!4.09e-20!102;UBERON:0000924!4.09e-20!102;UBERON:0006601!4.09e-20!102;UBERON:0001017!5.81e-20!73;UBERON:0005743!5.81e-20!73;UBERON:0002346!3.28e-14!71;UBERON:0003075!3.28e-14!71;UBERON:0007284!3.28e-14!71;UBERON:0000033!3.44e-13!63;UBERON:0003056!1.43e-12!49;UBERON:0001049!4.20e-12!52;UBERON:0005068!4.20e-12!52;UBERON:0006241!4.20e-12!52;UBERON:0007135!4.20e-12!52;UBERON:0003080!1.12e-11!40;UBERON:0002780!1.87e-11!39;UBERON:0001890!1.87e-11!39;UBERON:0006240!1.87e-11!39;UBERON:0000955!1.95e-11!50;UBERON:0006238!1.95e-11!50;UBERON:0002616!3.72e-11!49;UBERON:0002020!7.26e-09!34;UBERON:0002791!8.39e-08!29;UBERON:0003528!8.39e-08!29;UBERON:0001893!8.39e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.59e-20,75;UBERON:0004121,3.46e-20,95;UBERON:0000924,3.46e-20,95;UBERON:0006601,3.46e-20,95;UBERON:0001017,5.81e-20,73;UBERON:0002346,1.72e-14,64;UBERON:0003075,1.72e-14,64;UBERON:0007284,1.72e-14,64;UBERON:0010371,3.65e-14,73;UBERON:0003056,1.43e-12,49;UBERON:0000073,2.53e-12,54;UBERON:0001049,4.20e-12,52;UBERON:0005068,4.20e-12,52;UBERON:0006241,4.20e-12,52;UBERON:0007135,4.20e-12,52;UBERON:0003080,1.12e-11,40;UBERON:0002780,1.87e-11,39;UBERON:0001890,1.87e-11,39;UBERON:0006240,1.87e-11,39;UBERON:0000955,5.51e-11,47;UBERON:0006238,5.51e-11,47;UBERON:0002616,1.04e-10,46;UBERON:0002020,7.26e-09,34;UBERON:0003528,8.39e-08,29;UBERON:0002791,8.39e-08,29;UBERON:0001893,8.39e-08,29;UBERON:0010314,4.59e-07,92
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8.4317206267499,7.32916637555283,13.3503422490547,41.629733976824,9.01908701894705,26.1653955576963,22.005979230794,25.8620080497583,22.8612887555584,19.4299544314395,33.0947412981026,36.1968189866181,40.1611289150473,13.7702948870823,16.4177103566983,18.6446561170625,15.8125667926328,14.1741120887462,12.0826365369349,15.0382424360684,14.7024202538136,16.9475583823156,13.4397469728865,12.8227391434147,16.46067023748,13.5107088083366,16.8602133679772,14.1431407211284,19.2846888599589,15.8711268530648,25.5283846380174,29.9644281075649,25.5184616873399,14.8755987404787,11.6363134779733,19.2309205480628,14.1483130192183,21.0660283694853,42.35638819628,35.4450432110526,37.2382083735608,39.1825255743608,33.5690434687615,28.7049681008086,29.7009900101995,29.7211994127986,22.203978040226,32.1011393286128,16.9173376562208,37.5083380996969,26.9759097091532,23.0951381214879,17.8171188233785,15.4428547098012,24.0026466025744,19.1612603232172,25.994455976937,21.4792629999228,24.334012789463,19.9943921869241,17.6046034043379,19.1435205690559,21.9403491410443,19.0517476513229,21.0909473219637,20.0625589282253,18.1317796353455,20.1662520584124,22.9722399098228,17.9250564220931,14.7830437767339,19.6217662453643,20.9863918326187,17.8536822651437,20.8537889074961,14.7319038405192,20.2348129630334,31.9851094844911,21.828843334848,20.4889323341172,15.1415485972785,16.8881156892703,24.499139594605,36.7221549568781,23.8610240614317,31.3711738910516,21.6155815237793,17.6473135295612,21.7955765483196
|phase1_expression=39.8770629290937,13.2610654902957,13.1949779422965,38.1104906246606,30.5546395267272,12.255186849568,10.0453435456076,55.2647824329946,38.5761098695567,56.1754863172784,11.8140398075598,20.9800778157735,18.6608795625014,18.1834437031515,8.66085380720723,8.90891176515234,1.39912375625629,29.6534435436743,30.987861994897,34.7999514474385,19.2197835741418,18.7659897769673,13.5823890352246,16.3192271249275,13.0763290208287,11.4846392823004,7.75371593086335,6.67960821326256,14.0617330397717,10.5852654499171,8.42575940490158,9.52546010189447,5.53558308826113,47.5445043046316,9.53210345179206,5.81821258754723,6.94175811292055,75.7542251633803,50.0054620495232,40.3113282859825,98.2346585011794,66.2554120409692,59.7177734228319,4.78407908307194,1.72340783073175,2.0190142737785,3.12956537739216,20.9304150125229,10.3252505885202,9.72149495371417,15.5384928004152,23.0004102983955,44.6301732113579,29.0144856804538,24.5348473373999,7.46052364504246,3.15186783932632,1.03134418455488,54.2208115103722,64.007908491916,61.4816461400994,5.08266798103698,4.4464739805557,26.996991518442,48.4544517657817,28.419204597844,37.1504137042822,39.5744854481201,50.6005308065371,57.6475356676319,55.9464397194676,35.4207220660716,26.7250934551452,57.9381480286733,57.1239007268689,68.0221902091416,33.0347642998166,35.1140179734266,32.4109785170674,61.1952375068099,60.8392829956024,47.9240300912219,25.9640189071284,28.138130501584,36.3659829708808,44.4889164065238,33.4573449877892,42.4990736481685,28.6245010799436,45.1917929438577,43.18980881655,17.2084775396277,14.2793980078628,22.1278308571505,19.4932925234301,21.0572636935748,17.555552516469,0,0,0,46.9008587856346,0,0,0,8.22665955842614,8.61423542615335,9.60496445528088,22.0374887857786,31.3314839213078,33.9932498458449,18.3894446372104,25.5751001782199,20.2941637585331,22.4576734423408,34.6886686050329,27.897983275188,8.89901883843746,44.8258006451726,32.7305904221453,11.9707468961083,13.2504911076236,15.5160081003271,26.0948465705371,24.59358694897,22.2013509222262,15.0719662573069,38.9399154644241,22.7963037777495,31.1322056329008,36.5489160147767,54.4425717354165,70.8690545916555,41.0225395653772,40.4030422581922,41.1420328227929,40.5603157669394,20.1641940423626,21.5224059155461,11.1198013710817,42.7196967449542,31.0987858680862,20.2313851901456,26.289070951581,22.4550178575215,35.3109430595392,33.8220221552003,33.8263225660621,43.2034629134156,26.9459991166053,31.2025032276902,26.0407663762644,22.3579647076126,19.1852601965663,13.9300866608867,9.67176041117334,26.0734889532226,29.4929538671559,28.3082697826187,35.2362739250535,12.8417978972011,11.7263029990548,10.0834754418168,16.5721314909647,17.7087808572663,13.2669717083145,13.9520366850245,13.1453966685813,16.2303825890366,13.8230273927324,15.9242440156722,18.1594133382717,15.3509986796599,18.2226595691572,19.9967563952954,40.5859600728766,66.1676657598799,18.8338706300765,11.3713743665324,26.6610313169042,23.4559038579043,19.330119198314,12.5043785266472,16.4559752445204,13.8864707062168,16.6085171540579,14.987604879885,15.3314477368164,17.9060824837036,21.8359777573415,19.7740269903929,16.6426298403515,21.706398784726,39.8302592001472,37.1307665981619,48.4643263394246,42.9704301753613,39.7602598693633,46.7805918668425,40.3449106852761,33.9503340353085,37.8366934097713,50.71623437186,17.7871576252289,12.0128476115588,10.8107447312262,9.219346607779,10.7515864335907,12.5412123071257,18.0784354764808,17.8371605219503,28.5357999124062,18.6701760967895,30.1913233707445,40.1912223481984,34.6361817157162,35.8662006684899,30.8563551257689,40.0428122731595,38.2439103644872,17.2437184711141,22.8150967018836,24.2735472658519,23.4690248288502,23.9533948141797,26.4228441383475,35.3191902622616,35.6255425679992,36.9846031713454,33.3260466494148,30.642439851843,35.7457912462404,45.4198043945946,54.284862218138,39.1612092349471,46.2258416637894,41.3905119457099,37.5688380571433,36.5700462167674,1.63934945376675,18.1779067587149,38.4920027687833,43.7291393612235,59.4568577742525,58.5473554983752,60.8240380244936,65.6737551430091,57.8879303395099,58.1589157243511,60.4790300258181,37.5945940213514,32.0784592570687,15.4917075190512,25.8990265372186,18.476653772924,7.96470830039777,27.4342118855129,22.3719432153916,15.4656165399836,16.5369060013233,21.5204603560749,24.0338312646446,20.3578888507403,29.2327850275471,17.6980584444057,13.7044191147498,14.4389760547462,53.7894577090985,36.9125242764186,45.1461806401813,36.8659700254339,42.7389963077879,44.2354667653135,36.694431594273,57.8483403317739,12.9069439435041,18.6412222360162,12.5701186891328,19.4565778470946,22.7664841641227,17.3098094543807,15.8765217524172,11.1615811826642,16.3229268512716,36.7142097980809,17.2579589605831,21.4642342681751,16.4823129359043,10.9253705062721,11.3456209008451,13.9554685655979,57.4527093379231,42.545241506392,58.043988997858,4.77335309007557,29.5774153998362,21.9585024496997,17.38885987231,12.9634743528971,11.7915784422936,11.7331981354794,18.4317206267499,7.32916637555283,13.3503422490547,41.629733976824,9.01908701894705,26.1653955576963,22.005979230794,25.8620080497583,22.8612887555584,19.4299544314395,33.0947412981026,36.1968189866181,40.1611289150473,13.7702948870823,16.4177103566983,18.6446561170625,15.8125667926328,14.1741120887462,12.0826365369349,15.0382424360684,14.7024202538136,16.9475583823156,13.4397469728865,12.8227391434147,16.46067023748,13.5107088083366,16.8602133679772,14.1431407211284,19.2846888599589,15.8711268530648,25.5283846380174,29.9644281075649,25.5184616873399,14.8755987404787,11.6363134779733,19.2309205480628,14.1483130192183,21.0660283694853,42.35638819628,35.4450432110526,37.2382083735608,39.1825255743608,33.5690434687615,28.7049681008086,29.7009900101995,29.7211994127986,22.203978040226,32.1011393286128,16.9173376562208,37.5083380996969,26.9759097091532,23.0951381214879,17.8171188233785,15.4428547098012,24.0026466025744,19.1612603232172,25.994455976937,21.4792629999228,24.334012789463,19.9943921869241,17.6046034043379,19.1435205690559,21.9403491410443,19.0517476513229,21.0909473219637,20.0625589282253,18.1317796353455,20.1662520584124,22.9722399098228,17.9250564220931,14.7830437767339,19.6217662453643,20.9863918326187,17.8536822651437,20.8537889074961,14.7319038405192,20.2348129630334,31.9851094844911,21.828843334848,20.4889323341172,15.1415485972785,16.8881156892703,24.499139594605,36.7221549568781,23.8610240614317,31.3711738910516,21.6155815237793,17.6473135295612,21.7955765483196
|short_description=p1@Lrrc8d
|short_description=p1@Lrrc8d
}}
}}

Latest revision as of 13:44, 1 October 2015

Short description:p1@Lrrc8d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrc8d_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000060531, NM_001122768, uc008ylg.2_5end
EntrezGene:Lrrc8d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrrc8d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G739.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I338.11
CD326+ enterocyte, pool2.CNhs13197.11849-124I430.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E955.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E738.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F256.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F120.98
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E418.66
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.91
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A229.65
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A634.80
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.58
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.08
GP2+ M cell, pool1.CNhs13228.11845-124H911.48
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B914.06
Ileum epithelium, pool2.CNhs13232.10253-104C110.59
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G875.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H150.01
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H340.31
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G998.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H266.26
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H459.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.93
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C415.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C423.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A244.63
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.01
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.53
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C354.22
Mouse Granule cells, donor2.CNhs12357.11731-123E364.01
Mouse Granule cells, donor3.CNhs12108.11636-122C761.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C727.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E748.45
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D228.42
Mouse Microglia, donor1.CNhs12629.11718-123C837.15
Mouse Microglia, donor2.CNhs12634.11736-123E839.57
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D550.60
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F557.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D955.95
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F135.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D257.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F257.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D668.02
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D333.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F335.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D461.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F460.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D847.92
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I636.37
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D644.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.46
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E142.50
Mouse Schwann, donor1.CNhs12507.11728-123D928.62
Mouse Schwann, donor2.CNhs12573.11746-123F945.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G343.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C822.13
Mouse hepatocyte, donor6.CNhs13090.11822-124F419.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G646.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.04
accessory axillary lymph node, adult.CNhs10475.1063-29H931.33
adrenal gland, adult.CNhs10508.49-24D733.99
adrenal gland, embryo E14.CNhs11038.406-44C518.39
adrenal gland, embryo E16.CNhs11004.1254-43D625.58
adrenal gland, embryo E17.CNhs11043.1263-45I120.29
adrenal gland, embryo E18.CNhs11026.1262-18F522.46
adrenal gland, neonate N00.CNhs11191.1311-23C134.69
adrenal gland, neonate N25.CNhs11223.1377-27I327.90
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H144.83
bone (os femoris), adult.CNhs10483.56-12G232.73
bone (os femoris), neonate N02.CNhs11227.1985-43F511.97
bone (os femoris), neonate N16.CNhs11225.1525-43A613.25
bone (os femoris), neonate N20.CNhs11195.1350-25C315.52
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B224.59
cerebellum, neonate N30.CNhs11135.1395-42I222.20
colon, adult.CNhs10468.36-18H715.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C738.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.13
corpora quadrigemina, adult.CNhs10501.16-22A436.55
corpus striatum, adult.CNhs10487.19-21D854.44
corpus striatum, neonate N00.CNhs11226.630-43F170.87
cortex, adult.CNhs10473.12-14D541.02
cortex, neonate N30.CNhs11107.1392-42F240.40
diencephalon, adult.CNhs10482.20-12F241.14
diencephalon, neonate N30.CNhs11201.1388-42B240.56
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A221.52
epididymis, adult.CNhs10490.58-23B211.12
eyeball, adult.CNhs10484.31-12G442.72
eyeball, embryo E12.CNhs11016.345-16C631.10
eyeball, embryo E14.CNhs10521.399-16E220.23
eyeball, embryo E15.CNhs10593.426-16C926.29
eyeball, embryo E17.CNhs11023.1261-18D422.46
eyeball, neonate N00.CNhs11207.633-15C635.31
eyeball, neonate N01.CNhs11140.1532-43E733.82
eyeball, neonate N02.CNhs11205.1551-44G833.83
eyeball, neonate N16.CNhs11188.777-19A243.20
forelimb, embryo E11.CNhs10596.335-25E226.95
forelimb, embryo E12.CNhs10600.359-14H231.20
forelimb, embryo E13.CNhs10589.384-1E226.04
forelimb, embryo E14.CNhs10577.413-26A822.36
forelimb, embryo E15.CNhs11007.437-20E719.19
forelimb, embryo E17.CNhs10598.1517-43C413.93
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I626.07
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C829.49
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D228.31
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D535.24
heart, embryo E11.CNhs10586.331-24E912.84
heart, embryo E12.CNhs11015.353-12F511.73
heart, embryo E13.CNhs11013.376-3I910.08
heart, embryo E14.CNhs10597.403-26D416.57
heart, embryo E15.CNhs11017.431-16C817.71
heart, embryo E16.CNhs11021.457-17C613.27
heart, embryo E17.CNhs11025.479-18E513.95
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E316.23
heart, neonate N03.CNhs11221.1349-25I213.82
heart, neonate N10.CNhs11118.749-24G115.92
heart, neonate N16.CNhs11209.782-15G118.16
heart, neonate N20.CNhs11127.821-26I615.35
heart, neonate N25.CNhs11196.1351-25D318.22
heart, neonate N30.CNhs11202.1390-42D220.00
hippocampus, adult.CNhs10478.13-16E840.59
hippocampus, neonate N00.CNhs11228.627-43G166.17
intestinal mucosa, adult.CNhs10506.860-29I318.83
intestine, adult.CNhs10496.178-9A311.37
intestine, embryo E12.CNhs11019.1251-16I526.66
intestine, embryo E13.CNhs11010.381-16D523.46
intestine, embryo E15.CNhs10602.976-16D819.33
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D316.46
intestine, embryo E18.CNhs10526.1289-20F713.89
intestine, neonate N00.CNhs11126.644-26D116.61
intestine, neonate N01.CNhs11192.1322-23E914.99
intestine, neonate N06.CNhs11102.688-20B815.33
intestine, neonate N07.CNhs11095.720-20F217.91
intestine, neonate N10.CNhs11098.755-23A521.84
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E316.64
intestine, neonate N30.CNhs11131.1384-42G121.71
kidney, embryo E14.CNhs10606.411-4I939.83
kidney, embryo E15.CNhs10997.434-16F837.13
kidney, embryo E16.CNhs10584.464-22A548.46
kidney, embryo E17.CNhs11028.483-18I242.97
kidney, embryo E18.CNhs11001.1288-20C739.76
kidney, neonate N00.CNhs11214.646-21G746.78
kidney, neonate N10.CNhs11206.758-6D540.34
kidney, neonate N20.CNhs11113.832-19I133.95
kidney, neonate N25.CNhs11122.1353-25F337.84
kidney, neonate N30.CNhs11203.1385-42H150.72
liver, adult pregnant day01.CNhs10466.508-5B217.79
liver, embryo E12.CNhs10601.355-15F812.01
liver, embryo E13.CNhs10524.378-3H610.81
liver, embryo E14.CNhs10594.409-16E19.22
liver, embryo E15.CNhs10520.433-16D710.75
liver, embryo E16.CNhs10523.462-17F512.54
liver, embryo E17.CNhs10510.481-18A318.08
liver, embryo E18.CNhs10579.499-43G417.84
liver, neonate N00.CNhs11117.641-24F428.54
liver, neonate N03.CNhs11123.1345-25G218.67
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H240.19
liver, neonate N10.CNhs11115.751-24B934.64
liver, neonate N20.CNhs11220.823-25A335.87
liver, neonate N25.CNhs11198.1368-26H130.86
liver, neonate N30.CNhs11106.1382-42D140.04
lung, adult.CNhs10474.28-22B138.24
lung, embryo E12.CNhs10522.354-16G217.24
lung, embryo E14.CNhs10604.404-26F822.82
lung, embryo E15.CNhs11020.432-17C524.27
lung, embryo E16.CNhs10998.458-17B623.47
lung, embryo E17.CNhs10605.480-44A623.95
lung, embryo E18.CNhs10583.1287-20I626.42
lung, neonate N00.CNhs11224.640-42C635.32
lung, neonate N06.CNhs11212.683-20E535.63
lung, neonate N07.CNhs11111.715-19A336.98
lung, neonate N10.CNhs11219.750-23E633.33
lung, neonate N20.CNhs11109.822-18A430.64
lung, neonate N25.CNhs11119.1359-25C735.75
lung, neonate N30.CNhs11133.1394-42H245.42
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A154.28
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A139.16
mammary gland, adult lactating day02.CNhs10480.595-22B646.23
mammary gland, adult pregnant day19.CNhs10476.588-5H241.39
medulla oblongata, adult.CNhs10477.17-12C237.57
medulla oblongata, neonate N30.CNhs11200.1396-42A336.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E138.49
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E243.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E359.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D758.55
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D860.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D965.67
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D457.89
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D558.16
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D660.48
olfactory brain, adult.CNhs10489.18-22I937.59
ovary, adult.CNhs10507.91-2I732.08
ovary, embryo E18.CNhs11040.505-44H715.49
ovary, neonate N00.CNhs11217.1299-22I425.90
oviduct, adult pregnant day01.CNhs10500.988-6G618.48
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F427.43
pancreas, embryo E15.CNhs11042.1556-45F222.37
pancreas, embryo E16.CNhs11003.460-26E515.47
pancreas, embryo E17.CNhs10599.1558-45G316.54
pancreas, embryo E18.CNhs10580.1535-43I721.52
pancreas, neonate N00.CNhs11105.645-26G924.03
pancreas, neonate N01.CNhs11138.1531-43D720.36
pancreas, neonate N02.CNhs11139.1539-43D829.23
pancreas, neonate N16.CNhs11136.787-43B617.70
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G853.79
pituitary gland, embryo E12.CNhs11018.346-16E636.91
pituitary gland, embryo E13.CNhs11009.370-44C745.15
pituitary gland, embryo E14.CNhs11037.398-44A536.87
pituitary gland, embryo E15.CNhs10592.427-16B942.74
pituitary gland, embryo E16.CNhs11036.449-43F644.24
pituitary gland, embryo E17.CNhs11039.1265-44F536.69
pituitary gland, neonate N00.CNhs11190.1308-22E957.85
placenta, adult pregnant day10.CNhs10472.539-13I712.91
placenta, adult pregnant day17.CNhs10464.577-18G318.64
prostate, adult.CNhs10470.859-1F812.57
skin, adult.CNhs10492.30-1C319.46
skin, neonate N00.CNhs11124.650-25G422.77
skin, neonate N03.CNhs11215.662-22H317.31
skin, neonate N06.CNhs11097.693-20I515.88
skin, neonate N10.CNhs11108.762-6C411.16
small intestine, neonate N16.CNhs11114.790-21I116.32
spinal cord, adult.CNhs10505.24-13C936.71
spleen, adult.CNhs10465.25-2G217.26
spleen, embryo E16.CNhs11035.461-43C121.46
spleen, embryo E18.CNhs11011.1271-21F216.48
spleen, neonate N10.CNhs11116.752-24D110.93
spleen, neonate N20.CNhs11112.824-19H111.35
spleen, neonate N25.CNhs11099.1354-25G313.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C657.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C942.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D358.04
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E329.58
stomach, embryo E15.CNhs10603.1252-16G821.96
stomach, embryo E16.CNhs11022.459-17D417.39
stomach, embryo E17.CNhs11006.1035-18D512.96
stomach, embryo E18.CNhs10999.1286-20C611.79
stomach, neonate N03.CNhs11193.1340-24B811.73
stomach, neonate N07.CNhs11210.718-18A918.43
stomach, neonate N25.CNhs11104.1355-25E47.33
stomach, neonate N30.CNhs11134.1386-42I113.35
submandibular gland, adult.CNhs10469.59-29C141.63
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F526.17
testis, embryo E15.CNhs11034.443-27C522.01
testis, embryo E16.CNhs11033.470-26G525.86
testis, embryo E17.CNhs11029.486-18I522.86
testis, embryo E18.CNhs11027.503-18G519.43
testis, neonate N00.CNhs11189.1300-22B733.09
testis, neonate N07.CNhs11222.726-26I436.20
testis, neonate N10.CNhs11204.763-44D940.16
testis, neonate N20.CNhs11110.839-18H313.77
testis, neonate N30.CNhs11130.1391-42E216.42
thymus, adult.CNhs10471.38-12B518.64
thymus, embryo E14.CNhs11041.402-44I415.81
thymus, embryo E15.CNhs11005.430-45I214.17
thymus, embryo E16.CNhs11002.456-26C512.08
thymus, embryo E17.CNhs10581.478-18C115.04
thymus, embryo E18.CNhs10595.1273-19G414.70
thymus, neonate N02.CNhs11181.1541-43F816.95
thymus, neonate N03.CNhs11137.2104-43C713.44
thymus, neonate N06.CNhs11197.681-26C412.82
thymus, neonate N07.CNhs11211.713-19D316.46
thymus, neonate N10.CNhs11194.748-24E413.51
thymus, neonate N20.CNhs11186.820-7A216.86
thymus, neonate N25.CNhs11125.1362-25G714.14
thymus, neonate N30.CNhs11132.1393-42G219.28
tongue, adult.CNhs10499.32-1B415.87
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H325.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F729.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.52
urinary bladder, adult.CNhs10481.879-12E414.88
uterus, adult pregnant day19.CNhs10497.590-15F511.64
uterus, adult.CNhs10509.92-27E519.23
vagina, adult.CNhs10502.89-27D514.15
vesicular gland, adult.CNhs10491.51-27F821.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.36
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.24
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D739.18
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A528.70
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.20
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.10
whole body, embryo E11.CNhs11014.324-5I816.92
whole body, embryo E12.CNhs10587.857-27C937.51
whole body, embryo E13.CNhs10512.372-23H226.98
whole body, embryo E14.5.CNhs10578.420-27D223.10
whole body, embryo E14.CNhs10519.395-14B117.82
whole body, embryo E16.CNhs10514.453-14F215.44
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.48
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.33
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.06
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.17
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G531.99
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.89
whole body, embryo E17.5.CNhs10513.490-9F924.50
whole body, embryo E17.CNhs10517.475-3I536.72
whole body, embryo E18.CNhs10516.493-3B323.86
whole body, neonate N00.CNhs10525.657-19C231.37
whole body, neonate N01.CNhs10576.659-23C621.62
whole body, neonate N06.CNhs10515.692-21D117.65
whole body, neonate N10.CNhs10518.761-6B421.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.75e-1433
neuronal stem cell1.75e-1433
neuroblast1.75e-1433
electrically signaling cell1.75e-1433
ectodermal cell1.25e-1144
neurectodermal cell1.25e-1144
neural cell3.59e-1143
CNS neuron (sensu Vertebrata)3.48e-0923
neuroblast (sensu Vertebrata)3.48e-0923
electrically responsive cell3.45e-0839
electrically active cell3.45e-0839

Uber anatomy
Ontology termp-valuen
nervous system1.59e-2075
ectoderm-derived structure3.46e-2095
ectoderm3.46e-2095
presumptive ectoderm3.46e-2095
central nervous system5.81e-2073
neurectoderm1.72e-1464
neural plate1.72e-1464
presumptive neural plate1.72e-1464
ecto-epithelium3.65e-1473
pre-chordal neural plate1.43e-1249
regional part of nervous system2.53e-1254
neural tube4.20e-1252
neural rod4.20e-1252
future spinal cord4.20e-1252
neural keel4.20e-1252
anterior neural tube1.12e-1140
regional part of forebrain1.87e-1139
forebrain1.87e-1139
future forebrain1.87e-1139
brain5.51e-1147
future brain5.51e-1147
regional part of brain1.04e-1046
gray matter7.26e-0934
brain grey matter8.39e-0829
regional part of telencephalon8.39e-0829
telencephalon8.39e-0829
structure with developmental contribution from neural crest4.59e-0792
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