FFCP PHASE1:Mm9::chr15:98956944..98957047,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72572 | |EntrezGene=72572 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1007 | |MCL_coexpression_id=1007 | ||
|TSSclassifier=NA | |||
|UniProt=Q8K1N4 | |UniProt=Q8K1N4 | ||
|association_with_transcript=0bp_to_ENSMUST00000063517_5end | |association_with_transcript=0bp_to_ENSMUST00000063517_5end | ||
|cluster_id=chr15:98956944..98957047,+ | |||
|description=CAGE_peak_1_at_Spats2_5end | |description=CAGE_peak_1_at_Spats2_5end | ||
|id=chr15:98956944..98957047,+ | |id=chr15:98956944..98957047,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.81e-09!23;CL:0000337!5.81e-09!23;CL:0000540!3.32e-08!33;CL:0000047!3.32e-08!33;CL:0000031!3.32e-08!33;CL:0000404!3.32e-08!33 | |ontology_enrichment_celltype=CL:0000117!5.81e-09!23;CL:0000337!5.81e-09!23;CL:0000540!3.32e-08!33;CL:0000047!3.32e-08!33;CL:0000031!3.32e-08!33;CL:0000404!3.32e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.62e-09,23;CL:0000337,5.62e-09,23;CL:0000540,3.22e-08,33;CL:0000047,3.22e-08,33;CL:0000031,3.22e-08,33;CL:0000404,3.22e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.29e-08!73;UBERON:0005743!1.29e-08!73;UBERON:0000073!2.28e-08!75;UBERON:0001016!2.28e-08!75;UBERON:0004121!8.28e-08!102;UBERON:0000924!8.28e-08!102;UBERON:0006601!8.28e-08!102;UBERON:0002346!1.20e-07!71;UBERON:0003075!1.20e-07!71;UBERON:0007284!1.20e-07!71;UBERON:0002020!2.52e-07!34;UBERON:0003056!2.75e-07!49;UBERON:0000033!4.15e-07!63;UBERON:0000153!6.25e-07!94;UBERON:0001049!7.19e-07!52;UBERON:0005068!7.19e-07!52;UBERON:0006241!7.19e-07!52;UBERON:0007135!7.19e-07!52 | |ontology_enrichment_uberon=UBERON:0001017!1.29e-08!73;UBERON:0005743!1.29e-08!73;UBERON:0000073!2.28e-08!75;UBERON:0001016!2.28e-08!75;UBERON:0004121!8.28e-08!102;UBERON:0000924!8.28e-08!102;UBERON:0006601!8.28e-08!102;UBERON:0002346!1.20e-07!71;UBERON:0003075!1.20e-07!71;UBERON:0007284!1.20e-07!71;UBERON:0002020!2.52e-07!34;UBERON:0003056!2.75e-07!49;UBERON:0000033!4.15e-07!63;UBERON:0000153!6.25e-07!94;UBERON:0001049!7.19e-07!52;UBERON:0005068!7.19e-07!52;UBERON:0006241!7.19e-07!52;UBERON:0007135!7.19e-07!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.24e-08,73;UBERON:0001016,2.21e-08,75;UBERON:0010314,4.27e-08,92;UBERON:0002346,4.55e-08,64;UBERON:0003075,4.55e-08,64;UBERON:0007284,4.55e-08,64;UBERON:0004121,5.36e-08,95;UBERON:0000924,5.36e-08,95;UBERON:0006601,5.36e-08,95;UBERON:0002020,2.45e-07,34;UBERON:0003056,2.68e-07,49;UBERON:0010371,4.27e-07,73;UBERON:0001049,7.02e-07,52;UBERON:0005068,7.02e-07,52;UBERON:0006241,7.02e-07,52;UBERON:0007135,7.02e-07,52;UBERON:0000073,7.03e-07,54;UBERON:0000922,8.78e-07,320 | |||
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| ||
|short_description=p1@Spats2 | |short_description=p1@Spats2 | ||
}} | }} |
Latest revision as of 13:40, 1 October 2015
Short description: | p1@Spats2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spats2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1007 |
Association with transcript: | 0bp_to_ENSMUST00000063517_5end |
EntrezGene: | Spats2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.62e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.62e-09 | 23 |
neuron | 3.22e-08 | 33 |
neuronal stem cell | 3.22e-08 | 33 |
neuroblast | 3.22e-08 | 33 |
electrically signaling cell | 3.22e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.24e-08 | 73 |
nervous system | 2.21e-08 | 75 |
structure with developmental contribution from neural crest | 4.27e-08 | 92 |
neurectoderm | 4.55e-08 | 64 |
neural plate | 4.55e-08 | 64 |
presumptive neural plate | 4.55e-08 | 64 |
ectoderm-derived structure | 5.36e-08 | 95 |
ectoderm | 5.36e-08 | 95 |
presumptive ectoderm | 5.36e-08 | 95 |
gray matter | 2.45e-07 | 34 |
pre-chordal neural plate | 2.68e-07 | 49 |
ecto-epithelium | 4.27e-07 | 73 |
neural tube | 7.02e-07 | 52 |
neural rod | 7.02e-07 | 52 |
future spinal cord | 7.02e-07 | 52 |
neural keel | 7.02e-07 | 52 |
regional part of nervous system | 7.03e-07 | 54 |
embryo | 8.78e-07 | 320 |